Experiment: Cisplatin 0.0032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_05845 and AO356_05850 are separated by 3 nucleotides AO356_05850 and AO356_05855 are separated by 36 nucleotides AO356_05855 and AO356_05860 are separated by 50 nucleotides
AO356_05845: AO356_05845 - baseplate assembly protein, at 1,295,772 to 1,296,383
_05845
AO356_05850: AO356_05850 - hypothetical protein, at 1,296,387 to 1,296,899
_05850
AO356_05855: AO356_05855 - pyocin R2, holin, at 1,296,936 to 1,297,286
_05855
AO356_05860: AO356_05860 - hypothetical protein, at 1,297,337 to 1,297,981
_05860
Position (kb)
1296
1297
1298 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1296.127 kb on - strand, within AO356_05845 at 1296.406 kb on + strand at 1296.406 kb on + strand at 1296.406 kb on + strand at 1296.407 kb on - strand at 1296.407 kb on - strand at 1296.407 kb on - strand at 1296.407 kb on - strand at 1296.497 kb on - strand, within AO356_05850 at 1296.533 kb on - strand, within AO356_05850 at 1296.832 kb on + strand, within AO356_05850 at 1296.832 kb on + strand, within AO356_05850 at 1296.833 kb on - strand, within AO356_05850 at 1296.833 kb on - strand, within AO356_05850 at 1296.916 kb on + strand at 1296.916 kb on + strand at 1296.978 kb on + strand, within AO356_05855 at 1297.009 kb on + strand, within AO356_05855 at 1297.009 kb on + strand, within AO356_05855 at 1297.093 kb on + strand, within AO356_05855 at 1297.093 kb on + strand, within AO356_05855 at 1297.093 kb on + strand, within AO356_05855 at 1297.093 kb on + strand, within AO356_05855 at 1297.094 kb on - strand, within AO356_05855 at 1297.094 kb on - strand, within AO356_05855 at 1297.305 kb on + strand at 1297.306 kb on - strand at 1297.319 kb on + strand at 1297.407 kb on + strand, within AO356_05860 at 1297.407 kb on + strand, within AO356_05860 at 1297.426 kb on + strand, within AO356_05860 at 1297.447 kb on + strand, within AO356_05860 at 1297.447 kb on + strand, within AO356_05860 at 1297.447 kb on + strand, within AO356_05860 at 1297.447 kb on + strand, within AO356_05860 at 1297.448 kb on - strand, within AO356_05860 at 1297.448 kb on - strand, within AO356_05860 at 1297.448 kb on - strand, within AO356_05860 at 1297.454 kb on - strand, within AO356_05860 at 1297.454 kb on - strand, within AO356_05860 at 1297.540 kb on + strand, within AO356_05860 at 1297.540 kb on + strand, within AO356_05860 at 1297.541 kb on - strand, within AO356_05860 at 1297.541 kb on - strand, within AO356_05860 at 1297.565 kb on + strand, within AO356_05860 at 1297.566 kb on - strand, within AO356_05860 at 1297.566 kb on - strand, within AO356_05860 at 1297.566 kb on - strand, within AO356_05860 at 1297.638 kb on - strand, within AO356_05860 at 1297.792 kb on - strand, within AO356_05860 at 1297.792 kb on - strand, within AO356_05860 at 1297.792 kb on - strand, within AO356_05860 at 1297.792 kb on - strand, within AO356_05860 at 1297.872 kb on + strand, within AO356_05860 at 1297.872 kb on + strand, within AO356_05860 at 1297.872 kb on + strand, within AO356_05860 at 1297.872 kb on + strand, within AO356_05860 at 1297.872 kb on + strand, within AO356_05860 at 1297.873 kb on - strand, within AO356_05860 at 1297.873 kb on - strand, within AO356_05860 at 1297.873 kb on - strand, within AO356_05860 at 1297.873 kb on - strand, within AO356_05860 at 1297.929 kb on - strand at 1297.973 kb on + strand at 1297.988 kb on + strand at 1298.011 kb on - strand at 1298.026 kb on + strand at 1298.026 kb on + strand at 1298.026 kb on + strand at 1298.026 kb on + strand at 1298.273 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.0032 mg/ml remove 1,296,127 - AO356_05845 0.58 +0.2 1,296,406 + +1.6 1,296,406 + +0.2 1,296,406 + +0.8 1,296,407 - -0.1 1,296,407 - +0.5 1,296,407 - +0.7 1,296,407 - -1.9 1,296,497 - AO356_05850 0.21 -0.5 1,296,533 - AO356_05850 0.28 -0.2 1,296,832 + AO356_05850 0.87 +0.8 1,296,832 + AO356_05850 0.87 -0.4 1,296,833 - AO356_05850 0.87 +0.1 1,296,833 - AO356_05850 0.87 -1.2 1,296,916 + -0.5 1,296,916 + -0.5 1,296,978 + AO356_05855 0.12 +0.2 1,297,009 + AO356_05855 0.21 +0.8 1,297,009 + AO356_05855 0.21 -0.2 1,297,093 + AO356_05855 0.45 -2.8 1,297,093 + AO356_05855 0.45 -0.5 1,297,093 + AO356_05855 0.45 +0.6 1,297,093 + AO356_05855 0.45 +0.6 1,297,094 - AO356_05855 0.45 +1.2 1,297,094 - AO356_05855 0.45 +1.2 1,297,305 + -0.4 1,297,306 - +2.5 1,297,319 + +1.2 1,297,407 + AO356_05860 0.11 +1.6 1,297,407 + AO356_05860 0.11 +0.3 1,297,426 + AO356_05860 0.14 +0.1 1,297,447 + AO356_05860 0.17 +1.9 1,297,447 + AO356_05860 0.17 -0.3 1,297,447 + AO356_05860 0.17 -1.4 1,297,447 + AO356_05860 0.17 -0.7 1,297,448 - AO356_05860 0.17 +0.2 1,297,448 - AO356_05860 0.17 -1.5 1,297,448 - AO356_05860 0.17 +0.5 1,297,454 - AO356_05860 0.18 -0.4 1,297,454 - AO356_05860 0.18 +0.3 1,297,540 + AO356_05860 0.31 +1.0 1,297,540 + AO356_05860 0.31 +3.4 1,297,541 - AO356_05860 0.32 +0.2 1,297,541 - AO356_05860 0.32 +0.1 1,297,565 + AO356_05860 0.35 +0.6 1,297,566 - AO356_05860 0.36 +0.3 1,297,566 - AO356_05860 0.36 -0.1 1,297,566 - AO356_05860 0.36 +0.4 1,297,638 - AO356_05860 0.47 +0.7 1,297,792 - AO356_05860 0.71 -0.4 1,297,792 - AO356_05860 0.71 -0.6 1,297,792 - AO356_05860 0.71 +0.4 1,297,792 - AO356_05860 0.71 -0.0 1,297,872 + AO356_05860 0.83 +0.2 1,297,872 + AO356_05860 0.83 +1.1 1,297,872 + AO356_05860 0.83 +0.3 1,297,872 + AO356_05860 0.83 +0.6 1,297,872 + AO356_05860 0.83 +0.8 1,297,873 - AO356_05860 0.83 +0.9 1,297,873 - AO356_05860 0.83 -0.7 1,297,873 - AO356_05860 0.83 +0.3 1,297,873 - AO356_05860 0.83 +2.1 1,297,929 - +0.5 1,297,973 + +0.4 1,297,988 + +0.2 1,298,011 - +1.1 1,298,026 + +0.7 1,298,026 + -0.1 1,298,026 + +0.3 1,298,026 + +0.2 1,298,273 + +1.7
Or see this region's nucleotide sequence