Experiment: Fusidic 0.0001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21057 and SM_b21058 are separated by 52 nucleotides SM_b21058 and SM_b21059 are separated by 23 nucleotides SM_b21059 and SM_b21060 are separated by 4 nucleotides SM_b21060 and SM_b21061 are separated by 22 nucleotides
SM_b21057: SM_b21057 - hypothetical protein, at 691,767 to 692,645
_b21057
SM_b21058: SM_b21058 - glucose-1-phosphate cytidylyltransferase, at 692,698 to 692,919
_b21058
SM_b21059: SM_b21059 - glucose-1-phosphate cytidylyltransferase, at 692,943 to 693,467
_b21059
SM_b21060: SM_b21060 - sugar nucleotide epimerase dehydratase, at 693,472 to 694,521
_b21060
SM_b21061: SM_b21061 - NDP-hexose 3-C-methyltransferase, at 694,544 to 695,791
_b21061
Position (kb) 693
694
695 Strain fitness (log2 ratio) -2
-1
0
1 at 692.531 kb on + strand, within SM_b21057 at 692.531 kb on + strand, within SM_b21057 at 692.532 kb on - strand, within SM_b21057 at 692.648 kb on + strand at 692.648 kb on + strand at 692.710 kb on - strand at 692.710 kb on - strand at 692.818 kb on + strand, within SM_b21058 at 692.819 kb on - strand, within SM_b21058 at 692.819 kb on - strand, within SM_b21058 at 692.872 kb on + strand, within SM_b21058 at 692.897 kb on - strand at 692.897 kb on - strand at 693.057 kb on - strand, within SM_b21059 at 693.288 kb on + strand, within SM_b21059 at 693.289 kb on - strand, within SM_b21059 at 693.395 kb on + strand, within SM_b21059 at 693.395 kb on + strand, within SM_b21059 at 693.396 kb on - strand, within SM_b21059 at 693.396 kb on - strand, within SM_b21059 at 693.396 kb on - strand, within SM_b21059 at 693.487 kb on - strand at 693.502 kb on + strand at 693.503 kb on - strand at 693.503 kb on - strand at 693.506 kb on + strand at 693.506 kb on + strand at 693.506 kb on + strand at 693.506 kb on + strand at 693.506 kb on + strand at 693.506 kb on + strand at 693.507 kb on - strand at 693.507 kb on - strand at 693.507 kb on - strand at 693.507 kb on - strand at 693.677 kb on + strand, within SM_b21060 at 693.677 kb on + strand, within SM_b21060 at 693.677 kb on + strand, within SM_b21060 at 693.677 kb on + strand, within SM_b21060 at 693.678 kb on - strand, within SM_b21060 at 693.678 kb on - strand, within SM_b21060 at 693.678 kb on - strand, within SM_b21060 at 693.826 kb on + strand, within SM_b21060 at 693.827 kb on - strand, within SM_b21060 at 693.827 kb on - strand, within SM_b21060 at 693.886 kb on + strand, within SM_b21060 at 693.887 kb on - strand, within SM_b21060 at 693.951 kb on + strand, within SM_b21060 at 693.951 kb on + strand, within SM_b21060 at 693.952 kb on - strand, within SM_b21060 at 693.976 kb on + strand, within SM_b21060 at 694.055 kb on - strand, within SM_b21060 at 694.105 kb on - strand, within SM_b21060 at 694.105 kb on - strand, within SM_b21060 at 694.117 kb on + strand, within SM_b21060 at 694.117 kb on + strand, within SM_b21060 at 694.118 kb on - strand, within SM_b21060 at 694.118 kb on - strand, within SM_b21060 at 694.118 kb on - strand, within SM_b21060 at 694.120 kb on - strand, within SM_b21060 at 694.120 kb on - strand, within SM_b21060 at 694.192 kb on + strand, within SM_b21060 at 694.192 kb on + strand, within SM_b21060 at 694.193 kb on - strand, within SM_b21060 at 694.303 kb on + strand, within SM_b21060 at 694.304 kb on - strand, within SM_b21060 at 694.370 kb on - strand, within SM_b21060 at 694.370 kb on - strand, within SM_b21060 at 694.442 kb on + strand at 694.442 kb on + strand at 694.442 kb on + strand at 694.442 kb on + strand at 694.442 kb on + strand at 694.443 kb on - strand at 694.443 kb on - strand at 694.481 kb on + strand at 694.481 kb on + strand at 694.501 kb on - strand at 694.519 kb on + strand at 694.571 kb on - strand at 694.787 kb on + strand, within SM_b21061 at 694.787 kb on + strand, within SM_b21061 at 694.787 kb on + strand, within SM_b21061 at 694.787 kb on + strand, within SM_b21061 at 694.788 kb on - strand, within SM_b21061 at 694.813 kb on - strand, within SM_b21061 at 694.919 kb on + strand, within SM_b21061 at 694.920 kb on - strand, within SM_b21061 at 694.920 kb on - strand, within SM_b21061 at 694.989 kb on + strand, within SM_b21061 at 695.126 kb on - strand, within SM_b21061 at 695.127 kb on + strand, within SM_b21061 at 695.127 kb on + strand, within SM_b21061 at 695.174 kb on + strand, within SM_b21061 at 695.174 kb on + strand, within SM_b21061 at 695.174 kb on + strand, within SM_b21061 at 695.175 kb on - strand, within SM_b21061 at 695.175 kb on - strand, within SM_b21061 at 695.175 kb on - strand, within SM_b21061 at 695.234 kb on + strand, within SM_b21061 at 695.235 kb on - strand, within SM_b21061 at 695.235 kb on - strand, within SM_b21061 at 695.254 kb on - strand, within SM_b21061 at 695.282 kb on + strand, within SM_b21061 at 695.282 kb on + strand, within SM_b21061 at 695.333 kb on + strand, within SM_b21061 at 695.334 kb on - strand, within SM_b21061 at 695.334 kb on - strand, within SM_b21061 at 695.407 kb on + strand, within SM_b21061 at 695.408 kb on - strand, within SM_b21061 at 695.408 kb on - strand, within SM_b21061 at 695.418 kb on - strand, within SM_b21061
Per-strain Table
Position Strand Gene LocusTag Fraction Fusidic 0.0001 mg/ml remove 692,531 + SM_b21057 0.87 +0.1 692,531 + SM_b21057 0.87 +0.1 692,532 - SM_b21057 0.87 -0.6 692,648 + -0.2 692,648 + -0.5 692,710 - +0.2 692,710 - +0.0 692,818 + SM_b21058 0.54 -0.1 692,819 - SM_b21058 0.55 -0.1 692,819 - SM_b21058 0.55 +0.8 692,872 + SM_b21058 0.78 -0.9 692,897 - +0.7 692,897 - -0.6 693,057 - SM_b21059 0.22 +0.6 693,288 + SM_b21059 0.66 +0.5 693,289 - SM_b21059 0.66 +0.0 693,395 + SM_b21059 0.86 +0.1 693,395 + SM_b21059 0.86 -1.5 693,396 - SM_b21059 0.86 -0.2 693,396 - SM_b21059 0.86 -0.1 693,396 - SM_b21059 0.86 +0.0 693,487 - +0.5 693,502 + -0.5 693,503 - -0.0 693,503 - -0.5 693,506 + -0.8 693,506 + -0.0 693,506 + -1.5 693,506 + -1.6 693,506 + +0.8 693,506 + +0.7 693,507 - -0.5 693,507 - +0.5 693,507 - +0.1 693,507 - -0.8 693,677 + SM_b21060 0.20 -0.5 693,677 + SM_b21060 0.20 +0.1 693,677 + SM_b21060 0.20 -0.7 693,677 + SM_b21060 0.20 -1.3 693,678 - SM_b21060 0.20 +0.2 693,678 - SM_b21060 0.20 -0.2 693,678 - SM_b21060 0.20 +0.5 693,826 + SM_b21060 0.34 +0.4 693,827 - SM_b21060 0.34 -0.2 693,827 - SM_b21060 0.34 -1.0 693,886 + SM_b21060 0.39 +1.6 693,887 - SM_b21060 0.40 -1.1 693,951 + SM_b21060 0.46 -0.7 693,951 + SM_b21060 0.46 +0.1 693,952 - SM_b21060 0.46 +0.1 693,976 + SM_b21060 0.48 -0.0 694,055 - SM_b21060 0.56 -0.4 694,105 - SM_b21060 0.60 +0.2 694,105 - SM_b21060 0.60 +0.5 694,117 + SM_b21060 0.61 +0.3 694,117 + SM_b21060 0.61 -0.2 694,118 - SM_b21060 0.62 +0.7 694,118 - SM_b21060 0.62 -0.2 694,118 - SM_b21060 0.62 -1.5 694,120 - SM_b21060 0.62 +0.1 694,120 - SM_b21060 0.62 -0.2 694,192 + SM_b21060 0.69 -1.2 694,192 + SM_b21060 0.69 -0.6 694,193 - SM_b21060 0.69 -0.1 694,303 + SM_b21060 0.79 +1.2 694,304 - SM_b21060 0.79 +0.1 694,370 - SM_b21060 0.86 +0.1 694,370 - SM_b21060 0.86 +0.3 694,442 + -0.2 694,442 + +0.4 694,442 + -0.2 694,442 + +0.0 694,442 + +1.0 694,443 - -0.1 694,443 - +0.2 694,481 + -0.8 694,481 + -0.2 694,501 - +0.1 694,519 + +0.4 694,571 - +0.7 694,787 + SM_b21061 0.19 +0.4 694,787 + SM_b21061 0.19 +0.1 694,787 + SM_b21061 0.19 +0.2 694,787 + SM_b21061 0.19 +0.2 694,788 - SM_b21061 0.20 +0.1 694,813 - SM_b21061 0.22 +0.1 694,919 + SM_b21061 0.30 -0.2 694,920 - SM_b21061 0.30 -1.3 694,920 - SM_b21061 0.30 +0.3 694,989 + SM_b21061 0.36 -0.1 695,126 - SM_b21061 0.47 -1.2 695,127 + SM_b21061 0.47 -0.1 695,127 + SM_b21061 0.47 +0.6 695,174 + SM_b21061 0.50 +0.8 695,174 + SM_b21061 0.50 -1.3 695,174 + SM_b21061 0.50 +0.4 695,175 - SM_b21061 0.51 +0.7 695,175 - SM_b21061 0.51 -0.5 695,175 - SM_b21061 0.51 -0.4 695,234 + SM_b21061 0.55 -0.3 695,235 - SM_b21061 0.55 +0.2 695,235 - SM_b21061 0.55 -0.1 695,254 - SM_b21061 0.57 -1.6 695,282 + SM_b21061 0.59 +0.4 695,282 + SM_b21061 0.59 -0.7 695,333 + SM_b21061 0.63 +0.2 695,334 - SM_b21061 0.63 -0.4 695,334 - SM_b21061 0.63 -1.9 695,407 + SM_b21061 0.69 -0.5 695,408 - SM_b21061 0.69 +0.6 695,408 - SM_b21061 0.69 -0.2 695,418 - SM_b21061 0.70 -0.9
Or see this region's nucleotide sequence