Experiment: Cisplatin 0.0032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_00180 and AO356_00185 are separated by 89 nucleotides AO356_00185 and AO356_00190 are separated by 74 nucleotides
AO356_00180: AO356_00180 - conjugal transfer protein TraG, at 31,945 to 34,050
_00180
AO356_00185: AO356_00185 - hypothetical protein, at 34,140 to 34,871
_00185
AO356_00190: AO356_00190 - hypothetical protein, at 34,946 to 36,082
_00190
Position (kb)
34
35 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 33.148 kb on + strand, within AO356_00180 at 33.149 kb on - strand, within AO356_00180 at 33.149 kb on - strand, within AO356_00180 at 33.195 kb on + strand, within AO356_00180 at 33.195 kb on + strand, within AO356_00180 at 33.195 kb on + strand, within AO356_00180 at 33.195 kb on + strand, within AO356_00180 at 33.218 kb on + strand, within AO356_00180 at 33.232 kb on + strand, within AO356_00180 at 33.242 kb on + strand, within AO356_00180 at 33.242 kb on + strand, within AO356_00180 at 33.242 kb on + strand, within AO356_00180 at 33.243 kb on - strand, within AO356_00180 at 33.243 kb on - strand, within AO356_00180 at 33.302 kb on - strand, within AO356_00180 at 33.394 kb on + strand, within AO356_00180 at 33.551 kb on - strand, within AO356_00180 at 33.551 kb on - strand, within AO356_00180 at 33.551 kb on - strand, within AO356_00180 at 33.671 kb on + strand, within AO356_00180 at 33.671 kb on + strand, within AO356_00180 at 33.691 kb on - strand, within AO356_00180 at 33.701 kb on + strand, within AO356_00180 at 33.701 kb on + strand, within AO356_00180 at 33.702 kb on - strand, within AO356_00180 at 33.826 kb on - strand, within AO356_00180 at 33.826 kb on - strand, within AO356_00180 at 33.836 kb on + strand, within AO356_00180 at 33.891 kb on + strand at 33.891 kb on + strand at 33.892 kb on - strand at 33.924 kb on + strand at 33.925 kb on - strand at 33.925 kb on - strand at 33.925 kb on - strand at 33.948 kb on + strand at 33.948 kb on + strand at 33.971 kb on - strand at 34.048 kb on + strand at 34.048 kb on + strand at 34.049 kb on - strand at 34.051 kb on + strand at 34.052 kb on - strand at 34.052 kb on - strand at 34.080 kb on + strand at 34.080 kb on + strand at 34.081 kb on - strand at 34.081 kb on - strand at 34.081 kb on - strand at 34.560 kb on + strand, within AO356_00185 at 34.560 kb on + strand, within AO356_00185 at 34.561 kb on - strand, within AO356_00185 at 34.561 kb on - strand, within AO356_00185 at 34.565 kb on + strand, within AO356_00185 at 34.591 kb on + strand, within AO356_00185 at 34.591 kb on + strand, within AO356_00185 at 34.628 kb on + strand, within AO356_00185 at 34.629 kb on - strand, within AO356_00185 at 34.658 kb on - strand, within AO356_00185 at 34.707 kb on + strand, within AO356_00185 at 34.730 kb on - strand, within AO356_00185 at 34.758 kb on - strand, within AO356_00185 at 34.762 kb on - strand, within AO356_00185 at 34.762 kb on - strand, within AO356_00185 at 34.765 kb on + strand, within AO356_00185 at 34.863 kb on + strand at 34.870 kb on - strand at 34.943 kb on + strand at 34.944 kb on - strand at 34.944 kb on - strand at 34.947 kb on + strand at 34.947 kb on + strand at 34.948 kb on - strand at 35.196 kb on + strand, within AO356_00190 at 35.196 kb on + strand, within AO356_00190 at 35.196 kb on + strand, within AO356_00190 at 35.196 kb on + strand, within AO356_00190 at 35.316 kb on + strand, within AO356_00190 at 35.335 kb on - strand, within AO356_00190 at 35.335 kb on - strand, within AO356_00190 at 35.443 kb on + strand, within AO356_00190 at 35.454 kb on + strand, within AO356_00190 at 35.454 kb on + strand, within AO356_00190 at 35.487 kb on - strand, within AO356_00190 at 35.588 kb on + strand, within AO356_00190 at 35.656 kb on + strand, within AO356_00190 at 35.657 kb on - strand, within AO356_00190 at 35.657 kb on - strand, within AO356_00190 at 35.657 kb on - strand, within AO356_00190 at 35.663 kb on - strand, within AO356_00190 at 35.663 kb on - strand, within AO356_00190 at 35.708 kb on + strand, within AO356_00190 at 35.709 kb on - strand, within AO356_00190 at 35.709 kb on - strand, within AO356_00190 at 35.709 kb on - strand, within AO356_00190 at 35.796 kb on + strand, within AO356_00190 at 35.796 kb on + strand, within AO356_00190 at 35.796 kb on + strand, within AO356_00190 at 35.796 kb on + strand, within AO356_00190 at 35.796 kb on + strand, within AO356_00190 at 35.796 kb on + strand, within AO356_00190 at 35.797 kb on - strand, within AO356_00190 at 35.801 kb on + strand, within AO356_00190 at 35.802 kb on - strand, within AO356_00190 at 35.802 kb on - strand, within AO356_00190 at 35.803 kb on + strand, within AO356_00190 at 35.803 kb on + strand, within AO356_00190 at 35.848 kb on + strand, within AO356_00190 at 35.848 kb on + strand, within AO356_00190 at 35.849 kb on - strand, within AO356_00190
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.0032 mg/ml remove 33,148 + AO356_00180 0.57 +0.1 33,149 - AO356_00180 0.57 +0.6 33,149 - AO356_00180 0.57 -0.2 33,195 + AO356_00180 0.59 -1.6 33,195 + AO356_00180 0.59 -1.4 33,195 + AO356_00180 0.59 -0.2 33,195 + AO356_00180 0.59 -1.8 33,218 + AO356_00180 0.60 -0.6 33,232 + AO356_00180 0.61 +0.2 33,242 + AO356_00180 0.62 -0.9 33,242 + AO356_00180 0.62 -0.7 33,242 + AO356_00180 0.62 -0.6 33,243 - AO356_00180 0.62 -1.0 33,243 - AO356_00180 0.62 -0.1 33,302 - AO356_00180 0.64 +0.6 33,394 + AO356_00180 0.69 -0.9 33,551 - AO356_00180 0.76 -1.2 33,551 - AO356_00180 0.76 -0.2 33,551 - AO356_00180 0.76 -1.2 33,671 + AO356_00180 0.82 -0.7 33,671 + AO356_00180 0.82 -1.2 33,691 - AO356_00180 0.83 -0.2 33,701 + AO356_00180 0.83 -0.2 33,701 + AO356_00180 0.83 +0.4 33,702 - AO356_00180 0.83 -0.8 33,826 - AO356_00180 0.89 -0.4 33,826 - AO356_00180 0.89 -2.8 33,836 + AO356_00180 0.90 -0.2 33,891 + +0.3 33,891 + +1.0 33,892 - +1.7 33,924 + -1.5 33,925 - -1.5 33,925 - -0.7 33,925 - +0.3 33,948 + +0.6 33,948 + -0.2 33,971 - -0.1 34,048 + +0.8 34,048 + +0.1 34,049 - -0.2 34,051 + -0.6 34,052 - -0.7 34,052 - +0.8 34,080 + -0.3 34,080 + -1.2 34,081 - -0.4 34,081 - +0.0 34,081 - -0.7 34,560 + AO356_00185 0.57 +1.1 34,560 + AO356_00185 0.57 +0.7 34,561 - AO356_00185 0.58 +0.6 34,561 - AO356_00185 0.58 +0.4 34,565 + AO356_00185 0.58 +0.7 34,591 + AO356_00185 0.62 +1.0 34,591 + AO356_00185 0.62 -0.2 34,628 + AO356_00185 0.67 +0.6 34,629 - AO356_00185 0.67 +0.7 34,658 - AO356_00185 0.71 -0.8 34,707 + AO356_00185 0.77 +0.7 34,730 - AO356_00185 0.81 +0.0 34,758 - AO356_00185 0.84 +0.0 34,762 - AO356_00185 0.85 +0.3 34,762 - AO356_00185 0.85 +1.4 34,765 + AO356_00185 0.85 +2.3 34,863 + +0.2 34,870 - -0.6 34,943 + -0.4 34,944 - +0.0 34,944 - -0.1 34,947 + +0.2 34,947 + -0.4 34,948 - -0.1 35,196 + AO356_00190 0.22 -1.5 35,196 + AO356_00190 0.22 -0.2 35,196 + AO356_00190 0.22 -1.2 35,196 + AO356_00190 0.22 -0.6 35,316 + AO356_00190 0.33 +0.8 35,335 - AO356_00190 0.34 -1.9 35,335 - AO356_00190 0.34 +0.1 35,443 + AO356_00190 0.44 +1.1 35,454 + AO356_00190 0.45 -1.4 35,454 + AO356_00190 0.45 +1.5 35,487 - AO356_00190 0.48 +0.0 35,588 + AO356_00190 0.56 +1.4 35,656 + AO356_00190 0.62 +0.8 35,657 - AO356_00190 0.63 +1.1 35,657 - AO356_00190 0.63 -0.4 35,657 - AO356_00190 0.63 -1.2 35,663 - AO356_00190 0.63 -0.4 35,663 - AO356_00190 0.63 +0.4 35,708 + AO356_00190 0.67 +0.1 35,709 - AO356_00190 0.67 +0.1 35,709 - AO356_00190 0.67 -0.4 35,709 - AO356_00190 0.67 -0.2 35,796 + AO356_00190 0.75 -0.6 35,796 + AO356_00190 0.75 +0.4 35,796 + AO356_00190 0.75 -0.5 35,796 + AO356_00190 0.75 -0.4 35,796 + AO356_00190 0.75 -0.7 35,796 + AO356_00190 0.75 +1.0 35,797 - AO356_00190 0.75 +0.2 35,801 + AO356_00190 0.75 +0.7 35,802 - AO356_00190 0.75 -0.1 35,802 - AO356_00190 0.75 -0.7 35,803 + AO356_00190 0.75 -0.3 35,803 + AO356_00190 0.75 +0.7 35,848 + AO356_00190 0.79 +0.3 35,848 + AO356_00190 0.79 -0.1 35,849 - AO356_00190 0.79 -0.5
Or see this region's nucleotide sequence