Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_23995
Experiment: Cisplatin 0.0032 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cisplatin 0.0032 mg/ml |
---|---|---|---|---|---|
remove | |||||
5,378,884 | - | +0.8 | |||
5,379,338 | + | AO356_23990 | 0.57 | -0.8 | |
5,379,339 | - | AO356_23990 | 0.57 | +0.1 | |
5,379,339 | - | AO356_23990 | 0.57 | -0.5 | |
5,379,930 | - | AO356_23995 | 0.20 | +0.0 | |
5,379,952 | - | AO356_23995 | 0.23 | -0.0 | |
5,380,113 | + | AO356_23995 | 0.42 | -0.2 | |
5,380,129 | - | AO356_23995 | 0.43 | -0.5 | |
5,380,254 | + | AO356_23995 | 0.58 | -0.5 | |
5,380,254 | + | AO356_23995 | 0.58 | -0.2 | |
5,380,576 | - | +0.8 | |||
5,380,576 | - | +0.9 | |||
5,380,576 | - | -1.2 | |||
5,380,710 | - | +0.6 | |||
5,380,830 | + | AO356_24000 | 0.16 | -1.2 | |
5,380,830 | + | AO356_24000 | 0.16 | +0.4 | |
5,380,831 | - | AO356_24000 | 0.16 | -0.6 |
Or see this region's nucleotide sequence