Strain Fitness in Sinorhizobium meliloti 1021 around SMc02487
Experiment: Fusidic 0.0001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Fusidic 0.0001 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,307,651 | + | SMc02488 | 0.76 | -1.4 | |
3,308,112 | - | -1.7 | |||
3,309,598 | - | -0.1 | |||
3,309,598 | - | -0.5 | |||
3,309,622 | - | +0.3 | |||
3,309,765 | - | SMc02486 | 0.28 | +0.0 | |
3,309,765 | - | SMc02486 | 0.28 | -0.3 | |
3,309,835 | - | SMc02486 | 0.37 | -0.2 | |
3,309,844 | - | SMc02486 | 0.38 | -0.1 | |
3,309,844 | - | SMc02486 | 0.38 | +0.7 | |
3,310,207 | - | SMc02486 | 0.86 | -0.4 | |
3,310,207 | - | SMc02486 | 0.86 | -0.1 | |
3,310,207 | - | SMc02486 | 0.86 | -1.6 | |
3,310,354 | - | -0.4 | |||
3,310,354 | - | +1.3 | |||
3,310,354 | - | -0.7 | |||
3,310,482 | - | SMc02485 | 0.35 | -0.0 |
Or see this region's nucleotide sequence