Strain Fitness in Sinorhizobium meliloti 1021 around SM_b20880

Experiment: Fusidic 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fusidic 0.0001 mg/ml
1,285,395	+		SM_b20879	0.41	+0.1
1,285,396	-		SM_b20879	0.41	-0.8
1,285,396	-		SM_b20879	0.41	+0.2
1,285,396	-		SM_b20879	0.41	+0.3
1,285,462	+		SM_b20879	0.55	+0.4
1,285,462	+		SM_b20879	0.55	-0.1
1,285,462	+		SM_b20879	0.55	-0.2
1,285,462	+		SM_b20879	0.55	-0.2
1,285,463	-		SM_b20879	0.56	-0.3
1,285,464	+		SM_b20879	0.56	-0.5
1,285,465	-		SM_b20879	0.56	-0.4
1,285,465	-		SM_b20879	0.56	+0.5
1,285,465	-		SM_b20879	0.56	-0.1
1,285,465	-		SM_b20879	0.56	-1.4
1,285,465	-		SM_b20879	0.56	-0.4
1,285,664	+				-0.1
1,285,664	+				+0.6
1,285,665	-				-1.0
1,285,690	+				+0.1
1,285,690	+				+0.3
1,285,690	+				+0.2
1,285,690	+				-0.1
1,285,690	+				-0.1
1,285,691	-				+0.2
1,285,750	+				+0.4
1,285,868	+				-0.3
1,285,868	+				+0.2
1,285,868	+				+0.4
1,285,869	-				-0.4
1,285,869	-				+0.1
1,285,964	+				-1.9
1,285,965	-				+0.8
1,286,030	-				-1.2
1,286,030	-				-1.5
1,286,153	+				-1.2
1,286,255	-				-1.0
1,286,257	-				+0.6
1,286,557	+		SM_b20880	0.20	-1.1
1,286,716	-		SM_b20880	0.30	-1.4
1,286,716	-		SM_b20880	0.30	-1.2
1,286,863	-		SM_b20880	0.40	+0.9
1,286,928	+		SM_b20880	0.44	-2.1
1,286,928	+		SM_b20880	0.44	-0.9
1,287,216	+		SM_b20880	0.63	-0.9
1,287,216	+		SM_b20880	0.63	-1.5
1,287,217	-		SM_b20880	0.63	-1.5
1,287,217	-		SM_b20880	0.63	-1.2
1,287,222	+		SM_b20880	0.63	-1.6
1,287,223	-		SM_b20880	0.64	-2.7
1,287,223	-		SM_b20880	0.64	-3.5
1,287,223	-		SM_b20880	0.64	-1.5
1,287,249	+		SM_b20880	0.65	-1.9
1,287,249	+		SM_b20880	0.65	-1.2
1,287,249	+		SM_b20880	0.65	-1.6
1,287,250	-		SM_b20880	0.65	-2.1
1,287,803	-				-2.6
1,287,903	-				+0.3
1,287,925	-				-0.1
1,287,958	+				-0.2
1,287,987	+				-0.2
1,287,988	-				+0.5
1,288,056	+				+0.0
1,288,057	-				+0.1
1,288,057	-				+0.4
1,288,099	-		SM_b20881	0.15	-0.3
1,288,099	-		SM_b20881	0.15	+1.0
1,288,211	+		SM_b20881	0.39	-1.9
1,288,228	-		SM_b20881	0.43	+0.2
1,288,228	-		SM_b20881	0.43	-0.9
1,288,249	+		SM_b20881	0.47	-0.8
1,288,249	+		SM_b20881	0.47	+0.7
1,288,282	-		SM_b20881	0.54	+0.1
1,288,319	+		SM_b20881	0.62	+0.3
1,288,319	+		SM_b20881	0.62	+0.0
1,288,320	-		SM_b20881	0.63	+0.3
1,288,392	+		SM_b20881	0.78	+0.4
1,288,393	-		SM_b20881	0.78	+0.0
1,288,393	-		SM_b20881	0.78	-2.1
1,288,589	+		SM_b20882	0.11	+0.6
1,288,589	+		SM_b20882	0.11	+0.6