Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS10755

Experiment: R2A with Aluminum chloride 3.125 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Aluminum chloride 3.125 mM
2,378,190	+		LRK54_RS10745	0.27	+1.7
2,378,190	+		LRK54_RS10745	0.27	+0.4
2,378,190	+		LRK54_RS10745	0.27	+0.1
2,378,190	+		LRK54_RS10745	0.27	-0.4
2,378,190	+		LRK54_RS10745	0.27	+1.8
2,378,191	-		LRK54_RS10745	0.27	+0.1
2,378,191	-		LRK54_RS10745	0.27	+0.1
2,378,191	-		LRK54_RS10745	0.27	+1.4
2,378,208	+		LRK54_RS10745	0.29	-0.2
2,378,208	+		LRK54_RS10745	0.29	-0.7
2,378,208	+		LRK54_RS10745	0.29	-1.8
2,378,208	+		LRK54_RS10745	0.29	-0.2
2,378,208	+		LRK54_RS10745	0.29	-1.2
2,378,209	-		LRK54_RS10745	0.29	+0.1
2,378,209	-		LRK54_RS10745	0.29	+0.0
2,378,209	-		LRK54_RS10745	0.29	-0.6
2,378,209	-		LRK54_RS10745	0.29	+0.4
2,378,209	-		LRK54_RS10745	0.29	+0.0
2,378,628	+		LRK54_RS10745	0.75	+0.7
2,378,629	-		LRK54_RS10745	0.75	+1.4
2,378,688	+		LRK54_RS10745	0.81	-0.7
2,378,688	+		LRK54_RS10745	0.81	+0.6
2,378,688	+		LRK54_RS10745	0.81	-0.9
2,378,688	+		LRK54_RS10745	0.81	+0.3
2,378,688	+		LRK54_RS10745	0.81	+0.4
2,378,688	+		LRK54_RS10745	0.81	-0.8
2,378,688	+		LRK54_RS10745	0.81	+0.1
2,378,688	+		LRK54_RS10745	0.81	-0.3
2,378,688	+		LRK54_RS10745	0.81	+0.7
2,378,688	+		LRK54_RS10745	0.81	-0.2
2,378,688	+		LRK54_RS10745	0.81	-1.0
2,378,689	-		LRK54_RS10745	0.81	-0.3
2,378,689	-		LRK54_RS10745	0.81	-0.4
2,378,689	-		LRK54_RS10745	0.81	+1.4
2,378,689	-		LRK54_RS10745	0.81	+0.2
2,378,689	-		LRK54_RS10745	0.81	-0.6
2,378,689	-		LRK54_RS10745	0.81	-1.7
2,378,689	-		LRK54_RS10745	0.81	+0.6
2,378,689	-		LRK54_RS10745	0.81	-0.3
2,378,689	-		LRK54_RS10745	0.81	-0.2
2,378,689	-		LRK54_RS10745	0.81	+0.7
2,378,689	-		LRK54_RS10745	0.81	-1.0
2,378,689	-		LRK54_RS10745	0.81	-2.1
2,378,689	-		LRK54_RS10745	0.81	-0.6
2,378,689	-		LRK54_RS10745	0.81	-1.2
2,378,689	-		LRK54_RS10745	0.81	-0.3
2,378,689	-		LRK54_RS10745	0.81	-0.4
2,378,689	-		LRK54_RS10745	0.81	-0.8
2,378,689	-		LRK54_RS10745	0.81	-2.1
2,378,689	-		LRK54_RS10745	0.81	-0.6
2,378,689	-		LRK54_RS10745	0.81	-0.8
2,378,689	-		LRK54_RS10745	0.81	-0.3
2,378,689	-		LRK54_RS10745	0.81	+0.2
2,378,689	-		LRK54_RS10745	0.81	-0.4
2,378,689	-		LRK54_RS10745	0.81	+0.1
2,378,882	+				+0.0
2,378,882	+				-1.2
2,378,882	+				-0.2
2,378,882	+				+0.4
2,378,882	+				-0.6
2,378,882	+				+0.2
2,378,882	+				-0.8
2,378,882	+				-0.0
2,378,882	+				-0.9
2,378,882	+				+0.0
2,378,882	+				+0.4
2,378,882	+				-0.7
2,378,882	+				+1.4
2,378,882	+				-1.3
2,378,882	+				-1.4
2,378,882	+				-1.7
2,378,882	+				-0.2
2,378,882	+				+0.2
2,378,882	+				+1.1
2,378,882	+				-0.5
2,378,882	+				-0.3
2,378,882	+				-0.0
2,378,882	+				+1.8
2,378,882	+				-0.8
2,378,882	+				-0.9
2,378,882	+				+0.4
2,378,882	+				+1.2
2,378,882	+				+0.6
2,378,882	+				+2.4
2,378,882	+				+0.4
2,378,882	+				+0.6
2,378,883	-				-0.5
2,378,883	-				-0.8
2,378,883	-				-1.7
2,378,883	-				+0.1
2,378,883	-				-0.5
2,378,883	-				+1.4
2,378,883	-				+0.1
2,378,883	-				+1.1
2,378,883	-				+0.6
2,378,883	-				-0.3
2,378,883	-				+0.1
2,378,883	-				+0.2
2,378,883	-				+0.9
2,378,883	-				+1.0
2,378,883	-				+0.2
2,378,883	-				-1.3
2,378,883	-				+1.2
2,378,883	-				+0.2
2,378,883	-				-1.8
2,378,883	-				+0.8
2,378,883	-				-1.5
2,378,883	-				-0.2
2,378,883	-				-0.5
2,378,883	-				-0.6
2,378,992	+		LRK54_RS10750	0.40	+0.4
2,378,992	+		LRK54_RS10750	0.40	-1.3
2,378,993	-		LRK54_RS10750	0.40	-0.1
2,378,993	-		LRK54_RS10750	0.40	+0.5
2,379,013	+		LRK54_RS10750	0.47	+0.8
2,379,013	+		LRK54_RS10750	0.47	+0.8
2,379,013	+		LRK54_RS10750	0.47	+0.0
2,379,013	+		LRK54_RS10750	0.47	-0.1
2,379,013	+		LRK54_RS10750	0.47	-0.3
2,379,014	-		LRK54_RS10750	0.47	-0.2
2,379,014	-		LRK54_RS10750	0.47	-0.8
2,379,014	-		LRK54_RS10750	0.47	-1.8
2,379,014	-		LRK54_RS10750	0.47	-1.1
2,379,014	-		LRK54_RS10750	0.47	-0.3
2,379,014	-		LRK54_RS10750	0.47	-0.1
2,379,014	-		LRK54_RS10750	0.47	+0.4
2,379,014	-		LRK54_RS10750	0.47	-2.1
2,379,014	-		LRK54_RS10750	0.47	-1.1
2,379,014	-		LRK54_RS10750	0.47	+1.9
2,379,432	+		LRK54_RS10755	0.41	-1.2
2,379,432	+		LRK54_RS10755	0.41	-0.1
2,379,433	-		LRK54_RS10755	0.41	+0.5
2,379,433	-		LRK54_RS10755	0.41	+0.8
2,379,603	+		LRK54_RS10755	0.69	+0.7
2,379,604	-		LRK54_RS10755	0.69	+1.6
2,379,604	-		LRK54_RS10755	0.69	-1.5
2,379,690	+		LRK54_RS10755	0.83	-0.2
2,379,690	+		LRK54_RS10755	0.83	-0.2
2,379,690	+		LRK54_RS10755	0.83	-0.6
2,379,690	+		LRK54_RS10755	0.83	+0.1
2,379,690	+		LRK54_RS10755	0.83	+0.1
2,379,690	+		LRK54_RS10755	0.83	-1.4
2,379,690	+		LRK54_RS10755	0.83	-0.0
2,379,690	+		LRK54_RS10755	0.83	-1.1
2,379,690	+		LRK54_RS10755	0.83	-0.7
2,379,690	+		LRK54_RS10755	0.83	-0.3
2,379,690	+		LRK54_RS10755	0.83	-0.4
2,379,690	+		LRK54_RS10755	0.83	+0.5
2,379,690	+		LRK54_RS10755	0.83	+0.3
2,379,690	+		LRK54_RS10755	0.83	+0.6
2,379,690	+		LRK54_RS10755	0.83	-0.5
2,379,690	+		LRK54_RS10755	0.83	-1.8
2,379,690	+		LRK54_RS10755	0.83	-1.6
2,379,690	+		LRK54_RS10755	0.83	-1.2
2,379,690	+		LRK54_RS10755	0.83	-1.6
2,379,690	+		LRK54_RS10755	0.83	+0.2
2,379,690	+		LRK54_RS10755	0.83	-0.8
2,379,690	+		LRK54_RS10755	0.83	-3.0
2,379,690	+		LRK54_RS10755	0.83	+0.4
2,379,690	+		LRK54_RS10755	0.83	+0.3
2,379,690	+		LRK54_RS10755	0.83	+0.5
2,379,690	+		LRK54_RS10755	0.83	-0.2
2,379,690	+		LRK54_RS10755	0.83	-0.1
2,379,690	+		LRK54_RS10755	0.83	+0.8
2,379,690	+		LRK54_RS10755	0.83	-0.9
2,379,690	+		LRK54_RS10755	0.83	-1.0
2,379,691	-		LRK54_RS10755	0.83	-1.1
2,379,691	-		LRK54_RS10755	0.83	-2.1
2,379,691	-		LRK54_RS10755	0.83	-0.8
2,379,691	-		LRK54_RS10755	0.83	-0.1
2,379,691	-		LRK54_RS10755	0.83	-0.7
2,379,691	-		LRK54_RS10755	0.83	+0.4
2,379,691	-		LRK54_RS10755	0.83	-0.7
2,379,691	-		LRK54_RS10755	0.83	+0.4
2,379,691	-		LRK54_RS10755	0.83	-0.2
2,379,691	-		LRK54_RS10755	0.83	-0.6
2,379,691	-		LRK54_RS10755	0.83	+0.6
2,379,691	-		LRK54_RS10755	0.83	-0.2
2,379,691	-		LRK54_RS10755	0.83	-1.1
2,379,691	-		LRK54_RS10755	0.83	+0.9
2,379,691	-		LRK54_RS10755	0.83	+0.8
2,379,691	-		LRK54_RS10755	0.83	-0.9
2,379,691	-		LRK54_RS10755	0.83	-0.5
2,379,691	-		LRK54_RS10755	0.83	+1.7
2,379,691	-		LRK54_RS10755	0.83	-0.9
2,379,691	-		LRK54_RS10755	0.83	-0.9
2,379,696	+		LRK54_RS10755	0.84	-0.8
2,379,696	+		LRK54_RS10755	0.84	-0.7
2,379,696	+		LRK54_RS10755	0.84	-0.3
2,379,696	+		LRK54_RS10755	0.84	-1.0
2,379,696	+		LRK54_RS10755	0.84	-0.2
2,379,696	+		LRK54_RS10755	0.84	+0.9
2,379,696	+		LRK54_RS10755	0.84	+0.1
2,379,696	+		LRK54_RS10755	0.84	-0.7
2,379,696	+		LRK54_RS10755	0.84	+1.1
2,379,696	+		LRK54_RS10755	0.84	-0.3
2,379,697	-		LRK54_RS10755	0.84	+1.4
2,379,697	-		LRK54_RS10755	0.84	+0.4
2,379,697	-		LRK54_RS10755	0.84	-0.7
2,379,697	-		LRK54_RS10755	0.84	-0.5
2,379,697	-		LRK54_RS10755	0.84	-1.7
2,379,697	-		LRK54_RS10755	0.84	+0.5
2,379,774	+				+1.3
2,379,774	+				-0.2
2,379,774	+				-0.1
2,379,774	+				+0.4
2,379,774	+				+0.4
2,379,774	+				+0.4
2,379,774	+				+1.0
2,379,774	+				-0.2
2,379,775	-				-0.8
2,379,775	-				+0.3
2,379,775	-				-0.2
2,379,775	-				-1.1
2,379,775	-				-0.1
2,379,775	-				+0.5
2,379,775	-				-1.0
2,379,775	-				-0.6
2,379,775	-				-0.9
2,379,786	+				-0.7
2,379,786	+				-1.6
2,379,786	+				-0.1
2,379,786	+				+2.5
2,379,786	+				+0.9
2,379,787	-				-1.4
2,379,787	-				+1.6
2,379,787	-				-0.6
2,379,787	-				-2.5
2,379,787	-				+1.2
2,379,787	-				-1.5
2,379,871	+		LRK54_RS10760	0.24	+0.8
2,379,871	+		LRK54_RS10760	0.24	-0.8
2,379,871	+		LRK54_RS10760	0.24	-0.3
2,379,871	+		LRK54_RS10760	0.24	-0.5
2,379,871	+		LRK54_RS10760	0.24	+0.2
2,379,871	+		LRK54_RS10760	0.24	-0.2
2,379,871	+		LRK54_RS10760	0.24	+0.3
2,379,871	+		LRK54_RS10760	0.24	+1.4
2,379,872	-		LRK54_RS10760	0.24	-0.0
2,379,872	-		LRK54_RS10760	0.24	-1.3
2,379,872	-		LRK54_RS10760	0.24	-1.1
2,379,872	-		LRK54_RS10760	0.24	+1.0
2,380,109	+				+2.1
2,380,109	+				+0.2
2,380,109	+				-1.1
2,380,109	+				+0.2
2,380,109	+				+0.4
2,380,109	+				+0.7
2,380,109	+				+0.1
2,380,110	-				-0.8
2,380,110	-				-0.6
2,380,110	-				+0.8
2,380,110	-				-0.9
2,380,110	-				-1.7
2,380,110	-				-0.0
2,380,110	-				-2.4
2,380,110	-				+0.2
2,380,110	-				+0.4
2,380,110	-				+0.2
2,380,110	-				+1.4
2,380,110	-				+1.0
2,380,110	-				+0.1
2,380,110	-				+0.3
2,380,110	-				-0.1
2,380,110	-				+0.1
2,380,110	-				+0.7
2,380,110	-				-2.0
2,380,155	+				+0.3
2,380,155	+				-0.5
2,380,156	-				+0.6
2,380,156	-				+1.1
2,380,156	-				+0.1
2,380,156	-				+0.2
2,380,156	-				-0.3
2,380,156	-				+0.3
2,380,164	+				-1.7
2,380,164	+				+0.8
2,380,164	+				-0.8
2,380,164	+				-0.9
2,380,164	+				-1.2
2,380,164	+				+0.0
2,380,165	-				+0.8
2,380,165	-				+1.4
2,380,165	-				+0.3
2,380,165	-				+1.1
2,380,165	-				-2.1
2,380,165	-				-2.2
2,380,165	-				-1.3
2,380,165	-				+0.9
2,380,165	-				-0.2
2,380,165	-				-0.7