Experiment: Cisplatin 0.0032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_06495 and AO356_06500 are separated by 169 nucleotides AO356_06500 and AO356_06505 are separated by 56 nucleotides AO356_06505 and AO356_06510 are separated by 105 nucleotides
AO356_06495: AO356_06495 - alpha/beta hydrolase, at 1,437,882 to 1,438,727
_06495
AO356_06500: AO356_06500 - antibiotic biosynthesis monooxygenase, at 1,438,897 to 1,439,274
_06500
AO356_06505: AO356_06505 - pyridine nucleotide-disulfide oxidoreductase, at 1,439,331 to 1,440,224
_06505
AO356_06510: AO356_06510 - TetR family transcriptional regulator, at 1,440,330 to 1,440,959
_06510
Position (kb)
1439
1440
1441 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1438.408 kb on + strand, within AO356_06495 at 1438.408 kb on + strand, within AO356_06495 at 1438.408 kb on + strand, within AO356_06495 at 1438.409 kb on - strand, within AO356_06495 at 1438.409 kb on - strand, within AO356_06495 at 1438.688 kb on + strand at 1438.864 kb on + strand at 1438.887 kb on - strand at 1438.887 kb on - strand at 1439.042 kb on + strand, within AO356_06500 at 1439.042 kb on + strand, within AO356_06500 at 1439.042 kb on + strand, within AO356_06500 at 1439.042 kb on + strand, within AO356_06500 at 1439.042 kb on + strand, within AO356_06500 at 1439.042 kb on + strand, within AO356_06500 at 1439.042 kb on + strand, within AO356_06500 at 1439.042 kb on + strand, within AO356_06500 at 1439.042 kb on + strand, within AO356_06500 at 1439.043 kb on - strand, within AO356_06500 at 1439.043 kb on - strand, within AO356_06500 at 1439.043 kb on - strand, within AO356_06500 at 1439.043 kb on - strand, within AO356_06500 at 1439.043 kb on - strand, within AO356_06500 at 1439.043 kb on - strand, within AO356_06500 at 1439.043 kb on - strand, within AO356_06500 at 1439.043 kb on - strand, within AO356_06500 at 1439.043 kb on - strand, within AO356_06500 at 1439.043 kb on - strand, within AO356_06500 at 1439.043 kb on - strand, within AO356_06500 at 1439.179 kb on + strand, within AO356_06500 at 1439.179 kb on + strand, within AO356_06500 at 1439.179 kb on + strand, within AO356_06500 at 1439.179 kb on + strand, within AO356_06500 at 1439.180 kb on - strand, within AO356_06500 at 1439.180 kb on - strand, within AO356_06500 at 1439.180 kb on - strand, within AO356_06500 at 1439.180 kb on - strand, within AO356_06500 at 1439.180 kb on - strand, within AO356_06500 at 1439.187 kb on + strand, within AO356_06500 at 1439.187 kb on + strand, within AO356_06500 at 1439.187 kb on + strand, within AO356_06500 at 1439.187 kb on + strand, within AO356_06500 at 1439.188 kb on - strand, within AO356_06500 at 1439.188 kb on - strand, within AO356_06500 at 1439.188 kb on - strand, within AO356_06500 at 1439.188 kb on - strand, within AO356_06500 at 1439.188 kb on - strand, within AO356_06500 at 1439.188 kb on - strand, within AO356_06500 at 1439.188 kb on - strand, within AO356_06500 at 1439.191 kb on + strand, within AO356_06500 at 1439.191 kb on + strand, within AO356_06500 at 1439.191 kb on + strand, within AO356_06500 at 1439.192 kb on - strand, within AO356_06500 at 1439.192 kb on - strand, within AO356_06500 at 1439.434 kb on + strand, within AO356_06505 at 1439.435 kb on - strand, within AO356_06505 at 1439.435 kb on - strand, within AO356_06505 at 1439.435 kb on - strand, within AO356_06505 at 1439.435 kb on - strand, within AO356_06505 at 1439.435 kb on - strand, within AO356_06505 at 1439.750 kb on - strand, within AO356_06505 at 1439.761 kb on + strand, within AO356_06505 at 1439.761 kb on + strand, within AO356_06505 at 1439.761 kb on + strand, within AO356_06505 at 1439.762 kb on - strand, within AO356_06505 at 1439.762 kb on - strand, within AO356_06505 at 1439.762 kb on - strand, within AO356_06505 at 1439.762 kb on - strand, within AO356_06505 at 1439.762 kb on - strand, within AO356_06505 at 1439.762 kb on - strand, within AO356_06505 at 1439.762 kb on - strand, within AO356_06505 at 1439.762 kb on - strand, within AO356_06505 at 1439.762 kb on - strand, within AO356_06505 at 1439.830 kb on + strand, within AO356_06505 at 1439.830 kb on + strand, within AO356_06505 at 1439.905 kb on + strand, within AO356_06505 at 1439.905 kb on + strand, within AO356_06505 at 1439.905 kb on + strand, within AO356_06505 at 1439.906 kb on - strand, within AO356_06505 at 1439.906 kb on - strand, within AO356_06505 at 1439.906 kb on - strand, within AO356_06505 at 1440.271 kb on + strand at 1440.380 kb on - strand at 1440.472 kb on + strand, within AO356_06510 at 1440.489 kb on + strand, within AO356_06510 at 1440.489 kb on + strand, within AO356_06510 at 1440.489 kb on + strand, within AO356_06510 at 1440.489 kb on + strand, within AO356_06510 at 1440.490 kb on - strand, within AO356_06510 at 1440.490 kb on - strand, within AO356_06510 at 1440.490 kb on - strand, within AO356_06510 at 1440.570 kb on - strand, within AO356_06510 at 1440.570 kb on - strand, within AO356_06510 at 1440.735 kb on + strand, within AO356_06510 at 1440.735 kb on + strand, within AO356_06510 at 1440.735 kb on + strand, within AO356_06510 at 1440.736 kb on - strand, within AO356_06510 at 1440.736 kb on - strand, within AO356_06510 at 1440.736 kb on - strand, within AO356_06510 at 1440.736 kb on - strand, within AO356_06510 at 1440.859 kb on + strand, within AO356_06510 at 1440.912 kb on + strand at 1440.912 kb on + strand at 1440.912 kb on + strand at 1440.913 kb on - strand at 1440.913 kb on - strand at 1440.913 kb on - strand at 1440.913 kb on - strand at 1441.053 kb on + strand at 1441.069 kb on + strand at 1441.069 kb on + strand at 1441.095 kb on + strand at 1441.096 kb on - strand at 1441.096 kb on - strand at 1441.121 kb on + strand at 1441.196 kb on + strand at 1441.196 kb on + strand at 1441.197 kb on - strand at 1441.197 kb on - strand at 1441.197 kb on - strand at 1441.197 kb on - strand at 1441.197 kb on - strand at 1441.197 kb on - strand at 1441.197 kb on - strand at 1441.197 kb on - strand at 1441.197 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.0032 mg/ml remove 1,438,408 + AO356_06495 0.62 -0.4 1,438,408 + AO356_06495 0.62 +1.1 1,438,408 + AO356_06495 0.62 +0.9 1,438,409 - AO356_06495 0.62 -0.2 1,438,409 - AO356_06495 0.62 -1.9 1,438,688 + -0.5 1,438,864 + -0.4 1,438,887 - -0.8 1,438,887 - -1.0 1,439,042 + AO356_06500 0.38 -0.9 1,439,042 + AO356_06500 0.38 -0.6 1,439,042 + AO356_06500 0.38 +0.2 1,439,042 + AO356_06500 0.38 +0.4 1,439,042 + AO356_06500 0.38 -0.2 1,439,042 + AO356_06500 0.38 +0.2 1,439,042 + AO356_06500 0.38 -0.1 1,439,042 + AO356_06500 0.38 -1.5 1,439,042 + AO356_06500 0.38 -0.0 1,439,043 - AO356_06500 0.39 +0.8 1,439,043 - AO356_06500 0.39 +0.4 1,439,043 - AO356_06500 0.39 -1.0 1,439,043 - AO356_06500 0.39 -0.5 1,439,043 - AO356_06500 0.39 +0.6 1,439,043 - AO356_06500 0.39 -0.1 1,439,043 - AO356_06500 0.39 -1.3 1,439,043 - AO356_06500 0.39 +0.5 1,439,043 - AO356_06500 0.39 +1.7 1,439,043 - AO356_06500 0.39 +0.8 1,439,043 - AO356_06500 0.39 +0.2 1,439,179 + AO356_06500 0.75 +1.4 1,439,179 + AO356_06500 0.75 +0.3 1,439,179 + AO356_06500 0.75 -0.5 1,439,179 + AO356_06500 0.75 -0.2 1,439,180 - AO356_06500 0.75 +0.4 1,439,180 - AO356_06500 0.75 +1.2 1,439,180 - AO356_06500 0.75 -0.3 1,439,180 - AO356_06500 0.75 -0.3 1,439,180 - AO356_06500 0.75 +0.6 1,439,187 + AO356_06500 0.77 +0.3 1,439,187 + AO356_06500 0.77 +0.6 1,439,187 + AO356_06500 0.77 -0.8 1,439,187 + AO356_06500 0.77 -1.1 1,439,188 - AO356_06500 0.77 +1.0 1,439,188 - AO356_06500 0.77 -0.9 1,439,188 - AO356_06500 0.77 -0.7 1,439,188 - AO356_06500 0.77 -0.2 1,439,188 - AO356_06500 0.77 -0.2 1,439,188 - AO356_06500 0.77 +0.3 1,439,188 - AO356_06500 0.77 -0.3 1,439,191 + AO356_06500 0.78 -0.6 1,439,191 + AO356_06500 0.78 +0.3 1,439,191 + AO356_06500 0.78 -1.4 1,439,192 - AO356_06500 0.78 -1.3 1,439,192 - AO356_06500 0.78 -1.5 1,439,434 + AO356_06505 0.12 +1.3 1,439,435 - AO356_06505 0.12 +0.4 1,439,435 - AO356_06505 0.12 -0.4 1,439,435 - AO356_06505 0.12 -1.5 1,439,435 - AO356_06505 0.12 +1.1 1,439,435 - AO356_06505 0.12 +0.1 1,439,750 - AO356_06505 0.47 -0.1 1,439,761 + AO356_06505 0.48 -0.3 1,439,761 + AO356_06505 0.48 -0.3 1,439,761 + AO356_06505 0.48 -0.2 1,439,762 - AO356_06505 0.48 -0.2 1,439,762 - AO356_06505 0.48 +0.1 1,439,762 - AO356_06505 0.48 +0.4 1,439,762 - AO356_06505 0.48 -1.5 1,439,762 - AO356_06505 0.48 -0.1 1,439,762 - AO356_06505 0.48 -0.9 1,439,762 - AO356_06505 0.48 -1.5 1,439,762 - AO356_06505 0.48 +1.7 1,439,762 - AO356_06505 0.48 -0.7 1,439,830 + AO356_06505 0.56 +0.4 1,439,830 + AO356_06505 0.56 -0.6 1,439,905 + AO356_06505 0.64 -1.5 1,439,905 + AO356_06505 0.64 -2.2 1,439,905 + AO356_06505 0.64 -0.9 1,439,906 - AO356_06505 0.64 -0.3 1,439,906 - AO356_06505 0.64 -1.7 1,439,906 - AO356_06505 0.64 +1.7 1,440,271 + -0.4 1,440,380 - -0.2 1,440,472 + AO356_06510 0.23 -1.9 1,440,489 + AO356_06510 0.25 -0.6 1,440,489 + AO356_06510 0.25 +1.3 1,440,489 + AO356_06510 0.25 +1.3 1,440,489 + AO356_06510 0.25 +0.6 1,440,490 - AO356_06510 0.25 +0.4 1,440,490 - AO356_06510 0.25 -0.5 1,440,490 - AO356_06510 0.25 -0.2 1,440,570 - AO356_06510 0.38 +0.5 1,440,570 - AO356_06510 0.38 -1.5 1,440,735 + AO356_06510 0.64 +0.7 1,440,735 + AO356_06510 0.64 +0.7 1,440,735 + AO356_06510 0.64 -0.2 1,440,736 - AO356_06510 0.64 +1.7 1,440,736 - AO356_06510 0.64 +0.9 1,440,736 - AO356_06510 0.64 +0.7 1,440,736 - AO356_06510 0.64 -0.3 1,440,859 + AO356_06510 0.84 +0.3 1,440,912 + +1.1 1,440,912 + +0.5 1,440,912 + -3.1 1,440,913 - -0.5 1,440,913 - -0.2 1,440,913 - +1.8 1,440,913 - -2.9 1,441,053 + -0.7 1,441,069 + -1.2 1,441,069 + +0.8 1,441,095 + +0.8 1,441,096 - -0.5 1,441,096 - -0.7 1,441,121 + +1.3 1,441,196 + -0.5 1,441,196 + +0.0 1,441,197 - +0.1 1,441,197 - -0.9 1,441,197 - -0.5 1,441,197 - -0.7 1,441,197 - -0.8 1,441,197 - +0.6 1,441,197 - +0.3 1,441,197 - +0.3 1,441,197 - -0.2
Or see this region's nucleotide sequence