Experiment: Cisplatin 0.0032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_08525 and AO356_08530 are separated by 174 nucleotides AO356_08530 and AO356_08535 are separated by 341 nucleotides AO356_08535 and AO356_08540 are separated by 68 nucleotides AO356_08540 and AO356_08545 are separated by 73 nucleotides AO356_08545 and AO356_08550 are separated by 142 nucleotides
AO356_08525: AO356_08525 - NAD synthetase, at 1,917,900 to 1,918,727
_08525
AO356_08530: AO356_08530 - azurin, at 1,918,902 to 1,919,348
_08530
AO356_08535: AO356_08535 - LOG family protein, at 1,919,690 to 1,920,277
_08535
AO356_08540: AO356_08540 - hypothetical protein, at 1,920,346 to 1,920,534
_08540
AO356_08545: AO356_08545 - NUDIX hydrolase, at 1,920,608 to 1,920,985
_08545
AO356_08550: AO356_08550 - transglutaminase, at 1,921,128 to 1,922,021
_08550
Position (kb)
1919
1920
1921 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1918.857 kb on - strand at 1918.937 kb on + strand at 1918.937 kb on + strand at 1918.937 kb on + strand at 1918.937 kb on + strand at 1919.074 kb on + strand, within AO356_08530 at 1919.074 kb on + strand, within AO356_08530 at 1919.074 kb on + strand, within AO356_08530 at 1919.074 kb on + strand, within AO356_08530 at 1919.075 kb on - strand, within AO356_08530 at 1919.075 kb on - strand, within AO356_08530 at 1919.150 kb on + strand, within AO356_08530 at 1919.151 kb on - strand, within AO356_08530 at 1919.151 kb on - strand, within AO356_08530 at 1919.326 kb on - strand at 1919.326 kb on - strand at 1919.450 kb on + strand at 1919.457 kb on - strand at 1919.473 kb on + strand at 1919.474 kb on - strand at 1919.474 kb on - strand at 1919.474 kb on - strand at 1919.491 kb on + strand at 1919.491 kb on + strand at 1919.491 kb on + strand at 1919.491 kb on + strand at 1919.492 kb on - strand at 1919.492 kb on - strand at 1919.504 kb on + strand at 1919.504 kb on + strand at 1919.504 kb on + strand at 1919.504 kb on + strand at 1919.505 kb on - strand at 1919.505 kb on - strand at 1919.505 kb on - strand at 1919.550 kb on + strand at 1919.558 kb on + strand at 1919.558 kb on + strand at 1919.578 kb on + strand at 1919.602 kb on + strand at 1919.602 kb on + strand at 1919.602 kb on + strand at 1919.602 kb on + strand at 1919.603 kb on - strand at 1919.603 kb on - strand at 1919.603 kb on - strand at 1919.626 kb on + strand at 1919.626 kb on + strand at 1919.626 kb on + strand at 1919.626 kb on + strand at 1919.626 kb on + strand at 1919.626 kb on + strand at 1919.627 kb on - strand at 1919.644 kb on + strand at 1919.645 kb on - strand at 1919.645 kb on - strand at 1919.645 kb on - strand at 1919.645 kb on - strand at 1919.656 kb on + strand at 1919.657 kb on - strand at 1919.657 kb on - strand at 1919.684 kb on + strand at 1919.684 kb on + strand at 1919.684 kb on + strand at 1919.685 kb on - strand at 1919.685 kb on - strand at 1919.685 kb on - strand at 1919.685 kb on - strand at 1919.747 kb on + strand at 1919.747 kb on + strand at 1919.748 kb on - strand at 1920.110 kb on + strand, within AO356_08535 at 1920.139 kb on + strand, within AO356_08535 at 1920.139 kb on + strand, within AO356_08535 at 1920.139 kb on + strand, within AO356_08535 at 1920.139 kb on + strand, within AO356_08535 at 1920.140 kb on - strand, within AO356_08535 at 1920.140 kb on - strand, within AO356_08535 at 1920.243 kb on + strand at 1920.243 kb on + strand at 1920.244 kb on - strand at 1920.244 kb on - strand at 1920.304 kb on + strand at 1920.304 kb on + strand at 1920.305 kb on - strand at 1920.305 kb on - strand at 1920.305 kb on - strand at 1920.305 kb on - strand at 1920.361 kb on + strand at 1920.361 kb on + strand at 1920.361 kb on + strand at 1920.361 kb on + strand at 1920.362 kb on - strand at 1920.362 kb on - strand at 1920.362 kb on - strand at 1920.362 kb on - strand at 1920.362 kb on - strand at 1920.482 kb on + strand, within AO356_08540 at 1920.483 kb on - strand, within AO356_08540 at 1920.483 kb on - strand, within AO356_08540 at 1920.483 kb on - strand, within AO356_08540 at 1920.483 kb on - strand, within AO356_08540 at 1920.609 kb on + strand at 1920.609 kb on + strand at 1920.609 kb on + strand at 1920.609 kb on + strand at 1920.609 kb on + strand at 1920.609 kb on + strand at 1920.609 kb on + strand at 1920.610 kb on - strand at 1920.610 kb on - strand at 1920.628 kb on + strand at 1920.748 kb on - strand, within AO356_08545 at 1920.748 kb on - strand, within AO356_08545 at 1920.792 kb on + strand, within AO356_08545 at 1920.792 kb on + strand, within AO356_08545 at 1920.792 kb on + strand, within AO356_08545 at 1920.792 kb on + strand, within AO356_08545 at 1920.793 kb on - strand, within AO356_08545 at 1921.003 kb on - strand at 1921.010 kb on + strand at 1921.010 kb on + strand at 1921.011 kb on - strand at 1921.011 kb on - strand at 1921.011 kb on - strand at 1921.011 kb on - strand at 1921.011 kb on - strand at 1921.011 kb on - strand at 1921.011 kb on - strand at 1921.011 kb on - strand at 1921.108 kb on + strand at 1921.108 kb on + strand at 1921.108 kb on + strand at 1921.109 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.0032 mg/ml remove 1,918,857 - +0.4 1,918,937 + +1.2 1,918,937 + -0.0 1,918,937 + +0.2 1,918,937 + -1.0 1,919,074 + AO356_08530 0.38 +1.6 1,919,074 + AO356_08530 0.38 +0.7 1,919,074 + AO356_08530 0.38 -0.3 1,919,074 + AO356_08530 0.38 +1.5 1,919,075 - AO356_08530 0.39 +1.6 1,919,075 - AO356_08530 0.39 -0.2 1,919,150 + AO356_08530 0.55 -0.5 1,919,151 - AO356_08530 0.56 +1.1 1,919,151 - AO356_08530 0.56 -0.1 1,919,326 - +0.5 1,919,326 - -0.2 1,919,450 + +0.2 1,919,457 - +0.6 1,919,473 + +0.5 1,919,474 - +0.6 1,919,474 - +1.5 1,919,474 - -0.7 1,919,491 + +0.5 1,919,491 + +2.1 1,919,491 + -0.1 1,919,491 + +0.2 1,919,492 - -0.1 1,919,492 - +0.7 1,919,504 + +0.3 1,919,504 + +0.8 1,919,504 + +0.4 1,919,504 + -0.5 1,919,505 - -1.6 1,919,505 - -0.0 1,919,505 - +0.5 1,919,550 + +0.3 1,919,558 + +1.3 1,919,558 + +1.8 1,919,578 + +0.0 1,919,602 + -0.9 1,919,602 + +0.2 1,919,602 + -0.1 1,919,602 + +2.8 1,919,603 - +1.2 1,919,603 - +0.6 1,919,603 - +0.2 1,919,626 + -0.8 1,919,626 + +1.1 1,919,626 + +1.6 1,919,626 + +0.6 1,919,626 + +0.9 1,919,626 + -1.2 1,919,627 - -0.5 1,919,644 + -0.8 1,919,645 - +0.5 1,919,645 - +0.6 1,919,645 - -0.2 1,919,645 - +0.6 1,919,656 + +0.2 1,919,657 - +0.6 1,919,657 - +0.8 1,919,684 + +0.1 1,919,684 + +0.6 1,919,684 + +1.0 1,919,685 - -1.3 1,919,685 - +0.0 1,919,685 - +0.3 1,919,685 - -1.4 1,919,747 + -0.0 1,919,747 + -0.5 1,919,748 - -1.7 1,920,110 + AO356_08535 0.71 -0.3 1,920,139 + AO356_08535 0.76 +1.6 1,920,139 + AO356_08535 0.76 -0.0 1,920,139 + AO356_08535 0.76 -0.6 1,920,139 + AO356_08535 0.76 -0.0 1,920,140 - AO356_08535 0.77 -0.1 1,920,140 - AO356_08535 0.77 +0.8 1,920,243 + -1.8 1,920,243 + +0.9 1,920,244 - -0.3 1,920,244 - -0.5 1,920,304 + +0.3 1,920,304 + -0.5 1,920,305 - -0.3 1,920,305 - -0.4 1,920,305 - -0.3 1,920,305 - -1.2 1,920,361 + +0.2 1,920,361 + -1.8 1,920,361 + +0.6 1,920,361 + -0.1 1,920,362 - +0.2 1,920,362 - -0.8 1,920,362 - -0.7 1,920,362 - -0.2 1,920,362 - +0.9 1,920,482 + AO356_08540 0.72 -1.7 1,920,483 - AO356_08540 0.72 +0.0 1,920,483 - AO356_08540 0.72 -0.2 1,920,483 - AO356_08540 0.72 -0.3 1,920,483 - AO356_08540 0.72 +0.5 1,920,609 + -0.7 1,920,609 + +1.2 1,920,609 + -0.1 1,920,609 + +2.2 1,920,609 + +0.2 1,920,609 + +0.1 1,920,609 + -0.6 1,920,610 - -1.2 1,920,610 - -3.5 1,920,628 + +0.2 1,920,748 - AO356_08545 0.37 -0.2 1,920,748 - AO356_08545 0.37 -0.5 1,920,792 + AO356_08545 0.49 -0.5 1,920,792 + AO356_08545 0.49 -0.5 1,920,792 + AO356_08545 0.49 -0.7 1,920,792 + AO356_08545 0.49 -0.3 1,920,793 - AO356_08545 0.49 +0.8 1,921,003 - -0.4 1,921,010 + -1.4 1,921,010 + +0.8 1,921,011 - +0.5 1,921,011 - -1.5 1,921,011 - +0.3 1,921,011 - +2.8 1,921,011 - +0.3 1,921,011 - +0.6 1,921,011 - +0.3 1,921,011 - -0.2 1,921,108 + +1.6 1,921,108 + +0.0 1,921,108 + +0.0 1,921,109 - -0.2
Or see this region's nucleotide sequence