Strain Fitness in Sinorhizobium meliloti 1021 around SMc01595
Experiment: Fusidic 0.0001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Fusidic 0.0001 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,524,929 | + | -0.8 | |||
2,524,930 | - | +0.8 | |||
2,524,930 | - | +0.1 | |||
2,524,930 | - | -0.3 | |||
2,524,930 | - | +2.8 | |||
2,527,011 | + | SMc01595 | 0.80 | +0.8 | |
2,527,011 | + | SMc01595 | 0.80 | +0.2 | |
2,527,012 | - | SMc01595 | 0.80 | -4.1 | |
2,527,012 | - | SMc01595 | 0.80 | -1.4 | |
2,527,018 | - | SMc01595 | 0.81 | -1.8 | |
2,527,285 | - | +0.8 | |||
2,527,471 | + | SMc04456 | 0.50 | +0.2 | |
2,527,471 | + | SMc04456 | 0.50 | +0.2 | |
2,527,472 | - | SMc04456 | 0.51 | -0.5 | |
2,527,621 | + | -0.2 | |||
2,527,680 | - | -0.1 | |||
2,527,680 | - | -0.2 | |||
2,527,961 | + | SMc02677 | 0.26 | +0.3 | |
2,527,961 | + | SMc02677 | 0.26 | +0.1 | |
2,527,961 | + | SMc02677 | 0.26 | -1.3 | |
2,527,962 | - | SMc02677 | 0.26 | -0.2 | |
2,528,017 | - | SMc02677 | 0.33 | -0.1 | |
2,528,017 | - | SMc02677 | 0.33 | +0.3 | |
2,528,198 | - | SMc02677 | 0.55 | -0.5 |
Or see this region's nucleotide sequence