Experiment: Cisplatin 0.0032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_27955 and AO356_27960 are separated by 90 nucleotides AO356_27960 and AO356_27965 are separated by 71 nucleotides AO356_27965 and AO356_27970 are separated by 285 nucleotides
AO356_27955: AO356_27955 - hypothetical protein, at 6,380,813 to 6,382,462
_27955
AO356_27960: AO356_27960 - 3-alpha-hydroxysteroid dehydrogenase, at 6,382,553 to 6,383,320
_27960
AO356_27965: AO356_27965 - benzaldehyde dehydrogenase, at 6,383,392 to 6,384,864
_27965
AO356_27970: AO356_27970 - Fis family transcriptional regulator, at 6,385,150 to 6,386,925
_27970
Position (kb)
6383
6384
6385 Strain fitness (log2 ratio)
-1
0
1 at 6382.399 kb on + strand at 6382.444 kb on + strand at 6382.560 kb on + strand at 6382.561 kb on - strand at 6382.561 kb on - strand at 6382.662 kb on + strand, within AO356_27960 at 6382.815 kb on + strand, within AO356_27960 at 6382.815 kb on + strand, within AO356_27960 at 6382.816 kb on - strand, within AO356_27960 at 6382.852 kb on - strand, within AO356_27960 at 6383.046 kb on + strand, within AO356_27960 at 6383.046 kb on + strand, within AO356_27960 at 6383.046 kb on + strand, within AO356_27960 at 6383.047 kb on - strand, within AO356_27960 at 6383.448 kb on - strand at 6384.186 kb on + strand, within AO356_27965 at 6384.187 kb on - strand, within AO356_27965 at 6384.866 kb on + strand at 6384.866 kb on + strand at 6384.866 kb on + strand at 6384.866 kb on + strand at 6384.867 kb on - strand at 6384.867 kb on - strand at 6385.094 kb on + strand at 6385.095 kb on - strand at 6385.095 kb on - strand at 6385.101 kb on + strand at 6385.156 kb on - strand at 6385.156 kb on - strand at 6385.299 kb on + strand at 6385.299 kb on + strand at 6385.577 kb on - strand, within AO356_27970 at 6385.676 kb on - strand, within AO356_27970 at 6385.816 kb on + strand, within AO356_27970
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.0032 mg/ml remove 6,382,399 + +0.5 6,382,444 + +1.7 6,382,560 + +0.3 6,382,561 - +0.3 6,382,561 - +1.4 6,382,662 + AO356_27960 0.14 -0.1 6,382,815 + AO356_27960 0.34 +0.3 6,382,815 + AO356_27960 0.34 -0.9 6,382,816 - AO356_27960 0.34 +1.2 6,382,852 - AO356_27960 0.39 +1.0 6,383,046 + AO356_27960 0.64 +0.4 6,383,046 + AO356_27960 0.64 +0.3 6,383,046 + AO356_27960 0.64 +1.0 6,383,047 - AO356_27960 0.64 +0.3 6,383,448 - -0.2 6,384,186 + AO356_27965 0.54 -1.3 6,384,187 - AO356_27965 0.54 -0.3 6,384,866 + +1.1 6,384,866 + +0.4 6,384,866 + +0.4 6,384,866 + -0.5 6,384,867 - -0.3 6,384,867 - +0.4 6,385,094 + -0.3 6,385,095 - -0.6 6,385,095 - +1.0 6,385,101 + -0.6 6,385,156 - -0.9 6,385,156 - +0.1 6,385,299 + -0.5 6,385,299 + +1.2 6,385,577 - AO356_27970 0.24 +0.4 6,385,676 - AO356_27970 0.30 +0.2 6,385,816 + AO356_27970 0.38 -0.3
Or see this region's nucleotide sequence