Experiment: L-Malic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS02620 and HSERO_RS02625 are separated by 292 nucleotides HSERO_RS02625 and HSERO_RS02630 are separated by 266 nucleotides HSERO_RS02630 and HSERO_RS02635 are separated by 2 nucleotides
HSERO_RS02620: HSERO_RS02620 - cobalt transporter, at 573,802 to 574,719
_RS02620
HSERO_RS02625: HSERO_RS02625 - hypothetical protein, at 575,012 to 576,406
_RS02625
HSERO_RS02630: HSERO_RS02630 - membrane protein, at 576,673 to 577,254
_RS02630
HSERO_RS02635: HSERO_RS02635 - LysR family transcriptional regulator, at 577,257 to 578,177
_RS02635
Position (kb) 575
576
577 Strain fitness (log2 ratio) -2
-1
0
1 at 574.017 kb on - strand, within HSERO_RS02620 at 574.027 kb on - strand, within HSERO_RS02620 at 574.037 kb on - strand, within HSERO_RS02620 at 574.106 kb on - strand, within HSERO_RS02620 at 574.195 kb on + strand, within HSERO_RS02620 at 574.286 kb on - strand, within HSERO_RS02620 at 574.363 kb on - strand, within HSERO_RS02620 at 574.678 kb on + strand at 574.784 kb on + strand at 574.833 kb on + strand at 574.985 kb on - strand at 575.066 kb on - strand at 575.116 kb on + strand at 575.124 kb on - strand at 575.140 kb on - strand at 575.158 kb on - strand, within HSERO_RS02625 at 575.298 kb on + strand, within HSERO_RS02625 at 575.305 kb on + strand, within HSERO_RS02625 at 575.726 kb on - strand, within HSERO_RS02625 at 575.747 kb on - strand, within HSERO_RS02625 at 575.878 kb on + strand, within HSERO_RS02625 at 575.885 kb on + strand, within HSERO_RS02625 at 575.949 kb on + strand, within HSERO_RS02625 at 575.962 kb on - strand, within HSERO_RS02625 at 576.051 kb on + strand, within HSERO_RS02625 at 576.059 kb on - strand, within HSERO_RS02625 at 576.131 kb on + strand, within HSERO_RS02625 at 576.418 kb on - strand at 576.451 kb on + strand at 576.451 kb on + strand at 576.459 kb on - strand at 576.908 kb on + strand, within HSERO_RS02630 at 576.971 kb on - strand, within HSERO_RS02630 at 577.095 kb on - strand, within HSERO_RS02630 at 577.203 kb on - strand at 577.278 kb on + strand at 577.363 kb on + strand, within HSERO_RS02635
Per-strain Table
Position Strand Gene LocusTag Fraction L-Malic (C) remove 574,017 - HSERO_RS02620 0.23 -0.3 574,027 - HSERO_RS02620 0.25 -0.7 574,037 - HSERO_RS02620 0.26 +0.3 574,106 - HSERO_RS02620 0.33 -0.1 574,195 + HSERO_RS02620 0.43 -0.1 574,286 - HSERO_RS02620 0.53 +0.1 574,363 - HSERO_RS02620 0.61 -0.5 574,678 + -1.1 574,784 + -0.3 574,833 + +0.3 574,985 - +0.1 575,066 - -1.7 575,116 + +0.1 575,124 - -0.2 575,140 - +0.8 575,158 - HSERO_RS02625 0.10 +0.2 575,298 + HSERO_RS02625 0.21 +1.1 575,305 + HSERO_RS02625 0.21 -0.5 575,726 - HSERO_RS02625 0.51 +0.6 575,747 - HSERO_RS02625 0.53 +0.6 575,878 + HSERO_RS02625 0.62 -1.3 575,885 + HSERO_RS02625 0.63 +0.2 575,949 + HSERO_RS02625 0.67 -1.8 575,962 - HSERO_RS02625 0.68 +1.6 576,051 + HSERO_RS02625 0.74 +0.2 576,059 - HSERO_RS02625 0.75 +0.6 576,131 + HSERO_RS02625 0.80 +1.6 576,418 - +1.7 576,451 + -0.5 576,451 + +1.1 576,459 - +0.0 576,908 + HSERO_RS02630 0.40 -0.3 576,971 - HSERO_RS02630 0.51 -0.3 577,095 - HSERO_RS02630 0.73 -1.1 577,203 - -0.2 577,278 + +0.3 577,363 + HSERO_RS02635 0.12 -0.6
Or see this region's nucleotide sequence