Experiment: Cisplatin 0.0032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_27005 and AO356_27010 are separated by 169 nucleotides AO356_27010 and AO356_27015 are separated by 146 nucleotides
AO356_27005: AO356_27005 - polyurethanase, at 6,150,783 to 6,152,636
_27005
AO356_27010: AO356_27010 - serine protease, at 6,152,806 to 6,155,898
_27010
AO356_27015: AO356_27015 - peptidase, at 6,156,045 to 6,157,394
_27015
Position (kb)
6152
6153
6154
6155
6156 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 6151.939 kb on + strand, within AO356_27005 at 6151.939 kb on + strand, within AO356_27005 at 6151.939 kb on + strand, within AO356_27005 at 6151.940 kb on - strand, within AO356_27005 at 6151.940 kb on - strand, within AO356_27005 at 6151.940 kb on - strand, within AO356_27005 at 6151.940 kb on - strand, within AO356_27005 at 6151.940 kb on - strand, within AO356_27005 at 6151.954 kb on + strand, within AO356_27005 at 6152.114 kb on - strand, within AO356_27005 at 6152.126 kb on - strand, within AO356_27005 at 6152.126 kb on - strand, within AO356_27005 at 6152.257 kb on + strand, within AO356_27005 at 6152.257 kb on + strand, within AO356_27005 at 6152.552 kb on - strand at 6152.557 kb on + strand at 6152.557 kb on + strand at 6152.557 kb on + strand at 6152.557 kb on + strand at 6152.558 kb on - strand at 6152.620 kb on + strand at 6152.621 kb on - strand at 6152.621 kb on - strand at 6152.626 kb on + strand at 6152.626 kb on + strand at 6152.627 kb on - strand at 6152.627 kb on - strand at 6152.627 kb on - strand at 6152.627 kb on - strand at 6152.627 kb on - strand at 6152.627 kb on - strand at 6152.627 kb on - strand at 6152.630 kb on + strand at 6152.630 kb on + strand at 6152.784 kb on + strand at 6152.784 kb on + strand at 6152.784 kb on + strand at 6152.784 kb on + strand at 6152.785 kb on - strand at 6152.785 kb on - strand at 6152.873 kb on + strand at 6152.874 kb on - strand at 6152.874 kb on - strand at 6153.200 kb on + strand, within AO356_27010 at 6153.200 kb on + strand, within AO356_27010 at 6153.200 kb on + strand, within AO356_27010 at 6153.201 kb on - strand, within AO356_27010 at 6153.201 kb on - strand, within AO356_27010 at 6153.410 kb on + strand, within AO356_27010 at 6153.411 kb on - strand, within AO356_27010 at 6153.411 kb on - strand, within AO356_27010 at 6153.411 kb on - strand, within AO356_27010 at 6153.426 kb on - strand, within AO356_27010 at 6153.426 kb on - strand, within AO356_27010 at 6153.426 kb on - strand, within AO356_27010 at 6153.633 kb on + strand, within AO356_27010 at 6153.662 kb on + strand, within AO356_27010 at 6153.662 kb on + strand, within AO356_27010 at 6153.819 kb on - strand, within AO356_27010 at 6153.971 kb on + strand, within AO356_27010 at 6154.026 kb on + strand, within AO356_27010 at 6154.027 kb on - strand, within AO356_27010 at 6154.385 kb on + strand, within AO356_27010 at 6154.386 kb on - strand, within AO356_27010 at 6154.571 kb on + strand, within AO356_27010 at 6154.571 kb on + strand, within AO356_27010 at 6154.671 kb on - strand, within AO356_27010 at 6154.713 kb on + strand, within AO356_27010 at 6154.714 kb on - strand, within AO356_27010 at 6154.714 kb on - strand, within AO356_27010 at 6154.746 kb on + strand, within AO356_27010 at 6154.746 kb on + strand, within AO356_27010 at 6154.747 kb on - strand, within AO356_27010 at 6154.747 kb on - strand, within AO356_27010 at 6154.747 kb on - strand, within AO356_27010 at 6154.747 kb on - strand, within AO356_27010 at 6154.748 kb on + strand, within AO356_27010 at 6154.748 kb on + strand, within AO356_27010 at 6154.749 kb on - strand, within AO356_27010 at 6154.938 kb on + strand, within AO356_27010 at 6154.939 kb on - strand, within AO356_27010 at 6154.939 kb on - strand, within AO356_27010 at 6154.939 kb on - strand, within AO356_27010 at 6154.949 kb on + strand, within AO356_27010 at 6154.949 kb on + strand, within AO356_27010 at 6155.030 kb on + strand, within AO356_27010 at 6155.031 kb on - strand, within AO356_27010 at 6155.132 kb on + strand, within AO356_27010 at 6155.350 kb on - strand, within AO356_27010 at 6155.546 kb on + strand, within AO356_27010 at 6155.547 kb on - strand, within AO356_27010 at 6155.558 kb on + strand, within AO356_27010 at 6155.558 kb on + strand, within AO356_27010 at 6155.558 kb on + strand, within AO356_27010 at 6155.558 kb on + strand, within AO356_27010 at 6155.559 kb on - strand, within AO356_27010 at 6155.781 kb on - strand at 6155.912 kb on + strand at 6155.912 kb on + strand at 6155.912 kb on + strand at 6155.913 kb on - strand at 6155.913 kb on - strand at 6155.913 kb on - strand at 6156.041 kb on + strand at 6156.042 kb on - strand at 6156.121 kb on + strand at 6156.121 kb on + strand at 6156.122 kb on - strand at 6156.122 kb on - strand at 6156.149 kb on - strand at 6156.149 kb on - strand at 6156.187 kb on + strand, within AO356_27015 at 6156.187 kb on + strand, within AO356_27015 at 6156.187 kb on + strand, within AO356_27015 at 6156.187 kb on + strand, within AO356_27015 at 6156.188 kb on - strand, within AO356_27015 at 6156.188 kb on - strand, within AO356_27015 at 6156.188 kb on - strand, within AO356_27015 at 6156.188 kb on - strand, within AO356_27015 at 6156.188 kb on - strand, within AO356_27015 at 6156.258 kb on + strand, within AO356_27015 at 6156.386 kb on - strand, within AO356_27015 at 6156.449 kb on - strand, within AO356_27015 at 6156.449 kb on - strand, within AO356_27015 at 6156.490 kb on + strand, within AO356_27015 at 6156.490 kb on + strand, within AO356_27015 at 6156.502 kb on + strand, within AO356_27015 at 6156.503 kb on - strand, within AO356_27015 at 6156.510 kb on - strand, within AO356_27015 at 6156.510 kb on - strand, within AO356_27015 at 6156.639 kb on - strand, within AO356_27015 at 6156.750 kb on + strand, within AO356_27015
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.0032 mg/ml remove 6,151,939 + AO356_27005 0.62 -1.4 6,151,939 + AO356_27005 0.62 +1.2 6,151,939 + AO356_27005 0.62 -0.1 6,151,940 - AO356_27005 0.62 +1.1 6,151,940 - AO356_27005 0.62 -0.4 6,151,940 - AO356_27005 0.62 -1.1 6,151,940 - AO356_27005 0.62 -0.5 6,151,940 - AO356_27005 0.62 +0.7 6,151,954 + AO356_27005 0.63 -0.1 6,152,114 - AO356_27005 0.72 +0.9 6,152,126 - AO356_27005 0.72 +1.3 6,152,126 - AO356_27005 0.72 +1.3 6,152,257 + AO356_27005 0.80 +0.6 6,152,257 + AO356_27005 0.80 -1.0 6,152,552 - -0.4 6,152,557 + -1.0 6,152,557 + +0.2 6,152,557 + -1.7 6,152,557 + +0.9 6,152,558 - -0.4 6,152,620 + +0.1 6,152,621 - -1.4 6,152,621 - -0.4 6,152,626 + -0.2 6,152,626 + +0.5 6,152,627 - +0.6 6,152,627 - +0.8 6,152,627 - +0.3 6,152,627 - +0.4 6,152,627 - +0.2 6,152,627 - -0.2 6,152,627 - +2.3 6,152,630 + -2.0 6,152,630 + -0.2 6,152,784 + +0.8 6,152,784 + -1.0 6,152,784 + +1.5 6,152,784 + +0.1 6,152,785 - -2.4 6,152,785 - +0.6 6,152,873 + -0.4 6,152,874 - -1.0 6,152,874 - +0.3 6,153,200 + AO356_27010 0.13 -2.1 6,153,200 + AO356_27010 0.13 +0.5 6,153,200 + AO356_27010 0.13 -0.4 6,153,201 - AO356_27010 0.13 +0.8 6,153,201 - AO356_27010 0.13 +0.4 6,153,410 + AO356_27010 0.20 -0.6 6,153,411 - AO356_27010 0.20 +0.9 6,153,411 - AO356_27010 0.20 -0.8 6,153,411 - AO356_27010 0.20 -1.1 6,153,426 - AO356_27010 0.20 -0.6 6,153,426 - AO356_27010 0.20 +0.4 6,153,426 - AO356_27010 0.20 +0.6 6,153,633 + AO356_27010 0.27 +0.5 6,153,662 + AO356_27010 0.28 +0.9 6,153,662 + AO356_27010 0.28 -2.2 6,153,819 - AO356_27010 0.33 -0.1 6,153,971 + AO356_27010 0.38 -1.0 6,154,026 + AO356_27010 0.39 +0.2 6,154,027 - AO356_27010 0.39 -2.9 6,154,385 + AO356_27010 0.51 -0.2 6,154,386 - AO356_27010 0.51 -0.4 6,154,571 + AO356_27010 0.57 -1.1 6,154,571 + AO356_27010 0.57 +0.2 6,154,671 - AO356_27010 0.60 +0.5 6,154,713 + AO356_27010 0.62 -1.4 6,154,714 - AO356_27010 0.62 -0.0 6,154,714 - AO356_27010 0.62 +0.6 6,154,746 + AO356_27010 0.63 -0.4 6,154,746 + AO356_27010 0.63 +0.3 6,154,747 - AO356_27010 0.63 +0.3 6,154,747 - AO356_27010 0.63 -0.4 6,154,747 - AO356_27010 0.63 -0.2 6,154,747 - AO356_27010 0.63 -1.2 6,154,748 + AO356_27010 0.63 +0.2 6,154,748 + AO356_27010 0.63 -0.8 6,154,749 - AO356_27010 0.63 -1.0 6,154,938 + AO356_27010 0.69 -0.4 6,154,939 - AO356_27010 0.69 +1.7 6,154,939 - AO356_27010 0.69 +0.9 6,154,939 - AO356_27010 0.69 +1.6 6,154,949 + AO356_27010 0.69 -0.6 6,154,949 + AO356_27010 0.69 -0.3 6,155,030 + AO356_27010 0.72 +0.8 6,155,031 - AO356_27010 0.72 +0.1 6,155,132 + AO356_27010 0.75 +0.2 6,155,350 - AO356_27010 0.82 +0.7 6,155,546 + AO356_27010 0.89 -1.2 6,155,547 - AO356_27010 0.89 +0.0 6,155,558 + AO356_27010 0.89 +0.0 6,155,558 + AO356_27010 0.89 -0.9 6,155,558 + AO356_27010 0.89 +0.6 6,155,558 + AO356_27010 0.89 +1.3 6,155,559 - AO356_27010 0.89 -1.4 6,155,781 - +0.5 6,155,912 + -0.5 6,155,912 + -0.9 6,155,912 + -0.4 6,155,913 - -1.2 6,155,913 - +0.4 6,155,913 - -0.6 6,156,041 + -1.7 6,156,042 - -0.1 6,156,121 + +0.7 6,156,121 + +0.8 6,156,122 - -1.4 6,156,122 - +0.4 6,156,149 - +0.1 6,156,149 - +0.1 6,156,187 + AO356_27015 0.11 -0.4 6,156,187 + AO356_27015 0.11 -0.4 6,156,187 + AO356_27015 0.11 +0.2 6,156,187 + AO356_27015 0.11 -0.7 6,156,188 - AO356_27015 0.11 -0.4 6,156,188 - AO356_27015 0.11 -1.4 6,156,188 - AO356_27015 0.11 -1.4 6,156,188 - AO356_27015 0.11 -1.4 6,156,188 - AO356_27015 0.11 +0.9 6,156,258 + AO356_27015 0.16 -1.0 6,156,386 - AO356_27015 0.25 +0.9 6,156,449 - AO356_27015 0.30 +0.2 6,156,449 - AO356_27015 0.30 -0.1 6,156,490 + AO356_27015 0.33 +0.1 6,156,490 + AO356_27015 0.33 +0.9 6,156,502 + AO356_27015 0.34 -0.1 6,156,503 - AO356_27015 0.34 +0.2 6,156,510 - AO356_27015 0.34 -0.4 6,156,510 - AO356_27015 0.34 -0.9 6,156,639 - AO356_27015 0.44 +0.6 6,156,750 + AO356_27015 0.52 -2.4
Or see this region's nucleotide sequence