Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_23985
Experiment: Cisplatin 0.0032 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cisplatin 0.0032 mg/ml |
---|---|---|---|---|---|
remove | |||||
5,377,125 | - | +0.0 | |||
5,377,148 | - | -1.8 | |||
5,377,205 | + | -0.1 | |||
5,377,231 | + | +0.4 | |||
5,377,232 | - | -1.6 | |||
5,377,232 | - | -0.5 | |||
5,377,300 | - | +0.5 | |||
5,377,300 | - | +0.9 | |||
5,377,300 | - | -0.8 | |||
5,377,359 | + | AO356_23980 | 0.18 | -0.6 | |
5,377,499 | - | AO356_23980 | 0.49 | +0.5 | |
5,377,799 | - | -0.0 | |||
5,377,849 | + | AO356_23985 | 0.10 | +0.8 | |
5,377,849 | + | AO356_23985 | 0.10 | -0.2 | |
5,377,849 | + | AO356_23985 | 0.10 | +1.4 | |
5,377,850 | - | AO356_23985 | 0.10 | +1.4 | |
5,377,850 | - | AO356_23985 | 0.10 | -0.2 | |
5,377,850 | - | AO356_23985 | 0.10 | -0.4 | |
5,377,923 | - | AO356_23985 | 0.19 | -0.9 | |
5,377,990 | + | AO356_23985 | 0.27 | +0.4 | |
5,377,991 | - | AO356_23985 | 0.27 | +0.1 | |
5,378,047 | + | AO356_23985 | 0.33 | +1.4 | |
5,378,047 | + | AO356_23985 | 0.33 | +0.0 | |
5,378,105 | - | AO356_23985 | 0.40 | +1.6 | |
5,378,884 | - | +0.8 | |||
5,379,338 | + | AO356_23990 | 0.57 | -0.8 | |
5,379,339 | - | AO356_23990 | 0.57 | +0.1 | |
5,379,339 | - | AO356_23990 | 0.57 | -0.5 |
Or see this region's nucleotide sequence