Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS00745

Experiment: D-Galactose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR87_RS00740 and ABZR87_RS00745 are separated by 156 nucleotidesABZR87_RS00745 and ABZR87_RS00750 are separated by 14 nucleotides ABZR87_RS00740: ABZR87_RS00740 - adenylate kinase, at 149,556 to 150,224 _RS00740 ABZR87_RS00745: ABZR87_RS00745 - 3-hydroxyacyl-CoA dehydrogenase, at 150,381 to 151,139 _RS00745 ABZR87_RS00750: ABZR87_RS00750 - LysR family transcriptional regulator, at 151,154 to 152,047 _RS00750 Position (kb) 150 151 152Strain fitness (log2 ratio) -1 0 1at 149.389 kb on + strandat 149.414 kb on + strandat 149.464 kb on + strandat 150.308 kb on + strandat 150.309 kb on - strandat 150.313 kb on + strandat 150.313 kb on + strandat 150.313 kb on + strandat 150.313 kb on + strandat 150.313 kb on + strandat 150.313 kb on + strandat 150.313 kb on + strandat 150.313 kb on + strandat 150.313 kb on + strandat 150.313 kb on + strandat 150.314 kb on - strandat 150.314 kb on - strandat 150.314 kb on - strandat 150.314 kb on - strandat 150.314 kb on - strandat 150.314 kb on - strandat 150.314 kb on - strandat 150.314 kb on - strandat 150.314 kb on - strandat 150.314 kb on - strandat 150.314 kb on - strandat 150.314 kb on - strandat 150.314 kb on - strandat 150.314 kb on - strandat 150.339 kb on - strandat 150.400 kb on + strandat 150.400 kb on + strandat 150.400 kb on + strandat 150.401 kb on - strandat 150.401 kb on - strandat 150.401 kb on - strandat 150.441 kb on - strandat 150.636 kb on - strand, within ABZR87_RS00745at 150.853 kb on - strand, within ABZR87_RS00745at 151.048 kb on - strand, within ABZR87_RS00745at 151.137 kb on + strandat 151.390 kb on + strand, within ABZR87_RS00750at 151.390 kb on + strand, within ABZR87_RS00750at 151.390 kb on + strand, within ABZR87_RS00750at 151.390 kb on + strand, within ABZR87_RS00750at 151.391 kb on - strand, within ABZR87_RS00750at 151.614 kb on - strand, within ABZR87_RS00750at 151.716 kb on + strand, within ABZR87_RS00750at 151.716 kb on + strand, within ABZR87_RS00750at 151.716 kb on + strand, within ABZR87_RS00750at 151.716 kb on + strand, within ABZR87_RS00750at 151.716 kb on + strand, within ABZR87_RS00750at 151.716 kb on + strand, within ABZR87_RS00750at 151.716 kb on + strand, within ABZR87_RS00750at 151.717 kb on - strand, within ABZR87_RS00750at 151.717 kb on - strand, within ABZR87_RS00750at 151.717 kb on - strand, within ABZR87_RS00750at 152.086 kb on - strandat 152.095 kb on - strandat 152.110 kb on + strandat 152.111 kb on - strandat 152.117 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Galactose (C)
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149,389 + -0.8
149,414 + +0.9
149,464 + +0.2
150,308 + +0.2
150,309 - -0.0
150,313 + +0.2
150,313 + +0.6
150,313 + +0.4
150,313 + -0.9
150,313 + +0.2
150,313 + -0.6
150,313 + +0.4
150,313 + -0.4
150,313 + -0.3
150,313 + +0.2
150,314 - +0.3
150,314 - -0.0
150,314 - -0.4
150,314 - +0.4
150,314 - -0.2
150,314 - +0.4
150,314 - +0.2
150,314 - +0.6
150,314 - -0.7
150,314 - -0.2
150,314 - -0.1
150,314 - +0.2
150,314 - -1.0
150,314 - +0.6
150,339 - -1.6
150,400 + -0.1
150,400 + +1.0
150,400 + -0.3
150,401 - +0.4
150,401 - -0.7
150,401 - +0.9
150,441 - -0.4
150,636 - ABZR87_RS00745 0.34 -0.2
150,853 - ABZR87_RS00745 0.62 -1.2
151,048 - ABZR87_RS00745 0.88 -1.2
151,137 + +0.4
151,390 + ABZR87_RS00750 0.26 +0.4
151,390 + ABZR87_RS00750 0.26 -0.0
151,390 + ABZR87_RS00750 0.26 -1.0
151,390 + ABZR87_RS00750 0.26 -0.4
151,391 - ABZR87_RS00750 0.27 +0.5
151,614 - ABZR87_RS00750 0.51 -0.8
151,716 + ABZR87_RS00750 0.63 -1.4
151,716 + ABZR87_RS00750 0.63 -0.1
151,716 + ABZR87_RS00750 0.63 -0.3
151,716 + ABZR87_RS00750 0.63 +0.7
151,716 + ABZR87_RS00750 0.63 +0.1
151,716 + ABZR87_RS00750 0.63 -0.7
151,716 + ABZR87_RS00750 0.63 +0.3
151,717 - ABZR87_RS00750 0.63 -0.4
151,717 - ABZR87_RS00750 0.63 -0.7
151,717 - ABZR87_RS00750 0.63 -0.5
152,086 - -0.5
152,095 - +0.1
152,110 + +0.9
152,111 - +0.1
152,117 + -0.9

Or see this region's nucleotide sequence