Experiment: Cisplatin 0.0032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_27275 and AO356_27280 overlap by 4 nucleotides AO356_27280 and AO356_27285 are separated by 147 nucleotides AO356_27285 and AO356_27290 overlap by 1 nucleotides AO356_27290 and AO356_27295 are separated by 23 nucleotides
AO356_27275: AO356_27275 - histidine kinase, at 6,217,410 to 6,218,834
_27275
AO356_27280: AO356_27280 - XRE family transcriptional regulator, at 6,218,831 to 6,219,493
_27280
AO356_27285: AO356_27285 - hypothetical protein, at 6,219,641 to 6,219,907
_27285
AO356_27290: AO356_27290 - cytochrome B, at 6,219,907 to 6,220,452
_27290
AO356_27295: AO356_27295 - hypothetical protein, at 6,220,476 to 6,221,744
_27295
Position (kb)
6219
6220 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 6218.719 kb on + strand at 6218.720 kb on - strand at 6218.849 kb on + strand at 6218.849 kb on + strand at 6218.850 kb on - strand at 6218.850 kb on - strand at 6218.929 kb on + strand, within AO356_27280 at 6218.958 kb on + strand, within AO356_27280 at 6219.421 kb on - strand, within AO356_27280 at 6219.579 kb on + strand at 6219.813 kb on - strand, within AO356_27285 at 6219.821 kb on + strand, within AO356_27285 at 6219.821 kb on + strand, within AO356_27285 at 6219.821 kb on + strand, within AO356_27285 at 6219.822 kb on - strand, within AO356_27285 at 6219.822 kb on - strand, within AO356_27285 at 6219.897 kb on + strand at 6219.898 kb on - strand at 6219.898 kb on - strand at 6219.898 kb on - strand at 6219.988 kb on + strand, within AO356_27290 at 6219.988 kb on + strand, within AO356_27290 at 6219.989 kb on - strand, within AO356_27290 at 6219.989 kb on - strand, within AO356_27290 at 6220.037 kb on - strand, within AO356_27290 at 6220.037 kb on - strand, within AO356_27290 at 6220.451 kb on - strand at 6220.451 kb on - strand at 6220.451 kb on - strand at 6220.475 kb on + strand at 6220.549 kb on + strand at 6220.549 kb on + strand at 6220.549 kb on + strand at 6220.549 kb on + strand at 6220.550 kb on - strand at 6220.550 kb on - strand at 6220.550 kb on - strand at 6220.550 kb on - strand at 6220.609 kb on - strand, within AO356_27295 at 6220.732 kb on + strand, within AO356_27295 at 6220.732 kb on + strand, within AO356_27295 at 6220.733 kb on - strand, within AO356_27295 at 6220.733 kb on - strand, within AO356_27295 at 6220.733 kb on - strand, within AO356_27295 at 6220.830 kb on + strand, within AO356_27295 at 6220.830 kb on + strand, within AO356_27295 at 6220.831 kb on - strand, within AO356_27295 at 6220.893 kb on + strand, within AO356_27295 at 6220.894 kb on - strand, within AO356_27295 at 6220.894 kb on - strand, within AO356_27295
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.0032 mg/ml remove 6,218,719 + +0.1 6,218,720 - -0.6 6,218,849 + -0.4 6,218,849 + +0.5 6,218,850 - -0.1 6,218,850 - +0.0 6,218,929 + AO356_27280 0.15 +0.2 6,218,958 + AO356_27280 0.19 -0.4 6,219,421 - AO356_27280 0.89 +0.7 6,219,579 + +0.0 6,219,813 - AO356_27285 0.64 -0.1 6,219,821 + AO356_27285 0.67 -0.4 6,219,821 + AO356_27285 0.67 -0.9 6,219,821 + AO356_27285 0.67 +0.1 6,219,822 - AO356_27285 0.68 -1.4 6,219,822 - AO356_27285 0.68 -0.4 6,219,897 + +2.3 6,219,898 - -0.4 6,219,898 - -0.8 6,219,898 - -0.9 6,219,988 + AO356_27290 0.15 -0.4 6,219,988 + AO356_27290 0.15 -0.1 6,219,989 - AO356_27290 0.15 +0.5 6,219,989 - AO356_27290 0.15 +0.9 6,220,037 - AO356_27290 0.24 -0.9 6,220,037 - AO356_27290 0.24 +1.5 6,220,451 - -0.6 6,220,451 - -0.0 6,220,451 - +1.3 6,220,475 + +0.0 6,220,549 + -1.0 6,220,549 + -0.4 6,220,549 + +0.0 6,220,549 + +1.3 6,220,550 - -0.9 6,220,550 - -1.0 6,220,550 - -1.4 6,220,550 - +0.9 6,220,609 - AO356_27295 0.10 -1.1 6,220,732 + AO356_27295 0.20 -0.1 6,220,732 + AO356_27295 0.20 -1.0 6,220,733 - AO356_27295 0.20 +0.4 6,220,733 - AO356_27295 0.20 +0.1 6,220,733 - AO356_27295 0.20 -3.0 6,220,830 + AO356_27295 0.28 -0.7 6,220,830 + AO356_27295 0.28 -0.9 6,220,831 - AO356_27295 0.28 +0.9 6,220,893 + AO356_27295 0.33 +0.6 6,220,894 - AO356_27295 0.33 -0.5 6,220,894 - AO356_27295 0.33 -0.8
Or see this region's nucleotide sequence