Experiment: Cisplatin 0.0032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_19335 and AO356_19340 are separated by 106 nucleotides AO356_19340 and AO356_19345 are separated by 319 nucleotides AO356_19345 and AO356_19350 overlap by 1 nucleotides
AO356_19335: AO356_19335 - peptidase S41, at 4,340,784 to 4,342,895
_19335
AO356_19340: AO356_19340 - NAD(P)H-quinone oxidoreductase, at 4,343,002 to 4,343,964
_19340
AO356_19345: AO356_19345 - hypothetical protein, at 4,344,284 to 4,344,919
_19345
AO356_19350: AO356_19350 - hypothetical protein, at 4,344,919 to 4,345,707
_19350
Position (kb)
4343
4344 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4342.174 kb on + strand, within AO356_19335 at 4342.174 kb on + strand, within AO356_19335 at 4342.175 kb on - strand, within AO356_19335 at 4342.175 kb on - strand, within AO356_19335 at 4342.175 kb on - strand, within AO356_19335 at 4342.175 kb on - strand, within AO356_19335 at 4342.193 kb on - strand, within AO356_19335 at 4342.216 kb on + strand, within AO356_19335 at 4342.216 kb on + strand, within AO356_19335 at 4342.216 kb on + strand, within AO356_19335 at 4342.217 kb on - strand, within AO356_19335 at 4342.217 kb on - strand, within AO356_19335 at 4342.217 kb on - strand, within AO356_19335 at 4342.217 kb on - strand, within AO356_19335 at 4342.217 kb on - strand, within AO356_19335 at 4342.217 kb on - strand, within AO356_19335 at 4342.217 kb on - strand, within AO356_19335 at 4342.217 kb on - strand, within AO356_19335 at 4342.480 kb on + strand, within AO356_19335 at 4342.480 kb on + strand, within AO356_19335 at 4342.519 kb on + strand, within AO356_19335 at 4342.519 kb on + strand, within AO356_19335 at 4342.519 kb on + strand, within AO356_19335 at 4342.519 kb on + strand, within AO356_19335 at 4342.519 kb on + strand, within AO356_19335 at 4342.519 kb on + strand, within AO356_19335 at 4342.520 kb on - strand, within AO356_19335 at 4342.520 kb on - strand, within AO356_19335 at 4342.520 kb on - strand, within AO356_19335 at 4342.615 kb on + strand, within AO356_19335 at 4342.645 kb on + strand, within AO356_19335 at 4342.645 kb on + strand, within AO356_19335 at 4342.645 kb on + strand, within AO356_19335 at 4342.646 kb on - strand, within AO356_19335 at 4342.646 kb on - strand, within AO356_19335 at 4342.646 kb on - strand, within AO356_19335 at 4342.646 kb on - strand, within AO356_19335 at 4342.646 kb on - strand, within AO356_19335 at 4342.646 kb on - strand, within AO356_19335 at 4342.654 kb on + strand, within AO356_19335 at 4342.654 kb on + strand, within AO356_19335 at 4342.654 kb on + strand, within AO356_19335 at 4342.654 kb on + strand, within AO356_19335 at 4342.654 kb on + strand, within AO356_19335 at 4342.654 kb on + strand, within AO356_19335 at 4342.654 kb on + strand, within AO356_19335 at 4342.655 kb on - strand, within AO356_19335 at 4342.655 kb on - strand, within AO356_19335 at 4342.696 kb on + strand at 4342.696 kb on + strand at 4342.697 kb on - strand at 4342.697 kb on - strand at 4342.790 kb on + strand at 4342.791 kb on - strand at 4342.791 kb on - strand at 4342.895 kb on + strand at 4342.895 kb on + strand at 4342.895 kb on + strand at 4342.895 kb on + strand at 4342.895 kb on + strand at 4342.898 kb on + strand at 4342.898 kb on + strand at 4342.898 kb on + strand at 4342.898 kb on + strand at 4342.899 kb on - strand at 4342.899 kb on - strand at 4342.899 kb on - strand at 4342.941 kb on + strand at 4342.942 kb on - strand at 4342.942 kb on - strand at 4343.356 kb on + strand, within AO356_19340 at 4343.356 kb on + strand, within AO356_19340 at 4343.356 kb on + strand, within AO356_19340 at 4343.521 kb on + strand, within AO356_19340 at 4343.521 kb on + strand, within AO356_19340 at 4343.522 kb on - strand, within AO356_19340 at 4343.522 kb on - strand, within AO356_19340 at 4343.522 kb on - strand, within AO356_19340 at 4343.556 kb on - strand, within AO356_19340 at 4343.630 kb on - strand, within AO356_19340 at 4343.740 kb on - strand, within AO356_19340 at 4344.076 kb on + strand at 4344.076 kb on + strand at 4344.076 kb on + strand at 4344.076 kb on + strand at 4344.077 kb on - strand at 4344.077 kb on - strand at 4344.108 kb on + strand at 4344.221 kb on + strand at 4344.221 kb on + strand at 4344.222 kb on - strand at 4344.222 kb on - strand at 4344.222 kb on - strand at 4344.222 kb on - strand at 4344.337 kb on + strand at 4344.337 kb on + strand at 4344.338 kb on - strand at 4344.338 kb on - strand at 4344.338 kb on - strand at 4344.423 kb on - strand, within AO356_19345 at 4344.827 kb on + strand, within AO356_19345 at 4344.828 kb on - strand, within AO356_19345 at 4344.852 kb on + strand, within AO356_19345 at 4344.852 kb on + strand, within AO356_19345 at 4344.852 kb on + strand, within AO356_19345 at 4344.852 kb on + strand, within AO356_19345 at 4344.853 kb on - strand, within AO356_19345 at 4344.853 kb on - strand, within AO356_19345 at 4344.872 kb on - strand at 4344.872 kb on - strand at 4344.888 kb on + strand at 4344.888 kb on + strand at 4344.888 kb on + strand at 4344.888 kb on + strand at 4344.889 kb on - strand at 4344.889 kb on - strand at 4344.909 kb on + strand at 4344.909 kb on + strand at 4344.909 kb on + strand at 4344.910 kb on - strand at 4344.910 kb on - strand at 4344.910 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.0032 mg/ml remove 4,342,174 + AO356_19335 0.66 +0.0 4,342,174 + AO356_19335 0.66 -1.0 4,342,175 - AO356_19335 0.66 -1.6 4,342,175 - AO356_19335 0.66 -0.2 4,342,175 - AO356_19335 0.66 +1.0 4,342,175 - AO356_19335 0.66 +1.0 4,342,193 - AO356_19335 0.67 -1.3 4,342,216 + AO356_19335 0.68 -2.2 4,342,216 + AO356_19335 0.68 -0.2 4,342,216 + AO356_19335 0.68 -1.6 4,342,217 - AO356_19335 0.68 -0.9 4,342,217 - AO356_19335 0.68 -0.4 4,342,217 - AO356_19335 0.68 -0.4 4,342,217 - AO356_19335 0.68 -2.0 4,342,217 - AO356_19335 0.68 +0.2 4,342,217 - AO356_19335 0.68 -0.2 4,342,217 - AO356_19335 0.68 -0.2 4,342,217 - AO356_19335 0.68 -0.4 4,342,480 + AO356_19335 0.80 -1.2 4,342,480 + AO356_19335 0.80 +1.0 4,342,519 + AO356_19335 0.82 +0.0 4,342,519 + AO356_19335 0.82 +0.6 4,342,519 + AO356_19335 0.82 -0.9 4,342,519 + AO356_19335 0.82 -1.0 4,342,519 + AO356_19335 0.82 +1.8 4,342,519 + AO356_19335 0.82 -0.7 4,342,520 - AO356_19335 0.82 -1.1 4,342,520 - AO356_19335 0.82 +0.0 4,342,520 - AO356_19335 0.82 -1.0 4,342,615 + AO356_19335 0.87 -0.7 4,342,645 + AO356_19335 0.88 +1.0 4,342,645 + AO356_19335 0.88 -0.9 4,342,645 + AO356_19335 0.88 -0.8 4,342,646 - AO356_19335 0.88 +0.0 4,342,646 - AO356_19335 0.88 +0.9 4,342,646 - AO356_19335 0.88 +1.0 4,342,646 - AO356_19335 0.88 +0.0 4,342,646 - AO356_19335 0.88 +0.0 4,342,646 - AO356_19335 0.88 +0.0 4,342,654 + AO356_19335 0.89 +0.1 4,342,654 + AO356_19335 0.89 -1.0 4,342,654 + AO356_19335 0.89 -1.3 4,342,654 + AO356_19335 0.89 -0.3 4,342,654 + AO356_19335 0.89 +0.6 4,342,654 + AO356_19335 0.89 -2.6 4,342,654 + AO356_19335 0.89 -1.0 4,342,655 - AO356_19335 0.89 +1.0 4,342,655 - AO356_19335 0.89 +0.6 4,342,696 + -0.1 4,342,696 + -0.8 4,342,697 - -1.0 4,342,697 - +0.5 4,342,790 + -0.8 4,342,791 - +0.9 4,342,791 - +0.0 4,342,895 + -0.6 4,342,895 + +1.3 4,342,895 + -0.4 4,342,895 + -0.1 4,342,895 + -0.7 4,342,898 + -0.8 4,342,898 + -0.7 4,342,898 + -1.9 4,342,898 + -0.6 4,342,899 - +0.0 4,342,899 - -0.5 4,342,899 - -2.3 4,342,941 + +0.7 4,342,942 - +0.2 4,342,942 - -0.2 4,343,356 + AO356_19340 0.37 -0.1 4,343,356 + AO356_19340 0.37 +0.9 4,343,356 + AO356_19340 0.37 -0.1 4,343,521 + AO356_19340 0.54 +1.6 4,343,521 + AO356_19340 0.54 +0.4 4,343,522 - AO356_19340 0.54 +0.8 4,343,522 - AO356_19340 0.54 +0.6 4,343,522 - AO356_19340 0.54 -1.2 4,343,556 - AO356_19340 0.58 -0.6 4,343,630 - AO356_19340 0.65 -0.6 4,343,740 - AO356_19340 0.77 +0.5 4,344,076 + +0.0 4,344,076 + -0.1 4,344,076 + -0.2 4,344,076 + -1.0 4,344,077 - -0.4 4,344,077 - -1.8 4,344,108 + +0.2 4,344,221 + -0.8 4,344,221 + -0.1 4,344,222 - -0.8 4,344,222 - +0.7 4,344,222 - +0.0 4,344,222 - -0.7 4,344,337 + -1.2 4,344,337 + +0.8 4,344,338 - +0.0 4,344,338 - -0.5 4,344,338 - +0.7 4,344,423 - AO356_19345 0.22 -0.3 4,344,827 + AO356_19345 0.85 -0.8 4,344,828 - AO356_19345 0.86 +0.5 4,344,852 + AO356_19345 0.89 -0.3 4,344,852 + AO356_19345 0.89 +0.1 4,344,852 + AO356_19345 0.89 +0.1 4,344,852 + AO356_19345 0.89 -0.3 4,344,853 - AO356_19345 0.89 -1.0 4,344,853 - AO356_19345 0.89 -0.2 4,344,872 - +0.3 4,344,872 - +0.9 4,344,888 + +0.3 4,344,888 + -1.3 4,344,888 + -0.7 4,344,888 + +1.0 4,344,889 - -0.4 4,344,889 - -2.0 4,344,909 + -1.0 4,344,909 + +0.1 4,344,909 + -0.5 4,344,910 - +0.3 4,344,910 - -0.5 4,344,910 - +0.0
Or see this region's nucleotide sequence