Experiment: Cisplatin 0.0032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_27075 and AO356_27080 are separated by 677 nucleotides AO356_27080 and AO356_27085 are separated by 257 nucleotides
AO356_27075: AO356_27075 - hypothetical protein, at 6,172,815 to 6,174,305
_27075
AO356_27080: AO356_27080 - alcohol dehydrogenase, at 6,174,983 to 6,176,008
_27080
AO356_27085: AO356_27085 - LysR family transcriptional regulator, at 6,176,266 to 6,177,180
_27085
Position (kb)
6174
6175
6176
6177 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 6174.106 kb on - strand, within AO356_27075 at 6174.106 kb on - strand, within AO356_27075 at 6174.106 kb on - strand, within AO356_27075 at 6174.109 kb on + strand, within AO356_27075 at 6174.109 kb on + strand, within AO356_27075 at 6174.109 kb on + strand, within AO356_27075 at 6174.109 kb on + strand, within AO356_27075 at 6174.109 kb on + strand, within AO356_27075 at 6174.109 kb on + strand, within AO356_27075 at 6174.110 kb on - strand, within AO356_27075 at 6174.110 kb on - strand, within AO356_27075 at 6174.110 kb on - strand, within AO356_27075 at 6174.110 kb on - strand, within AO356_27075 at 6174.110 kb on - strand, within AO356_27075 at 6174.110 kb on - strand, within AO356_27075 at 6174.170 kb on + strand at 6174.258 kb on + strand at 6174.269 kb on - strand at 6174.445 kb on - strand at 6174.449 kb on - strand at 6174.577 kb on - strand at 6174.596 kb on - strand at 6174.635 kb on + strand at 6174.784 kb on - strand at 6174.981 kb on + strand at 6174.981 kb on + strand at 6174.982 kb on - strand at 6176.034 kb on - strand at 6176.062 kb on - strand at 6176.085 kb on - strand at 6176.085 kb on - strand at 6176.088 kb on - strand at 6176.088 kb on - strand at 6176.146 kb on + strand at 6176.165 kb on + strand at 6176.166 kb on - strand at 6176.166 kb on - strand at 6176.274 kb on + strand at 6176.274 kb on + strand at 6176.275 kb on - strand at 6176.677 kb on + strand, within AO356_27085 at 6176.677 kb on + strand, within AO356_27085 at 6176.677 kb on + strand, within AO356_27085 at 6176.677 kb on + strand, within AO356_27085 at 6176.678 kb on - strand, within AO356_27085 at 6176.678 kb on - strand, within AO356_27085 at 6176.678 kb on - strand, within AO356_27085 at 6176.678 kb on - strand, within AO356_27085 at 6176.678 kb on - strand, within AO356_27085 at 6176.731 kb on + strand, within AO356_27085 at 6176.731 kb on + strand, within AO356_27085 at 6176.732 kb on - strand, within AO356_27085 at 6176.920 kb on - strand, within AO356_27085 at 6177.007 kb on + strand, within AO356_27085 at 6177.008 kb on - strand, within AO356_27085 at 6177.008 kb on - strand, within AO356_27085
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.0032 mg/ml remove 6,174,106 - AO356_27075 0.87 -0.4 6,174,106 - AO356_27075 0.87 +0.5 6,174,106 - AO356_27075 0.87 -1.4 6,174,109 + AO356_27075 0.87 +0.8 6,174,109 + AO356_27075 0.87 +1.5 6,174,109 + AO356_27075 0.87 +0.4 6,174,109 + AO356_27075 0.87 +0.7 6,174,109 + AO356_27075 0.87 +0.3 6,174,109 + AO356_27075 0.87 +0.3 6,174,110 - AO356_27075 0.87 +0.8 6,174,110 - AO356_27075 0.87 -1.0 6,174,110 - AO356_27075 0.87 -0.4 6,174,110 - AO356_27075 0.87 +0.2 6,174,110 - AO356_27075 0.87 +0.0 6,174,110 - AO356_27075 0.87 -0.3 6,174,170 + -0.4 6,174,258 + -0.1 6,174,269 - +0.6 6,174,445 - +0.7 6,174,449 - +2.6 6,174,577 - -0.1 6,174,596 - +0.3 6,174,635 + -0.8 6,174,784 - -0.2 6,174,981 + +0.6 6,174,981 + +0.9 6,174,982 - -0.9 6,176,034 - -0.1 6,176,062 - -1.6 6,176,085 - -0.9 6,176,085 - -0.4 6,176,088 - -2.0 6,176,088 - -0.6 6,176,146 + +1.8 6,176,165 + -2.4 6,176,166 - -0.7 6,176,166 - -0.4 6,176,274 + -1.6 6,176,274 + +0.3 6,176,275 - -0.3 6,176,677 + AO356_27085 0.45 +0.2 6,176,677 + AO356_27085 0.45 -0.6 6,176,677 + AO356_27085 0.45 -0.9 6,176,677 + AO356_27085 0.45 -0.6 6,176,678 - AO356_27085 0.45 -0.3 6,176,678 - AO356_27085 0.45 +2.1 6,176,678 - AO356_27085 0.45 -0.6 6,176,678 - AO356_27085 0.45 +0.0 6,176,678 - AO356_27085 0.45 -0.5 6,176,731 + AO356_27085 0.51 -0.3 6,176,731 + AO356_27085 0.51 -2.9 6,176,732 - AO356_27085 0.51 -0.4 6,176,920 - AO356_27085 0.71 -1.6 6,177,007 + AO356_27085 0.81 -0.2 6,177,008 - AO356_27085 0.81 -0.1 6,177,008 - AO356_27085 0.81 +0.0
Or see this region's nucleotide sequence