Experiment: Fusidic 0.0001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21082 and SM_b21083 are separated by 135 nucleotides SM_b21083 and SM_b21084 overlap by 4 nucleotides SM_b21084 and SM_b21085 are separated by 62 nucleotides
SM_b21082: SM_b21082 - mannose-6-phosphate isomerase, GDP-mannose pyrophosphorylase, at 719,985 to 722,288
_b21082
SM_b21083: SM_b21083 - hypothetical protein, at 722,424 to 722,867
_b21083
SM_b21084: SM_b21084 - hypothetical protein, at 722,864 to 723,217
_b21084
SM_b21085: SM_b21085 - hypothetical protein, at 723,280 to 724,932
_b21085
Position (kb) 722
723 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 721.452 kb on + strand, within SM_b21082 at 721.534 kb on + strand, within SM_b21082 at 721.589 kb on + strand, within SM_b21082 at 721.589 kb on + strand, within SM_b21082 at 721.589 kb on + strand, within SM_b21082 at 721.589 kb on + strand, within SM_b21082 at 721.589 kb on + strand at 721.590 kb on - strand, within SM_b21082 at 721.590 kb on - strand, within SM_b21082 at 721.590 kb on - strand, within SM_b21082 at 721.590 kb on - strand, within SM_b21082 at 721.590 kb on - strand, within SM_b21082 at 721.723 kb on - strand, within SM_b21082 at 721.866 kb on + strand, within SM_b21082 at 721.867 kb on - strand, within SM_b21082 at 722.072 kb on + strand at 722.155 kb on + strand at 722.155 kb on + strand at 722.155 kb on + strand at 722.160 kb on + strand at 722.160 kb on + strand at 722.160 kb on + strand at 722.160 kb on + strand at 722.160 kb on + strand at 722.160 kb on + strand at 722.160 kb on + strand at 722.160 kb on + strand at 722.161 kb on - strand at 722.161 kb on - strand at 722.188 kb on - strand at 722.214 kb on + strand at 722.273 kb on + strand at 722.273 kb on + strand at 722.312 kb on + strand at 722.313 kb on - strand at 722.316 kb on + strand at 722.337 kb on - strand at 722.337 kb on - strand at 722.362 kb on - strand at 722.369 kb on - strand at 723.140 kb on + strand, within SM_b21084 at 723.140 kb on + strand, within SM_b21084 at 723.219 kb on + strand at 723.220 kb on - strand at 723.220 kb on - strand at 723.221 kb on + strand at 723.476 kb on - strand, within SM_b21085
Per-strain Table
Position Strand Gene LocusTag Fraction Fusidic 0.0001 mg/ml remove 721,452 + SM_b21082 0.64 -0.6 721,534 + SM_b21082 0.67 -1.5 721,589 + SM_b21082 0.70 -0.8 721,589 + SM_b21082 0.70 -2.8 721,589 + SM_b21082 0.70 -1.9 721,589 + SM_b21082 0.70 +0.3 721,589 + -0.7 721,590 - SM_b21082 0.70 -0.3 721,590 - SM_b21082 0.70 -0.1 721,590 - SM_b21082 0.70 +0.3 721,590 - SM_b21082 0.70 +0.4 721,590 - SM_b21082 0.70 -0.4 721,723 - SM_b21082 0.75 -0.0 721,866 + SM_b21082 0.82 +0.0 721,867 - SM_b21082 0.82 +0.0 722,072 + -1.4 722,155 + +0.8 722,155 + +0.1 722,155 + +0.4 722,160 + -2.3 722,160 + -0.0 722,160 + +0.4 722,160 + +0.0 722,160 + +1.4 722,160 + +0.8 722,160 + -0.3 722,160 + +1.4 722,161 - -0.2 722,161 - -0.5 722,188 - -0.7 722,214 + +0.3 722,273 + +0.5 722,273 + +0.2 722,312 + -0.7 722,313 - -0.1 722,316 + +0.4 722,337 - +0.0 722,337 - -0.1 722,362 - -0.2 722,369 - +0.8 723,140 + SM_b21084 0.78 +0.5 723,140 + SM_b21084 0.78 +0.5 723,219 + +0.2 723,220 - +0.5 723,220 - +1.3 723,221 + -0.6 723,476 - SM_b21085 0.12 +1.0
Or see this region's nucleotide sequence