Experiment: Cisplatin 0.0032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_15765 and AO356_15770 are separated by 350 nucleotides AO356_15770 and AO356_15775 are separated by 132 nucleotides AO356_15775 and AO356_15780 are separated by 203 nucleotides
AO356_15765: AO356_15765 - ATP-dependent protease, at 3,573,067 to 3,575,505
_15765
AO356_15770: AO356_15770 - hypothetical protein, at 3,575,856 to 3,576,197
_15770
AO356_15775: AO356_15775 - hypothetical protein, at 3,576,330 to 3,576,818
_15775
AO356_15780: AO356_15780 - peptidylprolyl isomerase, at 3,577,022 to 3,577,639
_15780
Position (kb)
3575
3576
3577 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3574.933 kb on + strand, within AO356_15765 at 3575.002 kb on + strand, within AO356_15765 at 3575.002 kb on + strand, within AO356_15765 at 3575.002 kb on + strand, within AO356_15765 at 3575.002 kb on + strand, within AO356_15765 at 3575.002 kb on + strand, within AO356_15765 at 3575.002 kb on + strand, within AO356_15765 at 3575.003 kb on - strand, within AO356_15765 at 3575.003 kb on - strand, within AO356_15765 at 3575.003 kb on - strand, within AO356_15765 at 3575.009 kb on - strand, within AO356_15765 at 3575.009 kb on - strand, within AO356_15765 at 3575.046 kb on + strand, within AO356_15765 at 3575.046 kb on + strand, within AO356_15765 at 3575.046 kb on + strand, within AO356_15765 at 3575.046 kb on + strand, within AO356_15765 at 3575.047 kb on - strand, within AO356_15765 at 3575.047 kb on - strand, within AO356_15765 at 3575.047 kb on - strand, within AO356_15765 at 3575.047 kb on - strand, within AO356_15765 at 3575.293 kb on + strand at 3575.293 kb on + strand at 3575.293 kb on + strand at 3575.294 kb on - strand at 3575.294 kb on - strand at 3575.294 kb on - strand at 3575.668 kb on + strand at 3575.668 kb on + strand at 3575.668 kb on + strand at 3575.668 kb on + strand at 3575.668 kb on + strand at 3575.669 kb on - strand at 3575.669 kb on - strand at 3575.669 kb on - strand at 3575.669 kb on - strand at 3575.669 kb on - strand at 3575.701 kb on + strand at 3575.710 kb on + strand at 3575.711 kb on - strand at 3575.711 kb on - strand at 3575.711 kb on - strand at 3575.766 kb on + strand at 3575.766 kb on + strand at 3575.767 kb on - strand at 3575.767 kb on - strand at 3575.839 kb on + strand at 3575.839 kb on + strand at 3575.839 kb on + strand at 3575.840 kb on - strand at 3575.840 kb on - strand at 3575.939 kb on + strand, within AO356_15770 at 3575.940 kb on - strand, within AO356_15770 at 3575.945 kb on + strand, within AO356_15770 at 3575.945 kb on + strand, within AO356_15770 at 3575.946 kb on - strand, within AO356_15770 at 3575.946 kb on - strand, within AO356_15770 at 3575.946 kb on - strand, within AO356_15770 at 3575.946 kb on - strand, within AO356_15770 at 3575.946 kb on - strand, within AO356_15770 at 3576.291 kb on + strand at 3576.291 kb on + strand at 3576.292 kb on - strand at 3576.292 kb on - strand at 3576.292 kb on - strand at 3576.292 kb on - strand at 3576.292 kb on - strand at 3576.293 kb on + strand at 3576.293 kb on + strand at 3576.293 kb on + strand at 3576.293 kb on + strand at 3576.293 kb on + strand at 3576.293 kb on + strand at 3576.293 kb on + strand at 3576.293 kb on + strand at 3576.293 kb on + strand at 3576.293 kb on + strand at 3576.294 kb on - strand at 3576.294 kb on - strand at 3576.294 kb on - strand at 3576.294 kb on - strand at 3576.294 kb on - strand at 3576.294 kb on - strand at 3576.357 kb on + strand at 3576.357 kb on + strand at 3576.357 kb on + strand at 3576.357 kb on + strand at 3576.357 kb on + strand at 3576.357 kb on + strand at 3576.357 kb on + strand at 3576.357 kb on + strand at 3576.357 kb on + strand at 3576.357 kb on + strand at 3576.357 kb on + strand at 3576.357 kb on + strand at 3576.357 kb on + strand at 3576.357 kb on + strand at 3576.357 kb on + strand at 3576.357 kb on + strand at 3576.357 kb on + strand at 3576.358 kb on - strand at 3576.358 kb on - strand at 3576.358 kb on - strand at 3576.358 kb on - strand at 3576.358 kb on - strand at 3576.358 kb on - strand at 3576.358 kb on - strand at 3576.358 kb on - strand at 3576.358 kb on - strand at 3576.358 kb on - strand at 3576.358 kb on - strand at 3576.358 kb on - strand at 3576.358 kb on - strand at 3576.358 kb on - strand at 3576.358 kb on - strand at 3576.358 kb on - strand at 3576.387 kb on + strand, within AO356_15775 at 3576.387 kb on + strand, within AO356_15775 at 3576.388 kb on - strand, within AO356_15775 at 3576.548 kb on + strand, within AO356_15775 at 3576.548 kb on + strand, within AO356_15775 at 3576.548 kb on + strand, within AO356_15775 at 3576.548 kb on + strand, within AO356_15775 at 3576.744 kb on + strand, within AO356_15775 at 3576.744 kb on + strand, within AO356_15775 at 3576.744 kb on + strand, within AO356_15775 at 3576.744 kb on + strand, within AO356_15775 at 3576.744 kb on + strand, within AO356_15775 at 3576.744 kb on + strand, within AO356_15775 at 3576.744 kb on + strand, within AO356_15775 at 3576.744 kb on + strand, within AO356_15775 at 3576.745 kb on - strand, within AO356_15775 at 3576.745 kb on - strand, within AO356_15775 at 3576.745 kb on - strand, within AO356_15775 at 3576.745 kb on - strand, within AO356_15775 at 3576.745 kb on - strand, within AO356_15775 at 3576.745 kb on - strand, within AO356_15775 at 3576.792 kb on + strand at 3576.793 kb on - strand at 3576.931 kb on + strand at 3576.931 kb on + strand at 3576.931 kb on + strand at 3576.931 kb on + strand at 3577.033 kb on + strand at 3577.064 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.0032 mg/ml remove 3,574,933 + AO356_15765 0.77 +1.0 3,575,002 + AO356_15765 0.79 -0.4 3,575,002 + AO356_15765 0.79 -0.3 3,575,002 + AO356_15765 0.79 +0.4 3,575,002 + AO356_15765 0.79 -3.1 3,575,002 + AO356_15765 0.79 +0.2 3,575,002 + AO356_15765 0.79 -0.7 3,575,003 - AO356_15765 0.79 +0.8 3,575,003 - AO356_15765 0.79 +0.4 3,575,003 - AO356_15765 0.79 -1.9 3,575,009 - AO356_15765 0.80 +0.4 3,575,009 - AO356_15765 0.80 +0.2 3,575,046 + AO356_15765 0.81 -1.4 3,575,046 + AO356_15765 0.81 -1.3 3,575,046 + AO356_15765 0.81 -0.3 3,575,046 + AO356_15765 0.81 -0.3 3,575,047 - AO356_15765 0.81 +2.5 3,575,047 - AO356_15765 0.81 -0.5 3,575,047 - AO356_15765 0.81 -0.7 3,575,047 - AO356_15765 0.81 +1.0 3,575,293 + +0.8 3,575,293 + +0.6 3,575,293 + -0.1 3,575,294 - +0.3 3,575,294 - +0.5 3,575,294 - -0.1 3,575,668 + -1.0 3,575,668 + -0.4 3,575,668 + -1.0 3,575,668 + +0.3 3,575,668 + +0.7 3,575,669 - -0.8 3,575,669 - +0.9 3,575,669 - -0.7 3,575,669 - -0.2 3,575,669 - -0.5 3,575,701 + -0.1 3,575,710 + -0.1 3,575,711 - +0.7 3,575,711 - -0.8 3,575,711 - -0.0 3,575,766 + +0.4 3,575,766 + +1.2 3,575,767 - +3.2 3,575,767 - -0.1 3,575,839 + +0.8 3,575,839 + -1.4 3,575,839 + +0.3 3,575,840 - +0.6 3,575,840 - +1.2 3,575,939 + AO356_15770 0.24 -0.1 3,575,940 - AO356_15770 0.25 -0.1 3,575,945 + AO356_15770 0.26 +0.6 3,575,945 + AO356_15770 0.26 -0.5 3,575,946 - AO356_15770 0.26 +0.5 3,575,946 - AO356_15770 0.26 -0.2 3,575,946 - AO356_15770 0.26 +0.5 3,575,946 - AO356_15770 0.26 +0.9 3,575,946 - AO356_15770 0.26 -0.3 3,576,291 + +0.6 3,576,291 + -0.4 3,576,292 - -0.8 3,576,292 - +0.4 3,576,292 - -0.2 3,576,292 - +1.2 3,576,292 - -1.1 3,576,293 + +0.0 3,576,293 + -0.2 3,576,293 + -1.1 3,576,293 + -1.3 3,576,293 + +0.8 3,576,293 + +0.2 3,576,293 + -1.1 3,576,293 + -0.4 3,576,293 + -0.1 3,576,293 + +0.2 3,576,294 - -1.4 3,576,294 - -0.1 3,576,294 - +0.2 3,576,294 - -1.1 3,576,294 - -0.6 3,576,294 - -1.4 3,576,357 + -0.2 3,576,357 + +0.9 3,576,357 + -0.7 3,576,357 + +0.0 3,576,357 + +0.5 3,576,357 + -0.0 3,576,357 + +0.6 3,576,357 + -1.0 3,576,357 + -0.2 3,576,357 + +1.2 3,576,357 + +0.6 3,576,357 + -0.1 3,576,357 + +0.0 3,576,357 + +0.2 3,576,357 + +1.2 3,576,357 + +0.7 3,576,357 + +0.2 3,576,358 - +0.2 3,576,358 - +0.3 3,576,358 - -0.8 3,576,358 - -0.0 3,576,358 - -0.1 3,576,358 - +0.2 3,576,358 - -1.3 3,576,358 - -0.2 3,576,358 - -1.1 3,576,358 - -0.5 3,576,358 - -0.4 3,576,358 - -0.4 3,576,358 - +0.6 3,576,358 - +0.7 3,576,358 - -1.6 3,576,358 - -0.5 3,576,387 + AO356_15775 0.12 +0.2 3,576,387 + AO356_15775 0.12 +1.2 3,576,388 - AO356_15775 0.12 -0.8 3,576,548 + AO356_15775 0.45 +0.4 3,576,548 + AO356_15775 0.45 +0.9 3,576,548 + AO356_15775 0.45 +0.9 3,576,548 + AO356_15775 0.45 -0.5 3,576,744 + AO356_15775 0.85 -0.4 3,576,744 + AO356_15775 0.85 +1.1 3,576,744 + AO356_15775 0.85 -0.7 3,576,744 + AO356_15775 0.85 -0.6 3,576,744 + AO356_15775 0.85 -0.6 3,576,744 + AO356_15775 0.85 +1.2 3,576,744 + AO356_15775 0.85 -0.3 3,576,744 + AO356_15775 0.85 +0.2 3,576,745 - AO356_15775 0.85 -1.5 3,576,745 - AO356_15775 0.85 -0.8 3,576,745 - AO356_15775 0.85 -1.1 3,576,745 - AO356_15775 0.85 -0.6 3,576,745 - AO356_15775 0.85 -0.0 3,576,745 - AO356_15775 0.85 -1.5 3,576,792 + -1.0 3,576,793 - -0.7 3,576,931 + -0.4 3,576,931 + +0.2 3,576,931 + +0.7 3,576,931 + +0.3 3,577,033 + -0.5 3,577,064 + -0.1
Or see this region's nucleotide sequence