Strain Fitness in Sinorhizobium meliloti 1021 around SM_b20942
Experiment: Fusidic 0.0001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Fusidic 0.0001 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,167,476 | + | -0.5 | |||
1,167,477 | - | +0.3 | |||
1,167,511 | - | +0.1 | |||
1,167,608 | + | -0.0 | |||
1,167,617 | + | +0.5 | |||
1,167,617 | + | +0.2 | |||
1,167,617 | + | +1.2 | |||
1,167,618 | - | -0.4 | |||
1,167,719 | - | -0.3 | |||
1,167,811 | - | -0.2 | |||
1,167,835 | + | -0.3 | |||
1,167,836 | - | +0.3 | |||
1,167,871 | - | +0.3 | |||
1,167,902 | + | +0.3 | |||
1,167,969 | + | +0.0 | |||
1,168,190 | - | -4.0 | |||
1,168,423 | + | SM_b20942 | 0.28 | -1.8 | |
1,168,554 | + | SM_b20942 | 0.41 | -4.6 | |
1,168,628 | - | SM_b20942 | 0.48 | +0.1 | |
1,168,628 | - | SM_b20942 | 0.48 | -1.6 | |
1,168,646 | + | SM_b20942 | 0.50 | -3.1 | |
1,168,658 | - | SM_b20942 | 0.51 | +0.3 | |
1,168,790 | - | SM_b20942 | 0.65 | -1.4 | |
1,168,822 | + | SM_b20942 | 0.68 | -3.1 | |
1,168,822 | + | SM_b20942 | 0.68 | -3.1 | |
1,168,825 | - | SM_b20942 | 0.68 | -2.0 | |
1,168,825 | - | SM_b20942 | 0.68 | -2.2 | |
1,168,825 | - | SM_b20942 | 0.68 | -2.3 | |
1,168,870 | + | SM_b20942 | 0.73 | -2.2 | |
1,169,055 | - | -0.3 |
Or see this region's nucleotide sequence