Strain Fitness in Sinorhizobium meliloti 1021 around SMc00576
Experiment: Fusidic 0.0001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Fusidic 0.0001 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,246,045 | + | -0.3 | |||
1,246,045 | + | -0.1 | |||
1,246,046 | - | -0.0 | |||
1,246,046 | - | -0.6 | |||
1,246,046 | - | -0.0 | |||
1,246,046 | - | -0.1 | |||
1,246,078 | - | -0.8 | |||
1,246,079 | + | -0.7 | |||
1,246,172 | + | -0.7 | |||
1,246,203 | - | -1.9 | |||
1,246,203 | - | -1.5 | |||
1,246,263 | + | -0.9 | |||
1,246,425 | + | SMc00576 | 0.15 | -1.3 | |
1,246,426 | - | SMc00576 | 0.15 | -0.9 | |
1,246,426 | - | SMc00576 | 0.15 | -2.3 | |
1,246,611 | + | SMc00576 | 0.36 | -0.9 | |
1,246,695 | - | SMc00576 | 0.45 | -1.1 | |
1,246,775 | + | SMc00576 | 0.55 | -0.5 | |
1,246,775 | + | SMc00576 | 0.55 | -0.5 | |
1,246,776 | - | SMc00576 | 0.55 | -0.7 | |
1,247,076 | + | -1.3 | |||
1,248,057 | - | -0.5 | |||
1,248,111 | - | +0.0 | |||
1,248,111 | - | +0.4 |
Or see this region's nucleotide sequence