Experiment: Cisplatin 0.0032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_09745 and AO356_09750 are separated by 76 nucleotides AO356_09750 and AO356_09755 are separated by 203 nucleotides AO356_09755 and AO356_09760 are separated by 39 nucleotides AO356_09760 and AO356_09765 are separated by 1 nucleotides AO356_09765 and AO356_09770 are separated by 152 nucleotides
AO356_09745: AO356_09745 - hypothetical protein, at 2,211,657 to 2,212,019
_09745
AO356_09750: AO356_09750 - rRNA methylase, at 2,212,096 to 2,212,551
_09750
AO356_09755: AO356_09755 - preprotein translocase subunit SecB, at 2,212,755 to 2,213,237
_09755
AO356_09760: AO356_09760 - glutaredoxin, at 2,213,277 to 2,213,531
_09760
AO356_09765: AO356_09765 - sulfurtransferase, at 2,213,533 to 2,213,946
_09765
AO356_09770: AO356_09770 - 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, at 2,214,099 to 2,215,628
_09770
Position (kb)
2212
2213
2214 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2212.032 kb on + strand at 2212.032 kb on + strand at 2212.032 kb on + strand at 2212.033 kb on - strand at 2212.033 kb on - strand at 2212.033 kb on - strand at 2212.033 kb on - strand at 2212.033 kb on - strand at 2212.033 kb on - strand at 2212.033 kb on - strand at 2212.061 kb on + strand at 2212.061 kb on + strand at 2212.061 kb on + strand at 2212.061 kb on + strand at 2212.062 kb on - strand at 2212.062 kb on - strand at 2212.079 kb on + strand at 2212.080 kb on - strand at 2212.080 kb on - strand at 2212.080 kb on - strand at 2212.080 kb on - strand at 2212.080 kb on - strand at 2212.247 kb on - strand, within AO356_09750 at 2212.255 kb on + strand, within AO356_09750 at 2212.255 kb on + strand, within AO356_09750 at 2212.255 kb on + strand, within AO356_09750 at 2212.255 kb on + strand, within AO356_09750 at 2212.255 kb on + strand, within AO356_09750 at 2212.256 kb on - strand, within AO356_09750 at 2212.256 kb on - strand, within AO356_09750 at 2212.256 kb on - strand, within AO356_09750 at 2212.329 kb on + strand, within AO356_09750 at 2212.329 kb on + strand, within AO356_09750 at 2212.330 kb on - strand, within AO356_09750 at 2212.425 kb on - strand, within AO356_09750 at 2212.501 kb on - strand, within AO356_09750 at 2212.501 kb on - strand, within AO356_09750 at 2212.519 kb on + strand at 2212.520 kb on - strand at 2212.520 kb on - strand at 2212.737 kb on - strand at 2212.737 kb on - strand at 2212.749 kb on - strand at 2212.749 kb on - strand at 2212.749 kb on - strand at 2212.757 kb on - strand at 2212.807 kb on + strand, within AO356_09755 at 2212.808 kb on - strand, within AO356_09755 at 2213.097 kb on + strand, within AO356_09755 at 2213.098 kb on - strand, within AO356_09755 at 2213.167 kb on + strand, within AO356_09755 at 2213.167 kb on + strand, within AO356_09755 at 2213.167 kb on + strand, within AO356_09755 at 2213.167 kb on + strand, within AO356_09755 at 2213.167 kb on + strand, within AO356_09755 at 2213.167 kb on + strand, within AO356_09755 at 2213.167 kb on + strand, within AO356_09755 at 2213.167 kb on + strand, within AO356_09755 at 2213.168 kb on - strand, within AO356_09755 at 2213.168 kb on - strand, within AO356_09755 at 2213.168 kb on - strand, within AO356_09755 at 2213.168 kb on - strand, within AO356_09755 at 2213.251 kb on + strand at 2213.251 kb on + strand at 2213.252 kb on - strand at 2213.252 kb on - strand at 2213.266 kb on + strand at 2213.492 kb on - strand, within AO356_09760 at 2213.492 kb on - strand, within AO356_09760 at 2213.500 kb on + strand, within AO356_09760 at 2213.500 kb on + strand, within AO356_09760 at 2213.500 kb on + strand, within AO356_09760 at 2213.500 kb on + strand, within AO356_09760 at 2213.501 kb on - strand, within AO356_09760 at 2213.512 kb on + strand at 2213.598 kb on + strand, within AO356_09765 at 2213.759 kb on + strand, within AO356_09765 at 2213.759 kb on + strand, within AO356_09765 at 2213.760 kb on - strand, within AO356_09765 at 2213.895 kb on + strand, within AO356_09765 at 2213.909 kb on + strand at 2213.909 kb on + strand at 2213.909 kb on + strand at 2213.909 kb on + strand at 2213.909 kb on + strand at 2213.909 kb on + strand at 2213.909 kb on + strand at 2213.910 kb on - strand at 2213.910 kb on - strand at 2213.910 kb on - strand at 2213.917 kb on - strand at 2213.968 kb on - strand at 2213.982 kb on + strand at 2213.982 kb on + strand at 2213.983 kb on - strand at 2213.983 kb on - strand at 2213.983 kb on - strand at 2213.984 kb on + strand at 2213.984 kb on + strand at 2213.984 kb on + strand at 2213.984 kb on + strand at 2213.984 kb on + strand at 2213.984 kb on + strand at 2213.984 kb on + strand at 2213.984 kb on + strand at 2213.984 kb on + strand at 2213.984 kb on + strand at 2213.984 kb on + strand at 2213.984 kb on + strand at 2213.984 kb on + strand at 2213.984 kb on + strand at 2213.985 kb on - strand at 2213.985 kb on - strand at 2213.985 kb on - strand at 2213.985 kb on - strand at 2214.038 kb on + strand at 2214.038 kb on + strand at 2214.038 kb on + strand at 2214.039 kb on - strand at 2214.039 kb on - strand at 2214.039 kb on - strand at 2214.039 kb on - strand at 2214.044 kb on + strand at 2214.044 kb on + strand at 2214.045 kb on - strand at 2214.045 kb on - strand at 2214.045 kb on - strand at 2214.104 kb on + strand at 2214.104 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.0032 mg/ml remove 2,212,032 + +0.5 2,212,032 + -1.2 2,212,032 + +0.5 2,212,033 - +0.2 2,212,033 - +1.2 2,212,033 - +0.1 2,212,033 - -1.5 2,212,033 - +1.3 2,212,033 - -0.6 2,212,033 - +1.2 2,212,061 + +0.0 2,212,061 + -0.9 2,212,061 + +0.2 2,212,061 + +1.0 2,212,062 - -0.1 2,212,062 - -0.5 2,212,079 + +0.2 2,212,080 - +0.1 2,212,080 - -0.4 2,212,080 - +0.2 2,212,080 - -0.6 2,212,080 - -0.6 2,212,247 - AO356_09750 0.33 +1.8 2,212,255 + AO356_09750 0.35 +0.9 2,212,255 + AO356_09750 0.35 -0.0 2,212,255 + AO356_09750 0.35 +0.7 2,212,255 + AO356_09750 0.35 -1.8 2,212,255 + AO356_09750 0.35 +0.6 2,212,256 - AO356_09750 0.35 +0.7 2,212,256 - AO356_09750 0.35 -0.4 2,212,256 - AO356_09750 0.35 +0.6 2,212,329 + AO356_09750 0.51 +0.0 2,212,329 + AO356_09750 0.51 +0.4 2,212,330 - AO356_09750 0.51 +0.2 2,212,425 - AO356_09750 0.72 +0.2 2,212,501 - AO356_09750 0.89 +2.1 2,212,501 - AO356_09750 0.89 +0.3 2,212,519 + +1.6 2,212,520 - +0.5 2,212,520 - -0.2 2,212,737 - +0.2 2,212,737 - -0.8 2,212,749 - -1.6 2,212,749 - -0.2 2,212,749 - +0.4 2,212,757 - -0.1 2,212,807 + AO356_09755 0.11 +0.5 2,212,808 - AO356_09755 0.11 +0.7 2,213,097 + AO356_09755 0.71 +2.2 2,213,098 - AO356_09755 0.71 +1.2 2,213,167 + AO356_09755 0.85 +0.9 2,213,167 + AO356_09755 0.85 -0.0 2,213,167 + AO356_09755 0.85 -1.2 2,213,167 + AO356_09755 0.85 +0.4 2,213,167 + AO356_09755 0.85 +1.4 2,213,167 + AO356_09755 0.85 +0.4 2,213,167 + AO356_09755 0.85 +0.4 2,213,167 + AO356_09755 0.85 +3.0 2,213,168 - AO356_09755 0.86 -0.1 2,213,168 - AO356_09755 0.86 +0.5 2,213,168 - AO356_09755 0.86 +1.1 2,213,168 - AO356_09755 0.86 +0.0 2,213,251 + +0.7 2,213,251 + -0.0 2,213,252 - -0.4 2,213,252 - -1.0 2,213,266 + +0.6 2,213,492 - AO356_09760 0.84 +1.2 2,213,492 - AO356_09760 0.84 -0.0 2,213,500 + AO356_09760 0.87 -0.3 2,213,500 + AO356_09760 0.87 +0.2 2,213,500 + AO356_09760 0.87 -0.2 2,213,500 + AO356_09760 0.87 +0.2 2,213,501 - AO356_09760 0.88 +0.9 2,213,512 + -0.6 2,213,598 + AO356_09765 0.16 -1.9 2,213,759 + AO356_09765 0.55 +0.1 2,213,759 + AO356_09765 0.55 +1.0 2,213,760 - AO356_09765 0.55 +1.6 2,213,895 + AO356_09765 0.87 +1.4 2,213,909 + +0.6 2,213,909 + -0.1 2,213,909 + +0.5 2,213,909 + -1.4 2,213,909 + -0.2 2,213,909 + +1.0 2,213,909 + -0.4 2,213,910 - -0.0 2,213,910 - +0.5 2,213,910 - +0.6 2,213,917 - -0.6 2,213,968 - -0.0 2,213,982 + +1.7 2,213,982 + +1.4 2,213,983 - +1.9 2,213,983 - +0.1 2,213,983 - +0.0 2,213,984 + +0.7 2,213,984 + +0.6 2,213,984 + +0.8 2,213,984 + +1.0 2,213,984 + +1.6 2,213,984 + +1.8 2,213,984 + +0.6 2,213,984 + +0.6 2,213,984 + +1.2 2,213,984 + +0.5 2,213,984 + +1.4 2,213,984 + +0.9 2,213,984 + -0.2 2,213,984 + -0.2 2,213,985 - -0.6 2,213,985 - +0.4 2,213,985 - +0.2 2,213,985 - +0.2 2,214,038 + +0.1 2,214,038 + -0.4 2,214,038 + -1.4 2,214,039 - -0.3 2,214,039 - +0.7 2,214,039 - -0.2 2,214,039 - -1.2 2,214,044 + +1.2 2,214,044 + +0.6 2,214,045 - +0.6 2,214,045 - -1.2 2,214,045 - +0.5 2,214,104 + +0.0 2,214,104 + +0.9
Or see this region's nucleotide sequence