Strain Fitness in Sinorhizobium meliloti 1021 around SMc01364
Experiment: Fusidic 0.0001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Fusidic 0.0001 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,416,086 | + | SMc01365 | 0.62 | -2.1 | |
1,416,086 | + | SMc01365 | 0.62 | -1.4 | |
1,416,190 | + | SMc01365 | 0.66 | -1.0 | |
1,416,191 | - | SMc01365 | 0.66 | -0.6 | |
1,416,474 | + | SMc01365 | 0.78 | -2.0 | |
1,416,475 | - | SMc01365 | 0.78 | -0.9 | |
1,416,664 | + | SMc01365 | 0.86 | -1.1 | |
1,416,664 | + | SMc01365 | 0.86 | -1.6 | |
1,416,774 | - | -0.8 | |||
1,417,265 | + | -4.1 | |||
1,417,266 | - | -2.2 | |||
1,417,266 | - | -1.1 | |||
1,417,294 | - | SMc01364 | 0.11 | -2.2 | |
1,417,294 | - | +0.2 | |||
1,419,781 | + | -1.4 | |||
1,419,781 | + | +0.5 | |||
1,419,782 | - | +0.4 | |||
1,419,782 | - | +1.3 | |||
1,419,785 | + | -2.3 | |||
1,419,785 | + | +0.7 | |||
1,419,785 | + | +1.4 | |||
1,419,785 | + | -0.5 | |||
1,419,785 | + | -0.1 | |||
1,419,786 | - | +0.6 | |||
1,419,786 | - | +0.2 | |||
1,419,786 | - | +0.2 | |||
1,419,786 | - | +0.9 | |||
1,419,787 | + | -1.6 | |||
1,419,788 | - | +1.5 | |||
1,419,912 | + | +1.2 | |||
1,419,912 | + | -0.5 | |||
1,419,971 | + | -0.8 | |||
1,419,971 | + | +0.5 | |||
1,419,971 | + | +0.1 | |||
1,419,972 | - | +1.0 | |||
1,419,972 | - | +0.8 | |||
1,419,998 | + | +0.3 | |||
1,419,999 | - | +0.4 | |||
1,419,999 | - | +0.6 | |||
1,419,999 | - | +0.2 | |||
1,420,294 | + | SMc01363 | 0.35 | +0.5 |
Or see this region's nucleotide sequence