Strain Fitness in Sinorhizobium meliloti 1021 around SMa1639
Experiment: Fusidic 0.0001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Fusidic 0.0001 mg/ml |
---|---|---|---|---|---|
remove | |||||
913,578 | + | -0.3 | |||
913,579 | - | -0.8 | |||
913,641 | + | -0.1 | |||
913,642 | - | +0.4 | |||
913,687 | + | -0.3 | |||
913,688 | - | -0.9 | |||
913,724 | + | +0.2 | |||
913,966 | + | SMa1639 | 0.87 | +0.8 | |
913,967 | - | SMa1639 | 0.88 | +0.7 | |
914,282 | - | SMa1641 | 0.20 | -0.3 | |
914,316 | + | SMa1641 | 0.23 | -0.2 | |
914,317 | - | SMa1641 | 0.23 | -0.4 | |
914,317 | - | SMa1641 | 0.23 | -0.4 | |
914,317 | - | SMa1641 | 0.23 | -0.1 | |
914,317 | - | SMa1641 | 0.23 | -0.1 | |
914,412 | - | SMa1641 | 0.30 | -0.8 | |
914,442 | + | SMa1641 | 0.32 | -1.4 | |
914,443 | - | SMa1641 | 0.33 | -0.6 | |
914,443 | - | SMa1641 | 0.33 | -0.9 | |
914,608 | - | SMa1641 | 0.45 | -0.0 | |
914,608 | - | SMa1641 | 0.45 | -0.5 | |
914,638 | - | SMa1641 | 0.47 | -0.2 | |
914,638 | - | SMa1641 | 0.47 | -0.8 | |
914,669 | - | SMa1641 | 0.50 | -2.6 | |
914,908 | + | SMa1641 | 0.68 | -0.1 | |
914,966 | + | SMa1641 | 0.72 | +0.0 |
Or see this region's nucleotide sequence