Experiment: Cisplatin 0.0032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_06830 and AO356_06835 are separated by 200 nucleotides AO356_06835 and AO356_06840 are separated by 97 nucleotides AO356_06840 and AO356_06845 are separated by 122 nucleotides
AO356_06830: AO356_06830 - hypothetical protein, at 1,508,125 to 1,509,174
_06830
AO356_06835: AO356_06835 - GntR family transcriptional regulator, at 1,509,375 to 1,510,088
_06835
AO356_06840: AO356_06840 - GntR family transcriptional regulator, at 1,510,186 to 1,510,929
_06840
AO356_06845: AO356_06845 - porin, at 1,511,052 to 1,511,774
_06845
Position (kb)
1509
1510
1511 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1508.438 kb on - strand, within AO356_06830 at 1508.715 kb on + strand, within AO356_06830 at 1508.716 kb on - strand, within AO356_06830 at 1508.770 kb on + strand, within AO356_06830 at 1508.770 kb on + strand, within AO356_06830 at 1508.770 kb on + strand, within AO356_06830 at 1508.771 kb on - strand, within AO356_06830 at 1508.771 kb on - strand, within AO356_06830 at 1508.842 kb on + strand, within AO356_06830 at 1508.842 kb on + strand, within AO356_06830 at 1508.932 kb on + strand, within AO356_06830 at 1508.933 kb on - strand, within AO356_06830 at 1508.933 kb on - strand, within AO356_06830 at 1509.052 kb on + strand, within AO356_06830 at 1509.052 kb on + strand, within AO356_06830 at 1509.053 kb on - strand, within AO356_06830 at 1509.053 kb on - strand, within AO356_06830 at 1509.053 kb on - strand, within AO356_06830 at 1509.090 kb on - strand at 1509.172 kb on + strand at 1509.172 kb on + strand at 1509.173 kb on - strand at 1509.173 kb on - strand at 1509.238 kb on - strand at 1509.377 kb on - strand at 1509.419 kb on + strand at 1509.420 kb on - strand at 1509.420 kb on - strand at 1509.420 kb on - strand at 1509.485 kb on - strand, within AO356_06835 at 1509.569 kb on + strand, within AO356_06835 at 1509.569 kb on + strand, within AO356_06835 at 1509.569 kb on + strand, within AO356_06835 at 1509.569 kb on + strand, within AO356_06835 at 1509.805 kb on + strand, within AO356_06835 at 1509.805 kb on + strand, within AO356_06835 at 1509.805 kb on + strand, within AO356_06835 at 1509.806 kb on - strand, within AO356_06835 at 1509.806 kb on - strand, within AO356_06835 at 1509.872 kb on + strand, within AO356_06835 at 1509.984 kb on + strand, within AO356_06835 at 1509.984 kb on + strand, within AO356_06835 at 1510.095 kb on + strand at 1510.096 kb on - strand at 1510.124 kb on + strand at 1510.125 kb on - strand at 1510.126 kb on + strand at 1510.127 kb on - strand at 1510.127 kb on - strand at 1510.153 kb on + strand at 1510.153 kb on + strand at 1510.153 kb on + strand at 1510.154 kb on - strand at 1510.155 kb on + strand at 1510.155 kb on + strand at 1510.155 kb on + strand at 1510.156 kb on - strand at 1510.156 kb on - strand at 1510.203 kb on - strand at 1510.314 kb on + strand, within AO356_06840 at 1510.314 kb on + strand, within AO356_06840 at 1510.314 kb on + strand, within AO356_06840 at 1510.314 kb on + strand, within AO356_06840 at 1510.314 kb on + strand, within AO356_06840 at 1510.315 kb on - strand, within AO356_06840 at 1510.315 kb on - strand, within AO356_06840 at 1510.315 kb on - strand, within AO356_06840 at 1510.315 kb on - strand, within AO356_06840 at 1510.678 kb on + strand, within AO356_06840 at 1510.678 kb on + strand, within AO356_06840 at 1510.678 kb on + strand, within AO356_06840 at 1510.679 kb on - strand, within AO356_06840 at 1510.679 kb on - strand, within AO356_06840 at 1510.679 kb on - strand, within AO356_06840 at 1510.679 kb on - strand, within AO356_06840 at 1510.681 kb on + strand, within AO356_06840 at 1510.682 kb on - strand, within AO356_06840 at 1510.692 kb on + strand, within AO356_06840 at 1510.748 kb on - strand, within AO356_06840 at 1510.774 kb on + strand, within AO356_06840 at 1510.775 kb on - strand, within AO356_06840 at 1510.858 kb on + strand at 1510.858 kb on + strand at 1510.858 kb on + strand at 1510.858 kb on + strand at 1510.859 kb on - strand at 1510.859 kb on - strand at 1510.919 kb on - strand at 1510.919 kb on - strand at 1510.927 kb on + strand at 1511.065 kb on + strand at 1511.065 kb on + strand at 1511.065 kb on + strand at 1511.065 kb on + strand at 1511.066 kb on - strand at 1511.066 kb on - strand at 1511.066 kb on - strand at 1511.066 kb on - strand at 1511.066 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.0032 mg/ml remove 1,508,438 - AO356_06830 0.30 -0.7 1,508,715 + AO356_06830 0.56 -1.4 1,508,716 - AO356_06830 0.56 -0.7 1,508,770 + AO356_06830 0.61 +0.7 1,508,770 + AO356_06830 0.61 -0.4 1,508,770 + AO356_06830 0.61 +0.0 1,508,771 - AO356_06830 0.62 +0.9 1,508,771 - AO356_06830 0.62 -0.3 1,508,842 + AO356_06830 0.68 -0.9 1,508,842 + AO356_06830 0.68 +0.2 1,508,932 + AO356_06830 0.77 +2.0 1,508,933 - AO356_06830 0.77 +0.0 1,508,933 - AO356_06830 0.77 +1.0 1,509,052 + AO356_06830 0.88 -0.5 1,509,052 + AO356_06830 0.88 -0.2 1,509,053 - AO356_06830 0.88 -0.7 1,509,053 - AO356_06830 0.88 +0.8 1,509,053 - AO356_06830 0.88 -0.2 1,509,090 - +1.7 1,509,172 + +0.4 1,509,172 + -0.1 1,509,173 - +0.4 1,509,173 - -1.1 1,509,238 - -0.5 1,509,377 - +0.1 1,509,419 + +0.1 1,509,420 - +1.7 1,509,420 - -0.1 1,509,420 - -0.0 1,509,485 - AO356_06835 0.15 -0.3 1,509,569 + AO356_06835 0.27 +0.4 1,509,569 + AO356_06835 0.27 +0.5 1,509,569 + AO356_06835 0.27 +1.1 1,509,569 + AO356_06835 0.27 +0.0 1,509,805 + AO356_06835 0.60 +0.0 1,509,805 + AO356_06835 0.60 -0.6 1,509,805 + AO356_06835 0.60 -0.7 1,509,806 - AO356_06835 0.60 -1.2 1,509,806 - AO356_06835 0.60 -1.8 1,509,872 + AO356_06835 0.70 +0.1 1,509,984 + AO356_06835 0.85 +0.6 1,509,984 + AO356_06835 0.85 +1.1 1,510,095 + -0.9 1,510,096 - -0.1 1,510,124 + -0.6 1,510,125 - +1.1 1,510,126 + -0.2 1,510,127 - -0.3 1,510,127 - +0.7 1,510,153 + +0.5 1,510,153 + -0.9 1,510,153 + +0.1 1,510,154 - -0.0 1,510,155 + +0.2 1,510,155 + -0.1 1,510,155 + +0.2 1,510,156 - +0.1 1,510,156 - +0.5 1,510,203 - +0.1 1,510,314 + AO356_06840 0.17 -0.2 1,510,314 + AO356_06840 0.17 +0.1 1,510,314 + AO356_06840 0.17 -0.7 1,510,314 + AO356_06840 0.17 +0.1 1,510,314 + AO356_06840 0.17 -0.4 1,510,315 - AO356_06840 0.17 -0.5 1,510,315 - AO356_06840 0.17 +0.9 1,510,315 - AO356_06840 0.17 +0.4 1,510,315 - AO356_06840 0.17 +0.3 1,510,678 + AO356_06840 0.66 +1.3 1,510,678 + AO356_06840 0.66 +1.1 1,510,678 + AO356_06840 0.66 -0.1 1,510,679 - AO356_06840 0.66 +1.0 1,510,679 - AO356_06840 0.66 -0.4 1,510,679 - AO356_06840 0.66 -0.8 1,510,679 - AO356_06840 0.66 -0.6 1,510,681 + AO356_06840 0.67 -0.8 1,510,682 - AO356_06840 0.67 +0.5 1,510,692 + AO356_06840 0.68 -0.6 1,510,748 - AO356_06840 0.76 -0.6 1,510,774 + AO356_06840 0.79 +1.2 1,510,775 - AO356_06840 0.79 +0.1 1,510,858 + +1.0 1,510,858 + +0.2 1,510,858 + +0.1 1,510,858 + +0.5 1,510,859 - +0.7 1,510,859 - +0.6 1,510,919 - +1.4 1,510,919 - -0.6 1,510,927 + -0.6 1,511,065 + -1.9 1,511,065 + +0.3 1,511,065 + +0.1 1,511,065 + -0.5 1,511,066 - -0.8 1,511,066 - +0.7 1,511,066 - -0.5 1,511,066 - -0.1 1,511,066 - +0.1
Or see this region's nucleotide sequence