Experiment: Cisplatin 0.0032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_22345 and AO356_22350 are separated by 1 nucleotides AO356_22350 and AO356_22355 are separated by 176 nucleotides AO356_22355 and AO356_22360 overlap by 4 nucleotides
AO356_22345: AO356_22345 - potassium transporter KefC, at 4,995,646 to 4,997,472
_22345
AO356_22350: AO356_22350 - potassium transporter KefF, at 4,997,474 to 4,997,995
_22350
AO356_22355: AO356_22355 - histidine kinase, at 4,998,172 to 4,999,518
_22355
AO356_22360: AO356_22360 - chemotaxis protein CheY, at 4,999,515 to 5,000,225
_22360
Position (kb)
4998
4999
5000 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4997.324 kb on + strand at 4997.368 kb on + strand at 4997.369 kb on - strand at 4997.369 kb on - strand at 4997.373 kb on - strand at 4997.438 kb on + strand at 4997.438 kb on + strand at 4997.438 kb on + strand at 4997.438 kb on + strand at 4997.508 kb on + strand at 4997.508 kb on + strand at 4997.508 kb on + strand at 4997.509 kb on - strand at 4997.509 kb on - strand at 4997.509 kb on - strand at 4997.550 kb on + strand, within AO356_22350 at 4997.595 kb on + strand, within AO356_22350 at 4997.595 kb on + strand, within AO356_22350 at 4997.595 kb on + strand, within AO356_22350 at 4997.595 kb on + strand, within AO356_22350 at 4997.596 kb on - strand, within AO356_22350 at 4997.596 kb on - strand, within AO356_22350 at 4997.596 kb on - strand, within AO356_22350 at 4997.596 kb on - strand, within AO356_22350 at 4997.596 kb on - strand, within AO356_22350 at 4997.596 kb on - strand, within AO356_22350 at 4997.733 kb on + strand, within AO356_22350 at 4997.793 kb on + strand, within AO356_22350 at 4997.793 kb on + strand, within AO356_22350 at 4997.799 kb on + strand, within AO356_22350 at 4997.799 kb on + strand, within AO356_22350 at 4997.799 kb on + strand, within AO356_22350 at 4997.799 kb on + strand, within AO356_22350 at 4997.800 kb on - strand, within AO356_22350 at 4997.889 kb on + strand, within AO356_22350 at 4997.890 kb on - strand, within AO356_22350 at 4997.890 kb on - strand, within AO356_22350 at 4997.900 kb on + strand, within AO356_22350 at 4997.900 kb on + strand, within AO356_22350 at 4997.900 kb on + strand, within AO356_22350 at 4997.900 kb on + strand, within AO356_22350 at 4997.901 kb on - strand, within AO356_22350 at 4997.901 kb on - strand, within AO356_22350 at 4997.901 kb on - strand, within AO356_22350 at 4997.901 kb on - strand, within AO356_22350 at 4997.901 kb on - strand, within AO356_22350 at 4997.979 kb on + strand at 4997.987 kb on - strand at 4998.069 kb on + strand at 4998.070 kb on - strand at 4998.353 kb on + strand, within AO356_22355 at 4998.443 kb on + strand, within AO356_22355 at 4998.506 kb on + strand, within AO356_22355 at 4998.506 kb on + strand, within AO356_22355 at 4998.506 kb on + strand, within AO356_22355 at 4998.506 kb on + strand, within AO356_22355 at 4998.506 kb on + strand, within AO356_22355 at 4998.507 kb on - strand, within AO356_22355 at 4998.507 kb on - strand, within AO356_22355 at 4998.507 kb on - strand, within AO356_22355 at 4998.507 kb on - strand, within AO356_22355 at 4999.139 kb on + strand, within AO356_22355 at 4999.139 kb on + strand, within AO356_22355 at 4999.140 kb on - strand, within AO356_22355 at 4999.546 kb on + strand at 4999.728 kb on + strand, within AO356_22360 at 5000.147 kb on + strand, within AO356_22360 at 5000.148 kb on - strand, within AO356_22360 at 5000.148 kb on - strand, within AO356_22360 at 5000.148 kb on - strand, within AO356_22360 at 5000.149 kb on + strand, within AO356_22360 at 5000.149 kb on + strand, within AO356_22360 at 5000.150 kb on - strand, within AO356_22360 at 5000.150 kb on - strand, within AO356_22360 at 5000.211 kb on + strand at 5000.214 kb on + strand at 5000.214 kb on + strand at 5000.215 kb on - strand at 5000.215 kb on - strand at 5000.215 kb on - strand at 5000.248 kb on + strand at 5000.248 kb on + strand at 5000.249 kb on - strand at 5000.261 kb on - strand at 5000.261 kb on - strand at 5000.263 kb on + strand at 5000.263 kb on + strand at 5000.263 kb on + strand at 5000.263 kb on + strand at 5000.263 kb on + strand at 5000.264 kb on - strand at 5000.290 kb on + strand at 5000.290 kb on + strand at 5000.290 kb on + strand at 5000.291 kb on - strand at 5000.291 kb on - strand at 5000.291 kb on - strand at 5000.291 kb on - strand at 5000.291 kb on - strand at 5000.291 kb on - strand at 5000.307 kb on - strand at 5000.325 kb on + strand at 5000.326 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.0032 mg/ml remove 4,997,324 + +0.7 4,997,368 + -0.1 4,997,369 - -0.4 4,997,369 - +0.8 4,997,373 - -1.3 4,997,438 + -0.6 4,997,438 + -0.8 4,997,438 + +0.1 4,997,438 + +1.2 4,997,508 + -1.2 4,997,508 + -0.5 4,997,508 + +0.3 4,997,509 - +1.3 4,997,509 - -1.6 4,997,509 - -0.4 4,997,550 + AO356_22350 0.15 +0.1 4,997,595 + AO356_22350 0.23 +0.4 4,997,595 + AO356_22350 0.23 -0.5 4,997,595 + AO356_22350 0.23 +1.1 4,997,595 + AO356_22350 0.23 +0.1 4,997,596 - AO356_22350 0.23 +0.3 4,997,596 - AO356_22350 0.23 -0.1 4,997,596 - AO356_22350 0.23 -0.6 4,997,596 - AO356_22350 0.23 +1.6 4,997,596 - AO356_22350 0.23 -0.3 4,997,596 - AO356_22350 0.23 +0.7 4,997,733 + AO356_22350 0.50 -0.1 4,997,793 + AO356_22350 0.61 +0.4 4,997,793 + AO356_22350 0.61 -0.7 4,997,799 + AO356_22350 0.62 -0.0 4,997,799 + AO356_22350 0.62 +0.9 4,997,799 + AO356_22350 0.62 -0.6 4,997,799 + AO356_22350 0.62 +0.2 4,997,800 - AO356_22350 0.62 -1.2 4,997,889 + AO356_22350 0.80 -0.6 4,997,890 - AO356_22350 0.80 -1.7 4,997,890 - AO356_22350 0.80 +2.5 4,997,900 + AO356_22350 0.82 -0.5 4,997,900 + AO356_22350 0.82 -1.0 4,997,900 + AO356_22350 0.82 +0.2 4,997,900 + AO356_22350 0.82 +0.4 4,997,901 - AO356_22350 0.82 -0.4 4,997,901 - AO356_22350 0.82 +0.1 4,997,901 - AO356_22350 0.82 -0.1 4,997,901 - AO356_22350 0.82 -1.0 4,997,901 - AO356_22350 0.82 +1.1 4,997,979 + -0.1 4,997,987 - -1.1 4,998,069 + -0.6 4,998,070 - -0.3 4,998,353 + AO356_22355 0.13 +0.6 4,998,443 + AO356_22355 0.20 +0.7 4,998,506 + AO356_22355 0.25 -1.6 4,998,506 + AO356_22355 0.25 +0.3 4,998,506 + AO356_22355 0.25 +0.2 4,998,506 + AO356_22355 0.25 +0.2 4,998,506 + AO356_22355 0.25 +0.2 4,998,507 - AO356_22355 0.25 -0.0 4,998,507 - AO356_22355 0.25 +0.4 4,998,507 - AO356_22355 0.25 -0.9 4,998,507 - AO356_22355 0.25 -0.4 4,999,139 + AO356_22355 0.72 -0.5 4,999,139 + AO356_22355 0.72 +0.1 4,999,140 - AO356_22355 0.72 +0.5 4,999,546 + +0.6 4,999,728 + AO356_22360 0.30 +0.7 5,000,147 + AO356_22360 0.89 +0.0 5,000,148 - AO356_22360 0.89 -0.2 5,000,148 - AO356_22360 0.89 +0.1 5,000,148 - AO356_22360 0.89 -0.5 5,000,149 + AO356_22360 0.89 -0.0 5,000,149 + AO356_22360 0.89 +0.0 5,000,150 - AO356_22360 0.89 -0.1 5,000,150 - AO356_22360 0.89 +0.2 5,000,211 + +0.4 5,000,214 + -0.9 5,000,214 + -0.0 5,000,215 - -0.4 5,000,215 - +0.1 5,000,215 - -1.6 5,000,248 + -1.1 5,000,248 + +0.9 5,000,249 - -0.1 5,000,261 - +0.2 5,000,261 - +0.1 5,000,263 + +1.5 5,000,263 + -0.6 5,000,263 + +0.0 5,000,263 + -0.6 5,000,263 + +0.9 5,000,264 - -1.7 5,000,290 + -1.0 5,000,290 + +0.5 5,000,290 + +0.5 5,000,291 - +1.3 5,000,291 - +1.0 5,000,291 - +1.8 5,000,291 - +0.9 5,000,291 - +0.2 5,000,291 - -2.3 5,000,307 - +0.0 5,000,325 + +0.2 5,000,326 - -0.1
Or see this region's nucleotide sequence