Strain Fitness in Sinorhizobium meliloti 1021 around SMc04234
Experiment: Fusidic 0.0001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Fusidic 0.0001 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,060,469 | - | -0.2 | |||
2,060,469 | - | +1.1 | |||
2,060,511 | + | -0.6 | |||
2,060,527 | - | -0.3 | |||
2,060,527 | - | +0.5 | |||
2,060,527 | - | +0.4 | |||
2,060,533 | - | +0.7 | |||
2,060,593 | + | +0.0 | |||
2,060,594 | - | -0.3 | |||
2,060,594 | - | +0.5 | |||
2,060,594 | - | -1.0 | |||
2,060,791 | - | -1.2 | |||
2,060,812 | + | -0.1 | |||
2,060,893 | + | -0.1 | |||
2,060,894 | - | -0.7 | |||
2,060,909 | - | -1.3 | |||
2,061,016 | + | +0.6 | |||
2,061,016 | + | -0.3 | |||
2,061,683 | + | +1.0 | |||
2,061,683 | + | +0.7 | |||
2,061,683 | + | +0.1 | |||
2,061,784 | + | +1.7 | |||
2,061,784 | + | +0.7 | |||
2,061,785 | - | +0.4 | |||
2,061,785 | - | +1.5 | |||
2,061,794 | + | SMc04235 | 0.10 | +1.3 | |
2,061,874 | - | SMc04235 | 0.18 | +1.7 | |
2,061,887 | + | SMc04235 | 0.19 | +1.7 | |
2,061,887 | + | SMc04235 | 0.19 | +0.8 | |
2,061,936 | + | SMc04235 | 0.24 | +2.4 | |
2,061,936 | + | SMc04235 | 0.24 | +1.3 | |
2,061,936 | + | SMc04235 | 0.24 | +0.4 | |
2,061,937 | - | SMc04235 | 0.24 | +2.1 | |
2,062,007 | + | SMc04235 | 0.30 | +1.1 | |
2,062,360 | + | SMc04235 | 0.63 | +1.5 | |
2,062,360 | + | SMc04235 | 0.63 | +1.4 | |
2,062,361 | - | SMc04235 | 0.63 | +1.6 |
Or see this region's nucleotide sequence