Strain Fitness in Sinorhizobium meliloti 1021 around SMc03863
Experiment: Fusidic 0.0001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Fusidic 0.0001 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,526,283 | + | SMc03862 | 0.14 | -0.3 | |
3,526,283 | + | SMc03862 | 0.14 | +1.1 | |
3,526,284 | - | SMc03862 | 0.14 | +1.7 | |
3,526,284 | - | SMc03862 | 0.14 | -2.6 | |
3,526,285 | + | +1.5 | |||
3,526,285 | + | SMc03862 | 0.14 | -1.9 | |
3,526,493 | - | SMc03862 | 0.42 | +0.4 | |
3,526,760 | + | SMc03862 | 0.77 | -0.2 | |
3,526,761 | - | SMc03862 | 0.78 | -0.6 | |
3,526,763 | - | +1.5 | |||
3,526,763 | - | SMc03862 | 0.78 | +0.4 | |
3,526,992 | - | +0.2 | |||
3,526,992 | - | +0.3 | |||
3,527,568 | - | SMc03863 | 0.57 | -2.8 | |
3,527,605 | - | SMc03863 | 0.64 | -2.4 | |
3,527,875 | + | -0.1 | |||
3,528,278 | + | SMc03864 | 0.44 | -0.3 | |
3,528,278 | + | SMc03864 | 0.44 | -1.1 | |
3,528,279 | - | SMc03864 | 0.44 | -0.2 | |
3,528,279 | - | SMc03864 | 0.44 | -0.2 | |
3,528,280 | + | SMc03864 | 0.44 | -0.2 | |
3,528,281 | - | SMc03864 | 0.44 | -0.9 | |
3,528,398 | + | SMc03864 | 0.59 | +0.5 | |
3,528,399 | - | SMc03864 | 0.59 | -0.8 | |
3,528,410 | + | SMc03864 | 0.60 | -0.6 | |
3,528,539 | + | SMc03864 | 0.76 | -0.4 | |
3,528,539 | + | SMc03864 | 0.76 | +0.1 | |
3,528,540 | - | SMc03864 | 0.76 | -0.2 | |
3,528,745 | + | +0.3 |
Or see this region's nucleotide sequence