Experiment: Fusidic 0.0001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc00966 and SMc00965 overlap by 17 nucleotides SMc00965 and SMc00964 are separated by 4 nucleotides SMc00964 and SMc00963 are separated by 31 nucleotides
SMc00966: SMc00966 - acetyl-COA acyltransferase, at 973,742 to 974,935
SMc00966
SMc00965: SMc00965 - hypothetical protein, at 974,919 to 976,415
SMc00965
SMc00964: SMc00964 - hypothetical protein, at 976,420 to 976,983
SMc00964
SMc00963: SMc00963 - hypothetical protein, at 977,015 to 977,620
SMc00963
Position (kb) 974
975
976
977 Strain fitness (log2 ratio) -1
0
1
2 at 974.592 kb on + strand, within SMc00966 at 974.592 kb on + strand, within SMc00966 at 974.593 kb on - strand, within SMc00966 at 974.593 kb on - strand, within SMc00966 at 974.593 kb on - strand, within SMc00966 at 974.753 kb on - strand, within SMc00966 at 975.025 kb on - strand at 975.043 kb on + strand at 975.214 kb on + strand, within SMc00965 at 975.272 kb on + strand, within SMc00965 at 975.272 kb on + strand, within SMc00965 at 975.538 kb on + strand, within SMc00965 at 975.620 kb on + strand, within SMc00965 at 975.621 kb on - strand, within SMc00965 at 975.621 kb on - strand, within SMc00965 at 975.802 kb on + strand, within SMc00965 at 975.803 kb on - strand, within SMc00965 at 976.122 kb on + strand, within SMc00965 at 976.983 kb on + strand at 976.983 kb on + strand at 976.983 kb on + strand at 976.983 kb on + strand at 976.984 kb on - strand at 976.984 kb on - strand at 976.985 kb on + strand at 976.985 kb on + strand at 976.985 kb on + strand at 976.986 kb on - strand at 976.986 kb on - strand at 976.986 kb on - strand at 976.986 kb on - strand at 976.992 kb on - strand at 976.992 kb on - strand at 976.992 kb on - strand at 977.001 kb on + strand at 977.002 kb on - strand at 977.017 kb on - strand at 977.158 kb on - strand, within SMc00963 at 977.265 kb on - strand, within SMc00963 at 977.402 kb on + strand, within SMc00963 at 977.403 kb on - strand, within SMc00963
Per-strain Table
Position Strand Gene LocusTag Fraction Fusidic 0.0001 mg/ml remove 974,592 + SMc00966 0.71 +0.2 974,592 + SMc00966 0.71 +0.1 974,593 - SMc00966 0.71 +0.2 974,593 - SMc00966 0.71 -0.6 974,593 - SMc00966 0.71 -0.2 974,753 - SMc00966 0.85 -0.6 975,025 - +0.7 975,043 + +0.6 975,214 + SMc00965 0.20 -0.1 975,272 + SMc00965 0.24 -0.1 975,272 + SMc00965 0.24 +0.3 975,538 + SMc00965 0.41 +0.2 975,620 + SMc00965 0.47 -0.7 975,621 - SMc00965 0.47 +0.4 975,621 - SMc00965 0.47 -0.1 975,802 + SMc00965 0.59 +1.0 975,803 - SMc00965 0.59 +0.7 976,122 + SMc00965 0.80 +0.4 976,983 + +0.1 976,983 + +0.5 976,983 + +0.1 976,983 + +0.0 976,984 - +0.0 976,984 - +0.1 976,985 + +1.0 976,985 + +0.2 976,985 + -0.1 976,986 - +1.9 976,986 - +0.4 976,986 - +0.3 976,986 - -0.6 976,992 - +0.7 976,992 - -0.3 976,992 - -0.5 977,001 + -0.0 977,002 - -0.1 977,017 - +0.6 977,158 - SMc00963 0.24 -0.7 977,265 - SMc00963 0.41 +0.1 977,402 + SMc00963 0.64 -0.1 977,403 - SMc00963 0.64 -0.8
Or see this region's nucleotide sequence