Strain Fitness in Sinorhizobium meliloti 1021 around SM_b20995
Experiment: Fusidic 0.0001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Fusidic 0.0001 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,230,194 | + | +1.3 | |||
1,230,195 | - | +0.2 | |||
1,230,240 | - | +0.2 | |||
1,230,250 | - | +0.6 | |||
1,230,273 | + | -2.0 | |||
1,230,273 | + | -0.0 | |||
1,230,273 | + | +0.7 | |||
1,230,273 | + | +0.1 | |||
1,230,274 | - | +0.2 | |||
1,230,274 | - | +0.4 | |||
1,230,281 | - | +1.8 | |||
1,230,463 | + | SM_b20994 | 0.31 | +1.5 | |
1,230,464 | - | SM_b20994 | 0.31 | +1.9 | |
1,230,464 | - | SM_b20994 | 0.31 | +1.3 | |
1,230,730 | + | SM_b20994 | 0.81 | +1.4 | |
1,230,730 | + | SM_b20994 | 0.81 | +1.5 | |
1,230,914 | + | +1.8 | |||
1,230,927 | + | +1.6 | |||
1,230,928 | - | +0.8 | |||
1,230,928 | - | -0.7 | |||
1,230,939 | - | -0.7 | |||
1,230,940 | + | +1.4 | |||
1,230,941 | - | -0.6 | |||
1,230,983 | + | +1.4 | |||
1,230,987 | + | +1.5 | |||
1,230,987 | + | +1.4 | |||
1,230,999 | - | -0.4 | |||
1,231,012 | + | +1.5 | |||
1,232,510 | - | +1.4 | |||
1,232,510 | - | +0.7 | |||
1,232,561 | - | -0.9 | |||
1,232,561 | - | +1.2 | |||
1,233,345 | - | +0.5 | |||
1,233,366 | - | +0.3 | |||
1,233,366 | - | -2.2 | |||
1,233,366 | - | +0.4 | |||
1,233,385 | - | -1.0 |
Or see this region's nucleotide sequence