Experiment: Cisplatin 0.0032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_25430 and AO356_25435 are separated by 102 nucleotides AO356_25435 and AO356_25440 overlap by 4 nucleotides AO356_25440 and AO356_25445 are separated by 152 nucleotides AO356_25445 and AO356_25450 are separated by 36 nucleotides
AO356_25430: AO356_25430 - phosphatidylethanolamine-binding protein, at 5,750,933 to 5,751,472
_25430
AO356_25435: AO356_25435 - nodulation protein NolW, at 5,751,575 to 5,752,234
_25435
AO356_25440: AO356_25440 - histidine kinase, at 5,752,231 to 5,753,682
_25440
AO356_25445: AO356_25445 - hypothetical protein, at 5,753,835 to 5,754,116
_25445
AO356_25450: AO356_25450 - LysR family transcriptional regulator, at 5,754,153 to 5,755,094
_25450
Position (kb) 5752
5753
5754 Strain fitness (log2 ratio) -2
-1
0
1 at 5751.255 kb on + strand, within AO356_25430 at 5751.271 kb on - strand, within AO356_25430 at 5751.271 kb on - strand, within AO356_25430 at 5751.278 kb on - strand, within AO356_25430 at 5751.418 kb on - strand, within AO356_25430 at 5751.432 kb on - strand at 5751.510 kb on + strand at 5751.797 kb on + strand, within AO356_25435 at 5751.797 kb on + strand, within AO356_25435 at 5751.798 kb on - strand, within AO356_25435 at 5752.031 kb on + strand, within AO356_25435 at 5752.032 kb on - strand, within AO356_25435 at 5752.077 kb on + strand, within AO356_25435 at 5752.077 kb on + strand, within AO356_25435 at 5752.077 kb on + strand, within AO356_25435 at 5752.181 kb on - strand at 5752.182 kb on + strand at 5752.182 kb on + strand at 5752.182 kb on + strand at 5752.182 kb on + strand at 5752.183 kb on - strand at 5752.495 kb on + strand, within AO356_25440 at 5752.516 kb on + strand, within AO356_25440 at 5752.517 kb on - strand, within AO356_25440 at 5752.642 kb on - strand, within AO356_25440 at 5753.067 kb on + strand, within AO356_25440 at 5753.068 kb on - strand, within AO356_25440 at 5753.462 kb on + strand, within AO356_25440 at 5753.462 kb on + strand, within AO356_25440 at 5753.462 kb on + strand, within AO356_25440 at 5753.463 kb on - strand, within AO356_25440 at 5753.561 kb on + strand at 5753.561 kb on + strand at 5753.561 kb on + strand at 5753.562 kb on - strand at 5753.562 kb on - strand at 5753.562 kb on - strand at 5753.831 kb on + strand at 5753.831 kb on + strand at 5753.832 kb on - strand at 5753.836 kb on + strand at 5753.836 kb on + strand at 5753.836 kb on + strand at 5753.837 kb on - strand at 5753.859 kb on + strand at 5753.859 kb on + strand at 5753.866 kb on + strand, within AO356_25445 at 5753.867 kb on - strand, within AO356_25445 at 5753.972 kb on + strand, within AO356_25445 at 5753.972 kb on + strand, within AO356_25445 at 5753.974 kb on + strand, within AO356_25445 at 5753.974 kb on + strand, within AO356_25445 at 5753.975 kb on - strand, within AO356_25445 at 5753.975 kb on - strand, within AO356_25445 at 5753.975 kb on - strand, within AO356_25445 at 5753.975 kb on - strand, within AO356_25445 at 5753.976 kb on + strand, within AO356_25445 at 5754.054 kb on + strand, within AO356_25445 at 5754.152 kb on + strand at 5754.152 kb on + strand at 5754.152 kb on + strand at 5754.153 kb on - strand at 5754.489 kb on + strand, within AO356_25450
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.0032 mg/ml remove 5,751,255 + AO356_25430 0.60 -0.5 5,751,271 - AO356_25430 0.63 -0.1 5,751,271 - AO356_25430 0.63 +0.8 5,751,278 - AO356_25430 0.64 -0.6 5,751,418 - AO356_25430 0.90 +0.3 5,751,432 - +0.9 5,751,510 + -1.3 5,751,797 + AO356_25435 0.34 -0.4 5,751,797 + AO356_25435 0.34 +0.4 5,751,798 - AO356_25435 0.34 -1.3 5,752,031 + AO356_25435 0.69 -1.2 5,752,032 - AO356_25435 0.69 +0.4 5,752,077 + AO356_25435 0.76 -1.2 5,752,077 + AO356_25435 0.76 +1.3 5,752,077 + AO356_25435 0.76 +1.5 5,752,181 - +0.1 5,752,182 + -0.3 5,752,182 + +0.3 5,752,182 + +0.4 5,752,182 + -0.3 5,752,183 - +1.0 5,752,495 + AO356_25440 0.18 +1.3 5,752,516 + AO356_25440 0.20 -0.5 5,752,517 - AO356_25440 0.20 -0.0 5,752,642 - AO356_25440 0.28 -0.6 5,753,067 + AO356_25440 0.58 +0.1 5,753,068 - AO356_25440 0.58 -1.1 5,753,462 + AO356_25440 0.85 -0.9 5,753,462 + AO356_25440 0.85 -0.9 5,753,462 + AO356_25440 0.85 +0.2 5,753,463 - AO356_25440 0.85 -0.8 5,753,561 + -0.7 5,753,561 + +1.3 5,753,561 + -0.3 5,753,562 - -0.2 5,753,562 - +0.7 5,753,562 - -0.1 5,753,831 + -1.0 5,753,831 + +0.5 5,753,832 - -0.3 5,753,836 + -0.3 5,753,836 + -0.2 5,753,836 + -1.0 5,753,837 - -0.3 5,753,859 + -0.3 5,753,859 + +0.3 5,753,866 + AO356_25445 0.11 +0.2 5,753,867 - AO356_25445 0.11 +1.5 5,753,972 + AO356_25445 0.49 +0.0 5,753,972 + AO356_25445 0.49 +0.4 5,753,974 + AO356_25445 0.49 +0.5 5,753,974 + AO356_25445 0.49 -0.0 5,753,975 - AO356_25445 0.50 +0.5 5,753,975 - AO356_25445 0.50 +1.1 5,753,975 - AO356_25445 0.50 -0.8 5,753,975 - AO356_25445 0.50 -2.3 5,753,976 + AO356_25445 0.50 -0.4 5,754,054 + AO356_25445 0.78 +1.1 5,754,152 + +0.0 5,754,152 + +0.1 5,754,152 + +1.3 5,754,153 - +0.4 5,754,489 + AO356_25450 0.36 -0.3
Or see this region's nucleotide sequence