Experiment: Cisplatin 0.0032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_24460 and AO356_24465 are separated by 4 nucleotides AO356_24465 and AO356_24470 overlap by 4 nucleotides
AO356_24460: AO356_24460 - microcin ABC transporter permease, at 5,522,379 to 5,523,452
_24460
AO356_24465: AO356_24465 - hypothetical protein, at 5,523,457 to 5,525,310
_24465
AO356_24470: AO356_24470 - ABC transporter substrate-binding protein, at 5,525,307 to 5,527,139
_24470
Position (kb)
5523
5524
5525
5526 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 5522.500 kb on + strand, within AO356_24460 at 5522.704 kb on + strand, within AO356_24460 at 5522.704 kb on + strand, within AO356_24460 at 5522.705 kb on - strand, within AO356_24460 at 5522.705 kb on - strand, within AO356_24460 at 5522.705 kb on - strand, within AO356_24460 at 5522.705 kb on - strand, within AO356_24460 at 5522.809 kb on + strand, within AO356_24460 at 5522.810 kb on - strand, within AO356_24460 at 5522.810 kb on - strand, within AO356_24460 at 5522.810 kb on - strand, within AO356_24460 at 5522.887 kb on + strand, within AO356_24460 at 5522.887 kb on + strand, within AO356_24460 at 5522.888 kb on - strand, within AO356_24460 at 5523.038 kb on - strand, within AO356_24460 at 5523.038 kb on - strand, within AO356_24460 at 5523.038 kb on - strand, within AO356_24460 at 5523.151 kb on + strand, within AO356_24460 at 5523.151 kb on + strand, within AO356_24460 at 5523.203 kb on - strand, within AO356_24460 at 5523.203 kb on - strand, within AO356_24460 at 5523.458 kb on + strand at 5523.459 kb on - strand at 5523.459 kb on - strand at 5523.459 kb on - strand at 5523.509 kb on - strand at 5523.566 kb on + strand at 5523.606 kb on - strand at 5523.647 kb on + strand, within AO356_24465 at 5523.647 kb on + strand, within AO356_24465 at 5523.647 kb on + strand, within AO356_24465 at 5523.647 kb on + strand, within AO356_24465 at 5523.648 kb on - strand, within AO356_24465 at 5523.648 kb on - strand, within AO356_24465 at 5523.648 kb on - strand, within AO356_24465 at 5523.648 kb on - strand, within AO356_24465 at 5523.648 kb on - strand, within AO356_24465 at 5523.650 kb on + strand, within AO356_24465 at 5523.650 kb on + strand, within AO356_24465 at 5523.896 kb on + strand, within AO356_24465 at 5523.897 kb on - strand, within AO356_24465 at 5523.970 kb on + strand, within AO356_24465 at 5523.970 kb on + strand, within AO356_24465 at 5523.971 kb on - strand, within AO356_24465 at 5523.972 kb on + strand, within AO356_24465 at 5523.972 kb on + strand, within AO356_24465 at 5523.972 kb on + strand, within AO356_24465 at 5523.972 kb on + strand, within AO356_24465 at 5523.973 kb on - strand, within AO356_24465 at 5523.973 kb on - strand, within AO356_24465 at 5523.973 kb on - strand, within AO356_24465 at 5523.973 kb on - strand, within AO356_24465 at 5523.973 kb on - strand, within AO356_24465 at 5524.247 kb on + strand, within AO356_24465 at 5524.247 kb on + strand, within AO356_24465 at 5524.247 kb on + strand, within AO356_24465 at 5524.265 kb on + strand, within AO356_24465 at 5524.367 kb on + strand, within AO356_24465 at 5524.368 kb on - strand, within AO356_24465 at 5524.542 kb on - strand, within AO356_24465 at 5524.545 kb on - strand, within AO356_24465 at 5524.545 kb on - strand, within AO356_24465 at 5524.545 kb on - strand, within AO356_24465 at 5524.571 kb on + strand, within AO356_24465 at 5524.572 kb on - strand, within AO356_24465 at 5524.608 kb on - strand, within AO356_24465 at 5524.664 kb on + strand, within AO356_24465 at 5524.664 kb on + strand, within AO356_24465 at 5524.664 kb on + strand, within AO356_24465 at 5524.956 kb on - strand, within AO356_24465 at 5525.013 kb on - strand, within AO356_24465 at 5525.057 kb on + strand, within AO356_24465 at 5525.057 kb on + strand, within AO356_24465 at 5525.057 kb on + strand, within AO356_24465 at 5525.058 kb on - strand, within AO356_24465 at 5525.174 kb on + strand at 5525.174 kb on + strand at 5525.174 kb on + strand at 5525.219 kb on + strand at 5525.220 kb on - strand at 5525.299 kb on + strand at 5525.299 kb on + strand at 5525.357 kb on + strand at 5525.359 kb on + strand at 5525.359 kb on + strand at 5525.360 kb on - strand at 5525.410 kb on + strand at 5525.410 kb on + strand at 5525.411 kb on - strand at 5525.411 kb on - strand at 5525.419 kb on + strand at 5525.437 kb on + strand at 5525.437 kb on + strand at 5525.437 kb on + strand at 5525.438 kb on - strand at 5525.455 kb on - strand at 5525.455 kb on - strand at 5525.558 kb on - strand, within AO356_24470 at 5525.599 kb on + strand, within AO356_24470 at 5525.600 kb on - strand, within AO356_24470 at 5525.600 kb on - strand, within AO356_24470 at 5525.749 kb on + strand, within AO356_24470 at 5525.749 kb on + strand, within AO356_24470 at 5525.749 kb on + strand, within AO356_24470 at 5525.750 kb on - strand, within AO356_24470 at 5525.750 kb on - strand, within AO356_24470 at 5525.750 kb on - strand, within AO356_24470 at 5525.762 kb on + strand, within AO356_24470 at 5526.037 kb on + strand, within AO356_24470 at 5526.038 kb on - strand, within AO356_24470 at 5526.038 kb on - strand, within AO356_24470 at 5526.038 kb on - strand, within AO356_24470 at 5526.055 kb on + strand, within AO356_24470 at 5526.056 kb on - strand, within AO356_24470 at 5526.277 kb on + strand, within AO356_24470 at 5526.277 kb on + strand, within AO356_24470 at 5526.277 kb on + strand, within AO356_24470 at 5526.277 kb on + strand, within AO356_24470 at 5526.277 kb on + strand, within AO356_24470
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.0032 mg/ml remove 5,522,500 + AO356_24460 0.11 -0.6 5,522,704 + AO356_24460 0.30 -0.5 5,522,704 + AO356_24460 0.30 -0.2 5,522,705 - AO356_24460 0.30 +0.3 5,522,705 - AO356_24460 0.30 +2.3 5,522,705 - AO356_24460 0.30 +1.8 5,522,705 - AO356_24460 0.30 +0.2 5,522,809 + AO356_24460 0.40 +0.6 5,522,810 - AO356_24460 0.40 -0.1 5,522,810 - AO356_24460 0.40 +0.6 5,522,810 - AO356_24460 0.40 +2.3 5,522,887 + AO356_24460 0.47 -0.8 5,522,887 + AO356_24460 0.47 -0.0 5,522,888 - AO356_24460 0.47 -0.1 5,523,038 - AO356_24460 0.61 -2.8 5,523,038 - AO356_24460 0.61 +1.5 5,523,038 - AO356_24460 0.61 +0.8 5,523,151 + AO356_24460 0.72 -0.1 5,523,151 + AO356_24460 0.72 -0.1 5,523,203 - AO356_24460 0.77 +2.0 5,523,203 - AO356_24460 0.77 -0.1 5,523,458 + -0.8 5,523,459 - -0.2 5,523,459 - -0.7 5,523,459 - +1.3 5,523,509 - +0.2 5,523,566 + -1.2 5,523,606 - -0.4 5,523,647 + AO356_24465 0.10 +0.2 5,523,647 + AO356_24465 0.10 +0.5 5,523,647 + AO356_24465 0.10 -0.1 5,523,647 + AO356_24465 0.10 -0.2 5,523,648 - AO356_24465 0.10 +0.6 5,523,648 - AO356_24465 0.10 +0.4 5,523,648 - AO356_24465 0.10 -1.0 5,523,648 - AO356_24465 0.10 +0.9 5,523,648 - AO356_24465 0.10 +0.3 5,523,650 + AO356_24465 0.10 +0.3 5,523,650 + AO356_24465 0.10 -0.2 5,523,896 + AO356_24465 0.24 +0.7 5,523,897 - AO356_24465 0.24 +0.8 5,523,970 + AO356_24465 0.28 +0.3 5,523,970 + AO356_24465 0.28 +0.8 5,523,971 - AO356_24465 0.28 +1.3 5,523,972 + AO356_24465 0.28 -0.7 5,523,972 + AO356_24465 0.28 -0.7 5,523,972 + AO356_24465 0.28 +0.3 5,523,972 + AO356_24465 0.28 +0.3 5,523,973 - AO356_24465 0.28 -0.2 5,523,973 - AO356_24465 0.28 +0.8 5,523,973 - AO356_24465 0.28 -0.8 5,523,973 - AO356_24465 0.28 -0.6 5,523,973 - AO356_24465 0.28 +0.8 5,524,247 + AO356_24465 0.43 -1.1 5,524,247 + AO356_24465 0.43 -0.6 5,524,247 + AO356_24465 0.43 -0.1 5,524,265 + AO356_24465 0.44 +0.2 5,524,367 + AO356_24465 0.49 -1.2 5,524,368 - AO356_24465 0.49 +0.2 5,524,542 - AO356_24465 0.59 -0.6 5,524,545 - AO356_24465 0.59 +1.0 5,524,545 - AO356_24465 0.59 +0.5 5,524,545 - AO356_24465 0.59 -0.7 5,524,571 + AO356_24465 0.60 -0.1 5,524,572 - AO356_24465 0.60 +0.3 5,524,608 - AO356_24465 0.62 +0.1 5,524,664 + AO356_24465 0.65 +1.3 5,524,664 + AO356_24465 0.65 -0.7 5,524,664 + AO356_24465 0.65 -0.4 5,524,956 - AO356_24465 0.81 -0.0 5,525,013 - AO356_24465 0.84 -1.1 5,525,057 + AO356_24465 0.86 -0.1 5,525,057 + AO356_24465 0.86 +0.6 5,525,057 + AO356_24465 0.86 +0.1 5,525,058 - AO356_24465 0.86 +0.6 5,525,174 + +0.5 5,525,174 + +0.8 5,525,174 + +0.2 5,525,219 + -0.1 5,525,220 - +2.3 5,525,299 + -0.7 5,525,299 + +0.8 5,525,357 + +0.8 5,525,359 + -0.0 5,525,359 + -1.2 5,525,360 - +0.1 5,525,410 + -0.8 5,525,410 + +0.1 5,525,411 - +0.0 5,525,411 - -0.7 5,525,419 + +0.8 5,525,437 + -0.2 5,525,437 + +0.2 5,525,437 + +0.1 5,525,438 - +0.8 5,525,455 - +1.0 5,525,455 - +0.1 5,525,558 - AO356_24470 0.14 +0.1 5,525,599 + AO356_24470 0.16 +0.2 5,525,600 - AO356_24470 0.16 +0.6 5,525,600 - AO356_24470 0.16 -1.8 5,525,749 + AO356_24470 0.24 -0.2 5,525,749 + AO356_24470 0.24 +0.8 5,525,749 + AO356_24470 0.24 -0.2 5,525,750 - AO356_24470 0.24 -1.5 5,525,750 - AO356_24470 0.24 +0.8 5,525,750 - AO356_24470 0.24 -1.8 5,525,762 + AO356_24470 0.25 -0.8 5,526,037 + AO356_24470 0.40 -0.1 5,526,038 - AO356_24470 0.40 -0.0 5,526,038 - AO356_24470 0.40 +1.2 5,526,038 - AO356_24470 0.40 +0.5 5,526,055 + AO356_24470 0.41 +0.8 5,526,056 - AO356_24470 0.41 +0.6 5,526,277 + AO356_24470 0.53 -0.2 5,526,277 + AO356_24470 0.53 +0.4 5,526,277 + AO356_24470 0.53 +1.2 5,526,277 + AO356_24470 0.53 -1.7 5,526,277 + AO356_24470 0.53 +0.3
Or see this region's nucleotide sequence