Experiment: Cisplatin 0.0032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_06480 and AO356_06485 are separated by 185 nucleotides
AO356_06480: AO356_06480 - hypothetical protein, at 1,435,778 to 1,436,335
_06480
AO356_06485: AO356_06485 - hypothetical protein, at 1,436,521 to 1,436,832
_06485
Position (kb)
1436
1437 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1435.615 kb on + strand at 1435.615 kb on + strand at 1435.615 kb on + strand at 1435.616 kb on - strand at 1435.616 kb on - strand at 1435.616 kb on - strand at 1435.676 kb on - strand at 1435.717 kb on + strand at 1435.717 kb on + strand at 1435.717 kb on + strand at 1435.717 kb on + strand at 1435.718 kb on - strand at 1435.718 kb on - strand at 1435.718 kb on - strand at 1435.718 kb on - strand at 1435.718 kb on - strand at 1435.748 kb on + strand at 1435.749 kb on - strand at 1435.749 kb on - strand at 1435.890 kb on + strand, within AO356_06480 at 1435.891 kb on - strand, within AO356_06480 at 1435.891 kb on - strand, within AO356_06480 at 1435.975 kb on + strand, within AO356_06480 at 1435.976 kb on - strand, within AO356_06480 at 1436.003 kb on + strand, within AO356_06480 at 1436.003 kb on + strand, within AO356_06480 at 1436.003 kb on + strand, within AO356_06480 at 1436.003 kb on + strand, within AO356_06480 at 1436.003 kb on + strand, within AO356_06480 at 1436.003 kb on + strand, within AO356_06480 at 1436.004 kb on - strand, within AO356_06480 at 1436.004 kb on - strand, within AO356_06480 at 1436.004 kb on - strand, within AO356_06480 at 1436.004 kb on - strand, within AO356_06480 at 1436.007 kb on + strand, within AO356_06480 at 1436.007 kb on + strand, within AO356_06480 at 1436.007 kb on + strand, within AO356_06480 at 1436.081 kb on + strand, within AO356_06480 at 1436.083 kb on + strand, within AO356_06480 at 1436.083 kb on + strand, within AO356_06480 at 1436.083 kb on + strand, within AO356_06480 at 1436.084 kb on - strand, within AO356_06480 at 1436.084 kb on - strand, within AO356_06480 at 1436.084 kb on - strand, within AO356_06480 at 1436.084 kb on - strand, within AO356_06480 at 1436.094 kb on + strand, within AO356_06480 at 1436.094 kb on + strand, within AO356_06480 at 1436.094 kb on + strand, within AO356_06480 at 1436.094 kb on + strand, within AO356_06480 at 1436.094 kb on + strand, within AO356_06480 at 1436.095 kb on - strand, within AO356_06480 at 1436.095 kb on - strand, within AO356_06480 at 1436.095 kb on - strand, within AO356_06480 at 1436.095 kb on - strand, within AO356_06480 at 1436.095 kb on - strand, within AO356_06480 at 1436.095 kb on - strand, within AO356_06480 at 1436.095 kb on - strand, within AO356_06480 at 1436.095 kb on - strand, within AO356_06480 at 1436.106 kb on + strand, within AO356_06480 at 1436.137 kb on + strand, within AO356_06480 at 1436.145 kb on + strand, within AO356_06480 at 1436.151 kb on + strand, within AO356_06480 at 1436.157 kb on + strand, within AO356_06480 at 1436.158 kb on - strand, within AO356_06480 at 1436.186 kb on + strand, within AO356_06480 at 1436.186 kb on + strand, within AO356_06480 at 1436.187 kb on - strand, within AO356_06480 at 1436.187 kb on - strand, within AO356_06480 at 1436.187 kb on - strand, within AO356_06480 at 1436.251 kb on + strand, within AO356_06480 at 1436.251 kb on + strand, within AO356_06480 at 1436.251 kb on + strand, within AO356_06480 at 1436.251 kb on + strand, within AO356_06480 at 1436.252 kb on - strand, within AO356_06480 at 1436.252 kb on - strand, within AO356_06480 at 1436.252 kb on - strand, within AO356_06480 at 1436.252 kb on - strand, within AO356_06480 at 1436.252 kb on - strand, within AO356_06480 at 1436.353 kb on + strand at 1436.365 kb on + strand at 1436.365 kb on + strand at 1436.365 kb on + strand at 1436.365 kb on + strand at 1436.365 kb on + strand at 1436.365 kb on + strand at 1436.365 kb on + strand at 1436.365 kb on + strand at 1436.365 kb on + strand at 1436.365 kb on + strand at 1436.366 kb on - strand at 1436.366 kb on - strand at 1436.366 kb on - strand at 1436.366 kb on - strand at 1436.366 kb on - strand at 1436.366 kb on - strand at 1436.367 kb on + strand at 1436.367 kb on + strand at 1436.367 kb on + strand at 1436.367 kb on + strand at 1436.367 kb on + strand at 1436.367 kb on + strand at 1436.367 kb on + strand at 1436.368 kb on - strand at 1436.368 kb on - strand at 1436.368 kb on - strand at 1436.368 kb on - strand at 1436.397 kb on + strand at 1436.397 kb on + strand at 1436.398 kb on - strand at 1436.398 kb on - strand at 1436.398 kb on - strand at 1436.398 kb on - strand at 1436.398 kb on - strand at 1436.398 kb on - strand at 1436.451 kb on + strand at 1436.451 kb on + strand at 1436.451 kb on + strand at 1436.452 kb on - strand at 1436.514 kb on + strand at 1436.514 kb on + strand at 1436.514 kb on + strand at 1436.515 kb on - strand at 1436.562 kb on - strand, within AO356_06485 at 1436.620 kb on + strand, within AO356_06485 at 1436.620 kb on + strand, within AO356_06485 at 1436.676 kb on + strand, within AO356_06485 at 1436.676 kb on + strand, within AO356_06485 at 1436.676 kb on + strand, within AO356_06485 at 1436.676 kb on + strand, within AO356_06485 at 1436.676 kb on + strand, within AO356_06485 at 1436.677 kb on - strand, within AO356_06485 at 1436.734 kb on + strand, within AO356_06485 at 1436.734 kb on + strand, within AO356_06485 at 1436.734 kb on + strand, within AO356_06485 at 1436.735 kb on - strand, within AO356_06485 at 1436.735 kb on - strand, within AO356_06485 at 1436.735 kb on - strand, within AO356_06485 at 1436.860 kb on - strand at 1436.860 kb on - strand at 1436.945 kb on - strand at 1437.177 kb on + strand at 1437.177 kb on + strand at 1437.412 kb on - strand at 1437.581 kb on - strand at 1437.581 kb on - strand at 1437.761 kb on + strand at 1437.761 kb on + strand at 1437.762 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.0032 mg/ml remove 1,435,615 + +0.2 1,435,615 + -0.0 1,435,615 + +1.1 1,435,616 - -0.6 1,435,616 - -1.1 1,435,616 - -0.1 1,435,676 - +0.1 1,435,717 + +0.5 1,435,717 + +0.7 1,435,717 + +0.0 1,435,717 + +0.1 1,435,718 - -0.8 1,435,718 - +0.3 1,435,718 - +0.5 1,435,718 - +0.1 1,435,718 - +0.4 1,435,748 + +0.1 1,435,749 - +0.5 1,435,749 - -1.8 1,435,890 + AO356_06480 0.20 +0.9 1,435,891 - AO356_06480 0.20 -0.2 1,435,891 - AO356_06480 0.20 -0.6 1,435,975 + AO356_06480 0.35 +0.7 1,435,976 - AO356_06480 0.35 +1.8 1,436,003 + AO356_06480 0.40 -0.3 1,436,003 + AO356_06480 0.40 +2.4 1,436,003 + AO356_06480 0.40 +0.1 1,436,003 + AO356_06480 0.40 -0.3 1,436,003 + AO356_06480 0.40 +0.1 1,436,003 + AO356_06480 0.40 -0.1 1,436,004 - AO356_06480 0.41 +1.1 1,436,004 - AO356_06480 0.41 +0.8 1,436,004 - AO356_06480 0.41 +0.5 1,436,004 - AO356_06480 0.41 +0.0 1,436,007 + AO356_06480 0.41 -0.5 1,436,007 + AO356_06480 0.41 +1.2 1,436,007 + AO356_06480 0.41 +0.8 1,436,081 + AO356_06480 0.54 -1.5 1,436,083 + AO356_06480 0.55 -0.7 1,436,083 + AO356_06480 0.55 +0.2 1,436,083 + AO356_06480 0.55 -0.1 1,436,084 - AO356_06480 0.55 -0.6 1,436,084 - AO356_06480 0.55 +1.4 1,436,084 - AO356_06480 0.55 -0.3 1,436,084 - AO356_06480 0.55 -0.3 1,436,094 + AO356_06480 0.57 +1.4 1,436,094 + AO356_06480 0.57 -0.4 1,436,094 + AO356_06480 0.57 -0.6 1,436,094 + AO356_06480 0.57 +1.3 1,436,094 + AO356_06480 0.57 +0.4 1,436,095 - AO356_06480 0.57 +0.8 1,436,095 - AO356_06480 0.57 +1.5 1,436,095 - AO356_06480 0.57 -1.1 1,436,095 - AO356_06480 0.57 +1.4 1,436,095 - AO356_06480 0.57 -1.1 1,436,095 - AO356_06480 0.57 +0.1 1,436,095 - AO356_06480 0.57 +3.3 1,436,095 - AO356_06480 0.57 +0.5 1,436,106 + AO356_06480 0.59 +0.3 1,436,137 + AO356_06480 0.64 -0.2 1,436,145 + AO356_06480 0.66 +0.1 1,436,151 + AO356_06480 0.67 -0.6 1,436,157 + AO356_06480 0.68 -1.1 1,436,158 - AO356_06480 0.68 +0.3 1,436,186 + AO356_06480 0.73 -1.1 1,436,186 + AO356_06480 0.73 +0.1 1,436,187 - AO356_06480 0.73 +0.3 1,436,187 - AO356_06480 0.73 +0.9 1,436,187 - AO356_06480 0.73 +1.0 1,436,251 + AO356_06480 0.85 +0.4 1,436,251 + AO356_06480 0.85 -1.7 1,436,251 + AO356_06480 0.85 -0.8 1,436,251 + AO356_06480 0.85 -0.0 1,436,252 - AO356_06480 0.85 -0.5 1,436,252 - AO356_06480 0.85 -1.4 1,436,252 - AO356_06480 0.85 +0.1 1,436,252 - AO356_06480 0.85 -0.4 1,436,252 - AO356_06480 0.85 -0.9 1,436,353 + -0.0 1,436,365 + +0.1 1,436,365 + +0.9 1,436,365 + +0.3 1,436,365 + +0.4 1,436,365 + +0.3 1,436,365 + +0.1 1,436,365 + -1.0 1,436,365 + -0.2 1,436,365 + -1.7 1,436,365 + +0.4 1,436,366 - +0.3 1,436,366 - -0.7 1,436,366 - -0.1 1,436,366 - +1.1 1,436,366 - +1.7 1,436,366 - +1.2 1,436,367 + -3.1 1,436,367 + -0.7 1,436,367 + -0.7 1,436,367 + +0.1 1,436,367 + -0.9 1,436,367 + +0.4 1,436,367 + -1.2 1,436,368 - -0.3 1,436,368 - -0.9 1,436,368 - -0.2 1,436,368 - -0.1 1,436,397 + +0.2 1,436,397 + +0.8 1,436,398 - +0.5 1,436,398 - -1.5 1,436,398 - +0.8 1,436,398 - +0.6 1,436,398 - +1.4 1,436,398 - -0.4 1,436,451 + -0.0 1,436,451 + -0.4 1,436,451 + -0.4 1,436,452 - -1.5 1,436,514 + +0.1 1,436,514 + +0.1 1,436,514 + +0.3 1,436,515 - +0.5 1,436,562 - AO356_06485 0.13 -0.1 1,436,620 + AO356_06485 0.32 -2.1 1,436,620 + AO356_06485 0.32 +1.0 1,436,676 + AO356_06485 0.50 -0.5 1,436,676 + AO356_06485 0.50 -0.6 1,436,676 + AO356_06485 0.50 +0.1 1,436,676 + AO356_06485 0.50 -0.8 1,436,676 + AO356_06485 0.50 -0.2 1,436,677 - AO356_06485 0.50 +1.6 1,436,734 + AO356_06485 0.68 -1.2 1,436,734 + AO356_06485 0.68 -2.1 1,436,734 + AO356_06485 0.68 -0.4 1,436,735 - AO356_06485 0.69 -0.3 1,436,735 - AO356_06485 0.69 -0.2 1,436,735 - AO356_06485 0.69 -1.3 1,436,860 - +0.4 1,436,860 - +0.7 1,436,945 - +0.9 1,437,177 + -0.1 1,437,177 + +0.7 1,437,412 - -0.4 1,437,581 - -0.6 1,437,581 - +1.3 1,437,761 + -0.2 1,437,761 + +0.1 1,437,762 - +0.1
Or see this region's nucleotide sequence