Experiment: Beta-alanine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS00280 and ABZR87_RS00285 are separated by 271 nucleotides ABZR87_RS00285 and ABZR87_RS00290 are separated by 79 nucleotides ABZR87_RS00290 and ABZR87_RS00295 are separated by 66 nucleotides
ABZR87_RS00280: ABZR87_RS00280 - CDP-6-deoxy-delta-3,4-glucoseen reductase, at 57,075 to 58,124
_RS00280
ABZR87_RS00285: ABZR87_RS00285 - acetylornithine transaminase, at 58,396 to 59,583
_RS00285
ABZR87_RS00290: ABZR87_RS00290 - GNAT family N-acetyltransferase, at 59,663 to 60,139
_RS00290
ABZR87_RS00295: ABZR87_RS00295 - ABC transporter ATP-binding protein, at 60,206 to 60,922
_RS00295
Position (kb) 58
59
60 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 57.462 kb on - strand, within ABZR87_RS00280 at 57.462 kb on - strand, within ABZR87_RS00280 at 57.462 kb on - strand, within ABZR87_RS00280 at 57.462 kb on - strand, within ABZR87_RS00280 at 57.483 kb on + strand, within ABZR87_RS00280 at 57.483 kb on + strand, within ABZR87_RS00280 at 57.484 kb on - strand, within ABZR87_RS00280 at 57.522 kb on + strand, within ABZR87_RS00280 at 57.522 kb on + strand, within ABZR87_RS00280 at 57.522 kb on + strand, within ABZR87_RS00280 at 57.523 kb on - strand, within ABZR87_RS00280 at 57.523 kb on - strand, within ABZR87_RS00280 at 57.596 kb on + strand, within ABZR87_RS00280 at 57.603 kb on + strand, within ABZR87_RS00280 at 57.603 kb on + strand, within ABZR87_RS00280 at 57.604 kb on - strand, within ABZR87_RS00280 at 57.804 kb on + strand, within ABZR87_RS00280 at 57.834 kb on + strand, within ABZR87_RS00280 at 57.834 kb on + strand, within ABZR87_RS00280 at 57.834 kb on + strand, within ABZR87_RS00280 at 57.834 kb on + strand, within ABZR87_RS00280 at 57.834 kb on + strand, within ABZR87_RS00280 at 57.834 kb on + strand, within ABZR87_RS00280 at 57.834 kb on + strand, within ABZR87_RS00280 at 57.834 kb on + strand, within ABZR87_RS00280 at 57.834 kb on + strand, within ABZR87_RS00280 at 57.834 kb on + strand, within ABZR87_RS00280 at 57.834 kb on + strand, within ABZR87_RS00280 at 57.835 kb on - strand, within ABZR87_RS00280 at 57.835 kb on - strand, within ABZR87_RS00280 at 57.835 kb on - strand, within ABZR87_RS00280 at 57.835 kb on - strand, within ABZR87_RS00280 at 57.835 kb on - strand, within ABZR87_RS00280 at 57.835 kb on - strand, within ABZR87_RS00280 at 57.886 kb on - strand, within ABZR87_RS00280 at 57.886 kb on - strand, within ABZR87_RS00280 at 57.886 kb on - strand, within ABZR87_RS00280 at 57.970 kb on - strand, within ABZR87_RS00280 at 57.997 kb on - strand, within ABZR87_RS00280 at 58.184 kb on - strand at 58.184 kb on - strand at 58.184 kb on - strand at 58.196 kb on + strand at 58.197 kb on - strand at 58.197 kb on - strand at 58.274 kb on + strand at 58.412 kb on - strand at 58.432 kb on + strand at 58.432 kb on + strand at 58.432 kb on + strand at 58.432 kb on + strand at 58.432 kb on + strand at 58.432 kb on + strand at 58.433 kb on - strand at 58.433 kb on - strand at 58.433 kb on - strand at 58.433 kb on - strand at 58.433 kb on - strand at 58.756 kb on - strand, within ABZR87_RS00285 at 58.756 kb on - strand, within ABZR87_RS00285 at 58.756 kb on - strand, within ABZR87_RS00285 at 59.224 kb on + strand, within ABZR87_RS00285 at 59.224 kb on + strand, within ABZR87_RS00285 at 59.224 kb on + strand, within ABZR87_RS00285 at 59.320 kb on + strand, within ABZR87_RS00285 at 59.320 kb on + strand, within ABZR87_RS00285 at 59.596 kb on + strand at 59.596 kb on + strand at 59.596 kb on + strand at 59.597 kb on - strand at 59.597 kb on - strand at 59.597 kb on - strand at 59.597 kb on - strand at 59.597 kb on - strand at 59.597 kb on - strand at 59.736 kb on + strand, within ABZR87_RS00290 at 59.737 kb on + strand, within ABZR87_RS00290 at 59.737 kb on + strand, within ABZR87_RS00290 at 59.737 kb on + strand, within ABZR87_RS00290 at 59.737 kb on + strand, within ABZR87_RS00290 at 59.737 kb on + strand, within ABZR87_RS00290 at 59.737 kb on + strand, within ABZR87_RS00290 at 59.737 kb on + strand, within ABZR87_RS00290 at 59.738 kb on - strand, within ABZR87_RS00290 at 59.738 kb on - strand, within ABZR87_RS00290 at 59.738 kb on - strand, within ABZR87_RS00290 at 59.738 kb on - strand, within ABZR87_RS00290 at 59.738 kb on - strand, within ABZR87_RS00290 at 59.738 kb on - strand, within ABZR87_RS00290 at 59.741 kb on + strand, within ABZR87_RS00290 at 59.741 kb on + strand, within ABZR87_RS00290 at 59.741 kb on + strand, within ABZR87_RS00290 at 59.741 kb on + strand, within ABZR87_RS00290 at 59.742 kb on - strand, within ABZR87_RS00290 at 59.742 kb on - strand, within ABZR87_RS00290 at 59.742 kb on - strand, within ABZR87_RS00290 at 59.765 kb on + strand, within ABZR87_RS00290 at 59.765 kb on + strand, within ABZR87_RS00290 at 59.835 kb on - strand, within ABZR87_RS00290 at 59.913 kb on - strand, within ABZR87_RS00290 at 59.913 kb on - strand, within ABZR87_RS00290 at 60.017 kb on - strand, within ABZR87_RS00290 at 60.017 kb on - strand, within ABZR87_RS00290 at 60.050 kb on + strand, within ABZR87_RS00290 at 60.050 kb on + strand, within ABZR87_RS00290 at 60.051 kb on - strand, within ABZR87_RS00290 at 60.119 kb on + strand at 60.119 kb on + strand at 60.119 kb on + strand at 60.120 kb on - strand at 60.120 kb on - strand at 60.120 kb on - strand at 60.120 kb on - strand at 60.120 kb on - strand at 60.120 kb on - strand at 60.208 kb on - strand at 60.208 kb on - strand at 60.208 kb on - strand at 60.208 kb on - strand at 60.219 kb on + strand at 60.219 kb on + strand at 60.220 kb on - strand at 60.220 kb on - strand at 60.220 kb on - strand at 60.297 kb on + strand, within ABZR87_RS00295
Per-strain Table
Position Strand Gene LocusTag Fraction Beta-alanine (C) remove 57,462 - ABZR87_RS00280 0.37 -0.3 57,462 - ABZR87_RS00280 0.37 +0.5 57,462 - ABZR87_RS00280 0.37 -0.2 57,462 - ABZR87_RS00280 0.37 -0.2 57,483 + ABZR87_RS00280 0.39 +0.8 57,483 + ABZR87_RS00280 0.39 +1.1 57,484 - ABZR87_RS00280 0.39 +0.4 57,522 + ABZR87_RS00280 0.43 +0.6 57,522 + ABZR87_RS00280 0.43 +0.4 57,522 + ABZR87_RS00280 0.43 -0.4 57,523 - ABZR87_RS00280 0.43 -0.1 57,523 - ABZR87_RS00280 0.43 +0.2 57,596 + ABZR87_RS00280 0.50 -1.0 57,603 + ABZR87_RS00280 0.50 -1.2 57,603 + ABZR87_RS00280 0.50 -0.4 57,604 - ABZR87_RS00280 0.50 +0.1 57,804 + ABZR87_RS00280 0.69 -0.4 57,834 + ABZR87_RS00280 0.72 -0.2 57,834 + ABZR87_RS00280 0.72 +0.2 57,834 + ABZR87_RS00280 0.72 -0.1 57,834 + ABZR87_RS00280 0.72 -0.1 57,834 + ABZR87_RS00280 0.72 -0.0 57,834 + ABZR87_RS00280 0.72 -0.5 57,834 + ABZR87_RS00280 0.72 -0.5 57,834 + ABZR87_RS00280 0.72 -0.2 57,834 + ABZR87_RS00280 0.72 -0.7 57,834 + ABZR87_RS00280 0.72 -0.2 57,834 + ABZR87_RS00280 0.72 -0.8 57,835 - ABZR87_RS00280 0.72 +0.2 57,835 - ABZR87_RS00280 0.72 -1.3 57,835 - ABZR87_RS00280 0.72 -0.1 57,835 - ABZR87_RS00280 0.72 +0.3 57,835 - ABZR87_RS00280 0.72 -1.2 57,835 - ABZR87_RS00280 0.72 +1.0 57,886 - ABZR87_RS00280 0.77 +0.9 57,886 - ABZR87_RS00280 0.77 +0.2 57,886 - ABZR87_RS00280 0.77 -0.0 57,970 - ABZR87_RS00280 0.85 +0.8 57,997 - ABZR87_RS00280 0.88 +0.7 58,184 - -0.1 58,184 - -2.3 58,184 - +0.5 58,196 + +0.1 58,197 - +0.6 58,197 - +0.3 58,274 + -0.2 58,412 - -0.8 58,432 + -2.5 58,432 + +0.3 58,432 + -1.2 58,432 + -1.5 58,432 + -2.4 58,432 + -1.5 58,433 - +2.4 58,433 - -1.0 58,433 - +0.8 58,433 - -0.8 58,433 - -1.8 58,756 - ABZR87_RS00285 0.30 +2.4 58,756 - ABZR87_RS00285 0.30 +0.4 58,756 - ABZR87_RS00285 0.30 -0.3 59,224 + ABZR87_RS00285 0.70 -0.4 59,224 + ABZR87_RS00285 0.70 -0.9 59,224 + ABZR87_RS00285 0.70 -2.3 59,320 + ABZR87_RS00285 0.78 -0.6 59,320 + ABZR87_RS00285 0.78 -1.0 59,596 + +0.0 59,596 + -0.2 59,596 + -0.3 59,597 - +0.5 59,597 - +0.2 59,597 - +0.6 59,597 - +0.7 59,597 - +0.1 59,597 - -0.3 59,736 + ABZR87_RS00290 0.15 -0.3 59,737 + ABZR87_RS00290 0.16 -0.1 59,737 + ABZR87_RS00290 0.16 +0.0 59,737 + ABZR87_RS00290 0.16 +0.4 59,737 + ABZR87_RS00290 0.16 +0.9 59,737 + ABZR87_RS00290 0.16 +1.4 59,737 + ABZR87_RS00290 0.16 +2.4 59,737 + ABZR87_RS00290 0.16 +0.0 59,738 - ABZR87_RS00290 0.16 -0.5 59,738 - ABZR87_RS00290 0.16 +0.6 59,738 - ABZR87_RS00290 0.16 +0.5 59,738 - ABZR87_RS00290 0.16 +0.2 59,738 - ABZR87_RS00290 0.16 +0.5 59,738 - ABZR87_RS00290 0.16 +0.7 59,741 + ABZR87_RS00290 0.16 -0.2 59,741 + ABZR87_RS00290 0.16 -0.8 59,741 + ABZR87_RS00290 0.16 -0.5 59,741 + ABZR87_RS00290 0.16 -1.3 59,742 - ABZR87_RS00290 0.17 -0.1 59,742 - ABZR87_RS00290 0.17 -0.1 59,742 - ABZR87_RS00290 0.17 +0.5 59,765 + ABZR87_RS00290 0.21 +0.1 59,765 + ABZR87_RS00290 0.21 -0.4 59,835 - ABZR87_RS00290 0.36 +0.9 59,913 - ABZR87_RS00290 0.52 +0.4 59,913 - ABZR87_RS00290 0.52 +0.2 60,017 - ABZR87_RS00290 0.74 -0.1 60,017 - ABZR87_RS00290 0.74 -0.5 60,050 + ABZR87_RS00290 0.81 +0.3 60,050 + ABZR87_RS00290 0.81 -0.9 60,051 - ABZR87_RS00290 0.81 +0.6 60,119 + +0.3 60,119 + +0.0 60,119 + -0.0 60,120 - -0.8 60,120 - -0.1 60,120 - +0.3 60,120 - +1.1 60,120 - -0.3 60,120 - +0.3 60,208 - -0.7 60,208 - -0.9 60,208 - -0.8 60,208 - -1.4 60,219 + -4.2 60,219 + -3.0 60,220 - -3.8 60,220 - -1.0 60,220 - -3.3 60,297 + ABZR87_RS00295 0.13 -2.3
Or see this region's nucleotide sequence