Strain Fitness in Sinorhizobium meliloti 1021 around SMc00456
Experiment: Fusidic 0.0001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Fusidic 0.0001 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,091,930 | - | -0.2 | |||
1,092,432 | - | -0.4 | |||
1,092,432 | - | -0.8 | |||
1,092,432 | - | -1.4 | |||
1,092,432 | - | +0.5 | |||
1,092,432 | - | -1.3 | |||
1,092,525 | - | -0.2 | |||
1,092,525 | - | -0.7 | |||
1,092,617 | + | +0.1 | |||
1,092,618 | - | -0.4 | |||
1,092,618 | - | +0.6 | |||
1,092,666 | + | SMc00456 | 0.11 | +0.0 | |
1,092,667 | - | SMc00456 | 0.12 | -0.7 | |
1,092,803 | + | SMc00456 | 0.43 | -0.8 | |
1,092,886 | + | SMc00456 | 0.62 | -0.2 | |
1,092,886 | + | SMc00456 | 0.62 | -0.1 | |
1,092,901 | + | SMc00456 | 0.65 | -0.9 | |
1,092,901 | + | SMc00456 | 0.65 | -0.3 | |
1,092,901 | + | SMc00456 | 0.65 | -0.7 | |
1,092,902 | - | SMc00456 | 0.65 | -2.3 | |
1,092,902 | - | SMc00456 | 0.65 | -1.0 | |
1,092,902 | - | SMc00456 | 0.65 | -0.4 | |
1,092,905 | + | SMc00456 | 0.66 | -0.8 | |
1,092,905 | + | SMc00456 | 0.66 | -1.4 | |
1,092,906 | - | SMc00456 | 0.66 | -1.0 | |
1,093,096 | + | -0.9 | |||
1,093,097 | - | -0.6 |
Or see this region's nucleotide sequence