Experiment: Cisplatin 0.0032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_27445 and AO356_27450 are separated by 288 nucleotides AO356_27450 and AO356_27455 are separated by 120 nucleotides
AO356_27445: AO356_27445 - IclR family transcriptional regulator, at 6,253,521 to 6,254,327
_27445
AO356_27450: AO356_27450 - fumarylacetoacetate hydrolase, at 6,254,616 to 6,255,794
_27450
AO356_27455: AO356_27455 - LysR family transcriptional regulator, at 6,255,915 to 6,256,901
_27455
Position (kb)
6254
6255
6256 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 6253.919 kb on - strand, within AO356_27445 at 6253.952 kb on - strand, within AO356_27445 at 6253.956 kb on - strand, within AO356_27445 at 6253.956 kb on - strand, within AO356_27445 at 6253.956 kb on - strand, within AO356_27445 at 6254.098 kb on - strand, within AO356_27445 at 6254.098 kb on - strand, within AO356_27445 at 6254.098 kb on - strand, within AO356_27445 at 6254.098 kb on - strand, within AO356_27445 at 6254.098 kb on - strand, within AO356_27445 at 6254.098 kb on - strand, within AO356_27445 at 6254.510 kb on + strand at 6254.510 kb on + strand at 6254.614 kb on - strand at 6254.617 kb on + strand at 6254.618 kb on - strand at 6254.618 kb on - strand at 6254.618 kb on - strand at 6254.692 kb on + strand at 6254.692 kb on + strand at 6254.693 kb on - strand at 6254.756 kb on + strand, within AO356_27450 at 6254.756 kb on + strand, within AO356_27450 at 6254.756 kb on + strand, within AO356_27450 at 6254.757 kb on - strand, within AO356_27450 at 6254.762 kb on + strand, within AO356_27450 at 6254.984 kb on + strand, within AO356_27450 at 6254.985 kb on - strand, within AO356_27450 at 6254.985 kb on - strand, within AO356_27450 at 6255.290 kb on + strand, within AO356_27450 at 6255.290 kb on + strand, within AO356_27450 at 6255.290 kb on + strand, within AO356_27450 at 6255.291 kb on - strand, within AO356_27450 at 6255.291 kb on - strand, within AO356_27450 at 6255.291 kb on - strand, within AO356_27450 at 6255.574 kb on + strand, within AO356_27450 at 6255.833 kb on + strand at 6255.932 kb on + strand at 6255.933 kb on - strand at 6255.933 kb on - strand at 6255.986 kb on + strand at 6255.986 kb on + strand at 6255.986 kb on + strand at 6255.987 kb on - strand at 6255.987 kb on - strand at 6255.987 kb on - strand at 6255.987 kb on - strand at 6256.056 kb on - strand, within AO356_27455 at 6256.056 kb on - strand, within AO356_27455 at 6256.148 kb on - strand, within AO356_27455 at 6256.164 kb on - strand, within AO356_27455 at 6256.234 kb on + strand, within AO356_27455 at 6256.235 kb on - strand, within AO356_27455 at 6256.539 kb on + strand, within AO356_27455 at 6256.540 kb on - strand, within AO356_27455 at 6256.540 kb on - strand, within AO356_27455 at 6256.540 kb on - strand, within AO356_27455 at 6256.764 kb on + strand, within AO356_27455 at 6256.772 kb on + strand, within AO356_27455 at 6256.773 kb on - strand, within AO356_27455
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.0032 mg/ml remove 6,253,919 - AO356_27445 0.49 -1.2 6,253,952 - AO356_27445 0.53 -0.4 6,253,956 - AO356_27445 0.54 +0.6 6,253,956 - AO356_27445 0.54 +0.7 6,253,956 - AO356_27445 0.54 -0.3 6,254,098 - AO356_27445 0.71 +0.8 6,254,098 - AO356_27445 0.71 +0.2 6,254,098 - AO356_27445 0.71 -0.2 6,254,098 - AO356_27445 0.71 -1.1 6,254,098 - AO356_27445 0.71 +1.0 6,254,098 - AO356_27445 0.71 +0.1 6,254,510 + -2.7 6,254,510 + -0.4 6,254,614 - +0.4 6,254,617 + -1.1 6,254,618 - -0.2 6,254,618 - +0.2 6,254,618 - +0.3 6,254,692 + -1.4 6,254,692 + +1.0 6,254,693 - -0.4 6,254,756 + AO356_27450 0.12 -0.1 6,254,756 + AO356_27450 0.12 -0.1 6,254,756 + AO356_27450 0.12 -0.4 6,254,757 - AO356_27450 0.12 -0.5 6,254,762 + AO356_27450 0.12 +0.5 6,254,984 + AO356_27450 0.31 +0.1 6,254,985 - AO356_27450 0.31 +0.5 6,254,985 - AO356_27450 0.31 -1.1 6,255,290 + AO356_27450 0.57 -0.5 6,255,290 + AO356_27450 0.57 -1.4 6,255,290 + AO356_27450 0.57 +0.0 6,255,291 - AO356_27450 0.57 +0.6 6,255,291 - AO356_27450 0.57 -0.7 6,255,291 - AO356_27450 0.57 -1.1 6,255,574 + AO356_27450 0.81 +0.7 6,255,833 + -1.0 6,255,932 + -0.4 6,255,933 - +1.8 6,255,933 - -1.1 6,255,986 + +0.4 6,255,986 + +0.3 6,255,986 + +1.2 6,255,987 - -0.1 6,255,987 - -0.6 6,255,987 - -1.0 6,255,987 - +0.2 6,256,056 - AO356_27455 0.14 -0.7 6,256,056 - AO356_27455 0.14 +1.6 6,256,148 - AO356_27455 0.24 +1.1 6,256,164 - AO356_27455 0.25 -1.4 6,256,234 + AO356_27455 0.32 -1.1 6,256,235 - AO356_27455 0.32 +0.0 6,256,539 + AO356_27455 0.63 +0.2 6,256,540 - AO356_27455 0.63 -1.0 6,256,540 - AO356_27455 0.63 +0.3 6,256,540 - AO356_27455 0.63 +0.5 6,256,764 + AO356_27455 0.86 -0.4 6,256,772 + AO356_27455 0.87 -0.9 6,256,773 - AO356_27455 0.87 -0.9
Or see this region's nucleotide sequence