Experiment: Fusidic 0.0001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa2051 and SMa2053 overlap by 4 nucleotides SMa2053 and SMa2055 are separated by 74 nucleotides SMa2055 and SMa2057 are separated by 14 nucleotides SMa2057 and SMa2059 are separated by 209 nucleotides
SMa2051: SMa2051 - desaturase, at 1,159,791 to 1,160,825
SMa2051
SMa2053: SMa2053 - MocE-like protein, at 1,160,822 to 1,161,133
SMa2053
SMa2055: SMa2055 - hypothetical protein, at 1,161,208 to 1,161,459
SMa2055
SMa2057: SMa2057 - hypothetical protein, at 1,161,474 to 1,161,689
SMa2057
SMa2059: SMa2059 - hypothetical protein, at 1,161,899 to 1,162,480
SMa2059
Position (kb)
1160
1161
1162 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1159.867 kb on + strand at 1159.867 kb on + strand at 1160.031 kb on + strand, within SMa2051 at 1160.060 kb on - strand, within SMa2051 at 1160.060 kb on - strand, within SMa2051 at 1160.064 kb on + strand, within SMa2051 at 1160.065 kb on - strand, within SMa2051 at 1160.065 kb on - strand, within SMa2051 at 1160.088 kb on + strand, within SMa2051 at 1160.089 kb on - strand, within SMa2051 at 1160.089 kb on - strand, within SMa2051 at 1160.089 kb on - strand, within SMa2051 at 1160.121 kb on + strand, within SMa2051 at 1160.199 kb on - strand, within SMa2051 at 1160.256 kb on + strand, within SMa2051 at 1160.256 kb on + strand, within SMa2051 at 1160.257 kb on - strand, within SMa2051 at 1160.478 kb on + strand, within SMa2051 at 1160.497 kb on - strand, within SMa2051 at 1160.536 kb on - strand, within SMa2051 at 1160.631 kb on + strand, within SMa2051 at 1160.631 kb on + strand, within SMa2051 at 1160.631 kb on + strand, within SMa2051 at 1160.640 kb on + strand, within SMa2051 at 1160.655 kb on + strand, within SMa2051 at 1160.656 kb on - strand, within SMa2051 at 1160.670 kb on + strand, within SMa2051 at 1160.696 kb on + strand, within SMa2051 at 1160.900 kb on + strand, within SMa2053 at 1160.900 kb on + strand, within SMa2053 at 1160.901 kb on - strand, within SMa2053 at 1160.901 kb on - strand, within SMa2053 at 1161.131 kb on + strand at 1161.174 kb on - strand at 1161.452 kb on + strand at 1161.453 kb on - strand at 1161.453 kb on - strand at 1161.471 kb on - strand at 1161.471 kb on - strand at 1161.911 kb on + strand at 1162.030 kb on + strand, within SMa2059 at 1162.052 kb on + strand, within SMa2059 at 1162.052 kb on + strand, within SMa2059 at 1162.052 kb on + strand, within SMa2059 at 1162.053 kb on - strand, within SMa2059 at 1162.053 kb on - strand, within SMa2059 at 1162.053 kb on - strand, within SMa2059
Per-strain Table
Position Strand Gene LocusTag Fraction Fusidic 0.0001 mg/ml remove 1,159,867 + +1.0 1,159,867 + -0.5 1,160,031 + SMa2051 0.23 +0.1 1,160,060 - SMa2051 0.26 +0.4 1,160,060 - SMa2051 0.26 +0.2 1,160,064 + SMa2051 0.26 -0.5 1,160,065 - SMa2051 0.26 +0.4 1,160,065 - SMa2051 0.26 +0.2 1,160,088 + SMa2051 0.29 -0.6 1,160,089 - SMa2051 0.29 -0.9 1,160,089 - SMa2051 0.29 +0.7 1,160,089 - SMa2051 0.29 -0.4 1,160,121 + SMa2051 0.32 +0.3 1,160,199 - SMa2051 0.39 -0.1 1,160,256 + SMa2051 0.45 +0.5 1,160,256 + SMa2051 0.45 +0.1 1,160,257 - SMa2051 0.45 -0.4 1,160,478 + SMa2051 0.66 -1.4 1,160,497 - SMa2051 0.68 -0.6 1,160,536 - SMa2051 0.72 -0.1 1,160,631 + SMa2051 0.81 -0.5 1,160,631 + SMa2051 0.81 -0.4 1,160,631 + SMa2051 0.81 +0.4 1,160,640 + SMa2051 0.82 +0.0 1,160,655 + SMa2051 0.83 +0.2 1,160,656 - SMa2051 0.84 +0.0 1,160,670 + SMa2051 0.85 -0.5 1,160,696 + SMa2051 0.87 +0.3 1,160,900 + SMa2053 0.25 -2.9 1,160,900 + SMa2053 0.25 +0.2 1,160,901 - SMa2053 0.25 -0.9 1,160,901 - SMa2053 0.25 -1.5 1,161,131 + -0.5 1,161,174 - +0.5 1,161,452 + -0.4 1,161,453 - +0.2 1,161,453 - -0.1 1,161,471 - +0.5 1,161,471 - +0.9 1,161,911 + +0.7 1,162,030 + SMa2059 0.23 -0.5 1,162,052 + SMa2059 0.26 +0.3 1,162,052 + SMa2059 0.26 -0.8 1,162,052 + SMa2059 0.26 -0.5 1,162,053 - SMa2059 0.26 +1.4 1,162,053 - SMa2059 0.26 -1.6 1,162,053 - SMa2059 0.26 -0.1
Or see this region's nucleotide sequence