Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS07960
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB |
---|---|---|---|---|---|
remove | |||||
1,810,664 | - | BPHYT_RS07950 | 0.84 | +0.4 | |
1,810,664 | - | BPHYT_RS07950 | 0.84 | +0.3 | |
1,810,817 | + | +0.4 | |||
1,810,817 | + | -0.3 | |||
1,810,818 | - | +0.0 | |||
1,810,818 | - | -2.4 | |||
1,810,822 | - | +0.1 | |||
1,810,822 | - | +0.3 | |||
1,810,853 | - | +0.0 | |||
1,810,892 | - | -0.2 | |||
1,810,893 | + | +0.4 | |||
1,811,339 | - | -0.1 | |||
1,811,377 | + | +0.1 | |||
1,811,378 | - | -0.2 | |||
1,811,673 | + | BPHYT_RS07960 | 0.43 | -0.2 | |
1,811,675 | + | BPHYT_RS07960 | 0.44 | -0.2 | |
1,811,791 | - | -0.1 | |||
1,812,088 | - | BPHYT_RS07965 | 0.10 | -0.5 | |
1,812,692 | - | BPHYT_RS07965 | 0.34 | -0.1 |
Or see this region's nucleotide sequence