Strain Fitness in Sinorhizobium meliloti 1021 around SMc03059
Experiment: Fusidic 0.0001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Fusidic 0.0001 mg/ml |
---|---|---|---|---|---|
remove | |||||
753,972 | - | SMc03058 | 0.37 | +0.3 | |
753,983 | - | SMc03058 | 0.38 | -0.7 | |
754,060 | - | SMc03058 | 0.46 | +0.4 | |
754,230 | - | SMc03058 | 0.63 | +0.1 | |
754,242 | + | SMc03058 | 0.65 | +0.3 | |
754,243 | - | SMc03058 | 0.65 | -0.5 | |
754,243 | - | SMc03058 | 0.65 | -2.8 | |
754,624 | + | -0.7 | |||
754,625 | - | -1.5 | |||
754,625 | - | -0.3 | |||
754,816 | - | +0.1 | |||
754,833 | + | +0.2 | |||
754,833 | + | -0.2 | |||
754,871 | + | -0.0 | |||
754,871 | + | +1.4 | |||
755,824 | + | -0.4 | |||
755,824 | + | -0.2 | |||
755,825 | - | +0.5 | |||
755,825 | - | +0.1 | |||
755,825 | - | -0.1 | |||
755,857 | - | -0.1 | |||
755,870 | - | -1.1 | |||
755,870 | - | +0.1 | |||
756,251 | + | -0.5 | |||
756,251 | + | +0.5 | |||
756,251 | + | -0.1 | |||
756,251 | + | -0.4 | |||
756,251 | + | +0.6 | |||
756,251 | + | -0.1 | |||
756,264 | + | -0.4 | |||
756,477 | + | SMc03060 | 0.10 | -0.5 | |
756,494 | + | SMc03060 | 0.12 | -0.0 | |
756,495 | - | SMc03060 | 0.12 | +1.4 | |
756,688 | + | SMc03060 | 0.30 | -0.6 | |
756,689 | - | SMc03060 | 0.30 | +0.1 |
Or see this region's nucleotide sequence