Experiment: Cisplatin 0.0032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_22895 and AO356_22900 are separated by 134 nucleotides AO356_22900 and AO356_22905 are separated by 429 nucleotides
AO356_22895: AO356_22895 - hypothetical protein, at 5,111,932 to 5,114,172
_22895
AO356_22900: AO356_22900 - hypothetical protein, at 5,114,307 to 5,114,795
_22900
AO356_22905: AO356_22905 - transcriptional regulator, at 5,115,225 to 5,115,926
_22905
Position (kb)
5114
5115 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 5113.310 kb on + strand, within AO356_22895 at 5113.315 kb on + strand, within AO356_22895 at 5113.315 kb on + strand, within AO356_22895 at 5113.326 kb on + strand, within AO356_22895 at 5113.326 kb on + strand, within AO356_22895 at 5113.326 kb on + strand, within AO356_22895 at 5113.327 kb on - strand, within AO356_22895 at 5113.335 kb on - strand, within AO356_22895 at 5113.335 kb on - strand, within AO356_22895 at 5113.338 kb on + strand, within AO356_22895 at 5113.339 kb on - strand, within AO356_22895 at 5113.339 kb on - strand, within AO356_22895 at 5113.396 kb on + strand, within AO356_22895 at 5113.408 kb on + strand, within AO356_22895 at 5113.408 kb on + strand, within AO356_22895 at 5113.408 kb on + strand, within AO356_22895 at 5113.408 kb on + strand, within AO356_22895 at 5113.409 kb on - strand, within AO356_22895 at 5113.409 kb on - strand, within AO356_22895 at 5113.438 kb on + strand, within AO356_22895 at 5113.438 kb on + strand, within AO356_22895 at 5113.439 kb on - strand, within AO356_22895 at 5113.440 kb on + strand, within AO356_22895 at 5113.440 kb on + strand, within AO356_22895 at 5113.440 kb on + strand, within AO356_22895 at 5113.530 kb on + strand, within AO356_22895 at 5113.531 kb on - strand, within AO356_22895 at 5113.531 kb on - strand, within AO356_22895 at 5113.531 kb on - strand, within AO356_22895 at 5113.586 kb on - strand, within AO356_22895 at 5113.586 kb on - strand, within AO356_22895 at 5113.597 kb on + strand, within AO356_22895 at 5113.597 kb on + strand, within AO356_22895 at 5113.597 kb on + strand, within AO356_22895 at 5113.597 kb on + strand, within AO356_22895 at 5113.598 kb on - strand, within AO356_22895 at 5113.630 kb on + strand, within AO356_22895 at 5113.630 kb on + strand, within AO356_22895 at 5113.631 kb on - strand, within AO356_22895 at 5113.647 kb on + strand, within AO356_22895 at 5113.714 kb on + strand, within AO356_22895 at 5113.714 kb on + strand, within AO356_22895 at 5113.715 kb on - strand, within AO356_22895 at 5113.778 kb on - strand, within AO356_22895 at 5113.792 kb on + strand, within AO356_22895 at 5113.797 kb on + strand, within AO356_22895 at 5113.797 kb on + strand, within AO356_22895 at 5113.797 kb on + strand, within AO356_22895 at 5113.797 kb on + strand, within AO356_22895 at 5113.798 kb on - strand, within AO356_22895 at 5113.798 kb on - strand, within AO356_22895 at 5113.798 kb on - strand, within AO356_22895 at 5113.798 kb on - strand, within AO356_22895 at 5113.849 kb on - strand, within AO356_22895 at 5113.915 kb on + strand, within AO356_22895 at 5113.948 kb on + strand, within AO356_22895 at 5113.948 kb on + strand, within AO356_22895 at 5113.948 kb on + strand, within AO356_22895 at 5113.948 kb on + strand, within AO356_22895 at 5113.948 kb on + strand, within AO356_22895 at 5113.948 kb on + strand, within AO356_22895 at 5113.948 kb on + strand, within AO356_22895 at 5113.948 kb on + strand, within AO356_22895 at 5113.948 kb on + strand, within AO356_22895 at 5113.949 kb on - strand at 5113.949 kb on - strand at 5113.949 kb on - strand at 5113.949 kb on - strand at 5113.949 kb on - strand at 5113.949 kb on - strand at 5113.949 kb on - strand at 5113.949 kb on - strand at 5113.949 kb on - strand at 5113.949 kb on - strand at 5113.949 kb on - strand at 5113.949 kb on - strand at 5113.949 kb on - strand at 5113.952 kb on + strand at 5113.952 kb on + strand at 5113.952 kb on + strand at 5113.952 kb on + strand at 5113.953 kb on - strand at 5113.953 kb on - strand at 5113.953 kb on - strand at 5113.953 kb on - strand at 5113.986 kb on + strand at 5113.987 kb on - strand at 5113.987 kb on - strand at 5114.008 kb on - strand at 5114.008 kb on - strand at 5114.108 kb on - strand at 5114.230 kb on + strand at 5114.230 kb on + strand at 5114.230 kb on + strand at 5114.230 kb on + strand at 5114.230 kb on + strand at 5114.231 kb on - strand at 5114.231 kb on - strand at 5114.321 kb on + strand at 5114.322 kb on - strand at 5114.367 kb on - strand, within AO356_22900 at 5114.385 kb on + strand, within AO356_22900 at 5114.385 kb on + strand, within AO356_22900 at 5114.385 kb on + strand, within AO356_22900 at 5114.386 kb on - strand, within AO356_22900 at 5114.386 kb on - strand, within AO356_22900 at 5114.386 kb on - strand, within AO356_22900 at 5114.416 kb on + strand, within AO356_22900 at 5114.417 kb on - strand, within AO356_22900 at 5114.493 kb on + strand, within AO356_22900 at 5114.494 kb on - strand, within AO356_22900 at 5114.501 kb on + strand, within AO356_22900 at 5114.502 kb on - strand, within AO356_22900 at 5114.578 kb on + strand, within AO356_22900 at 5114.579 kb on - strand, within AO356_22900 at 5114.593 kb on - strand, within AO356_22900 at 5114.630 kb on + strand, within AO356_22900 at 5114.632 kb on + strand, within AO356_22900 at 5114.632 kb on + strand, within AO356_22900 at 5114.705 kb on - strand, within AO356_22900 at 5114.708 kb on + strand, within AO356_22900 at 5114.709 kb on - strand, within AO356_22900 at 5114.715 kb on + strand, within AO356_22900 at 5114.746 kb on - strand, within AO356_22900 at 5114.799 kb on + strand at 5114.800 kb on - strand at 5114.826 kb on + strand at 5114.853 kb on + strand at 5114.868 kb on - strand at 5114.868 kb on - strand at 5114.868 kb on - strand at 5114.868 kb on - strand at 5114.868 kb on - strand at 5114.868 kb on - strand at 5114.902 kb on - strand at 5115.023 kb on + strand at 5115.024 kb on - strand at 5115.037 kb on + strand at 5115.053 kb on - strand at 5115.053 kb on - strand at 5115.068 kb on + strand at 5115.068 kb on + strand at 5115.069 kb on - strand at 5115.069 kb on - strand at 5115.069 kb on - strand at 5115.069 kb on - strand at 5115.069 kb on - strand at 5115.070 kb on + strand at 5115.071 kb on - strand at 5115.282 kb on + strand at 5115.519 kb on + strand, within AO356_22905 at 5115.519 kb on + strand, within AO356_22905 at 5115.520 kb on - strand, within AO356_22905 at 5115.520 kb on - strand, within AO356_22905 at 5115.520 kb on - strand, within AO356_22905 at 5115.520 kb on - strand, within AO356_22905 at 5115.520 kb on - strand, within AO356_22905 at 5115.702 kb on + strand, within AO356_22905 at 5115.702 kb on + strand, within AO356_22905 at 5115.703 kb on - strand, within AO356_22905 at 5115.703 kb on - strand, within AO356_22905
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.0032 mg/ml remove 5,113,310 + AO356_22895 0.61 -0.6 5,113,315 + AO356_22895 0.62 -0.1 5,113,315 + AO356_22895 0.62 -0.1 5,113,326 + AO356_22895 0.62 -0.5 5,113,326 + AO356_22895 0.62 -1.3 5,113,326 + AO356_22895 0.62 -0.9 5,113,327 - AO356_22895 0.62 -0.7 5,113,335 - AO356_22895 0.63 -1.1 5,113,335 - AO356_22895 0.63 -2.8 5,113,338 + AO356_22895 0.63 +0.3 5,113,339 - AO356_22895 0.63 -0.9 5,113,339 - AO356_22895 0.63 +0.2 5,113,396 + AO356_22895 0.65 -0.8 5,113,408 + AO356_22895 0.66 -0.4 5,113,408 + AO356_22895 0.66 +0.3 5,113,408 + AO356_22895 0.66 -0.1 5,113,408 + AO356_22895 0.66 -1.1 5,113,409 - AO356_22895 0.66 +0.3 5,113,409 - AO356_22895 0.66 +0.2 5,113,438 + AO356_22895 0.67 -0.7 5,113,438 + AO356_22895 0.67 +2.1 5,113,439 - AO356_22895 0.67 +0.0 5,113,440 + AO356_22895 0.67 +0.0 5,113,440 + AO356_22895 0.67 +0.9 5,113,440 + AO356_22895 0.67 -0.5 5,113,530 + AO356_22895 0.71 +1.7 5,113,531 - AO356_22895 0.71 -1.5 5,113,531 - AO356_22895 0.71 -0.1 5,113,531 - AO356_22895 0.71 +1.1 5,113,586 - AO356_22895 0.74 +1.9 5,113,586 - AO356_22895 0.74 +0.4 5,113,597 + AO356_22895 0.74 -0.3 5,113,597 + AO356_22895 0.74 +0.1 5,113,597 + AO356_22895 0.74 -2.5 5,113,597 + AO356_22895 0.74 +0.9 5,113,598 - AO356_22895 0.74 +0.6 5,113,630 + AO356_22895 0.76 +0.4 5,113,630 + AO356_22895 0.76 -1.1 5,113,631 - AO356_22895 0.76 -0.0 5,113,647 + AO356_22895 0.77 +0.5 5,113,714 + AO356_22895 0.80 +0.7 5,113,714 + AO356_22895 0.80 +0.1 5,113,715 - AO356_22895 0.80 -0.8 5,113,778 - AO356_22895 0.82 -0.9 5,113,792 + AO356_22895 0.83 -0.9 5,113,797 + AO356_22895 0.83 +0.2 5,113,797 + AO356_22895 0.83 +0.0 5,113,797 + AO356_22895 0.83 +0.4 5,113,797 + AO356_22895 0.83 -1.1 5,113,798 - AO356_22895 0.83 -1.2 5,113,798 - AO356_22895 0.83 +1.1 5,113,798 - AO356_22895 0.83 +0.4 5,113,798 - AO356_22895 0.83 -1.6 5,113,849 - AO356_22895 0.86 +1.2 5,113,915 + AO356_22895 0.88 -0.4 5,113,948 + AO356_22895 0.90 +0.1 5,113,948 + AO356_22895 0.90 -0.7 5,113,948 + AO356_22895 0.90 -1.1 5,113,948 + AO356_22895 0.90 +0.2 5,113,948 + AO356_22895 0.90 -1.3 5,113,948 + AO356_22895 0.90 -1.1 5,113,948 + AO356_22895 0.90 -1.4 5,113,948 + AO356_22895 0.90 +0.1 5,113,948 + AO356_22895 0.90 +0.1 5,113,949 - +0.4 5,113,949 - +0.7 5,113,949 - +0.1 5,113,949 - +1.0 5,113,949 - -3.5 5,113,949 - -0.4 5,113,949 - +0.5 5,113,949 - +0.2 5,113,949 - -1.1 5,113,949 - +0.6 5,113,949 - -0.8 5,113,949 - +0.9 5,113,949 - +0.4 5,113,952 + +0.5 5,113,952 + +0.3 5,113,952 + +0.9 5,113,952 + +0.3 5,113,953 - +2.3 5,113,953 - +2.8 5,113,953 - +0.4 5,113,953 - +0.4 5,113,986 + +0.3 5,113,987 - -0.1 5,113,987 - +1.4 5,114,008 - +0.1 5,114,008 - -1.1 5,114,108 - -0.3 5,114,230 + -0.2 5,114,230 + -0.8 5,114,230 + +0.7 5,114,230 + +0.2 5,114,230 + +0.6 5,114,231 - +0.7 5,114,231 - -0.6 5,114,321 + -1.0 5,114,322 - -0.0 5,114,367 - AO356_22900 0.12 +1.3 5,114,385 + AO356_22900 0.16 +0.4 5,114,385 + AO356_22900 0.16 -1.7 5,114,385 + AO356_22900 0.16 +0.9 5,114,386 - AO356_22900 0.16 -0.1 5,114,386 - AO356_22900 0.16 -0.6 5,114,386 - AO356_22900 0.16 +0.0 5,114,416 + AO356_22900 0.22 +0.1 5,114,417 - AO356_22900 0.22 +0.4 5,114,493 + AO356_22900 0.38 +0.5 5,114,494 - AO356_22900 0.38 +0.4 5,114,501 + AO356_22900 0.40 +0.6 5,114,502 - AO356_22900 0.40 +1.3 5,114,578 + AO356_22900 0.55 -0.1 5,114,579 - AO356_22900 0.56 +1.2 5,114,593 - AO356_22900 0.58 +0.1 5,114,630 + AO356_22900 0.66 -0.1 5,114,632 + AO356_22900 0.66 -0.3 5,114,632 + AO356_22900 0.66 +0.1 5,114,705 - AO356_22900 0.81 -0.1 5,114,708 + AO356_22900 0.82 -0.5 5,114,709 - AO356_22900 0.82 +1.3 5,114,715 + AO356_22900 0.83 -1.0 5,114,746 - AO356_22900 0.90 +0.4 5,114,799 + +0.2 5,114,800 - +0.3 5,114,826 + +1.7 5,114,853 + +0.5 5,114,868 - +0.9 5,114,868 - +1.4 5,114,868 - -0.6 5,114,868 - -0.5 5,114,868 - -0.1 5,114,868 - +0.4 5,114,902 - -0.1 5,115,023 + -0.1 5,115,024 - -0.5 5,115,037 + +0.6 5,115,053 - +0.0 5,115,053 - -0.5 5,115,068 + -0.1 5,115,068 + +0.3 5,115,069 - +0.3 5,115,069 - -2.1 5,115,069 - -0.1 5,115,069 - -0.7 5,115,069 - +0.1 5,115,070 + +1.4 5,115,071 - -1.1 5,115,282 + -1.7 5,115,519 + AO356_22905 0.42 +0.2 5,115,519 + AO356_22905 0.42 -0.9 5,115,520 - AO356_22905 0.42 +0.2 5,115,520 - AO356_22905 0.42 -1.1 5,115,520 - AO356_22905 0.42 -2.1 5,115,520 - AO356_22905 0.42 -2.3 5,115,520 - AO356_22905 0.42 -0.8 5,115,702 + AO356_22905 0.68 -1.1 5,115,702 + AO356_22905 0.68 -0.1 5,115,703 - AO356_22905 0.68 -0.1 5,115,703 - AO356_22905 0.68 -1.1
Or see this region's nucleotide sequence