Experiment: Fusidic 0.0001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20458 and SM_b20459 overlap by 1 nucleotides SM_b20459 and SM_b20460 overlap by 4 nucleotides
SM_b20458: SM_b20458 - dTDP-glucose 4,6-dehydratase, at 470,412 to 471,458
_b20458
SM_b20459: SM_b20459 - UDP-glucose 4-epimerase, at 471,458 to 472,444
_b20459
SM_b20460: SM_b20460 - cellulose synthase, at 472,441 to 474,306
_b20460
Position (kb)
471
472
473 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 470.588 kb on + strand, within SM_b20458 at 470.589 kb on - strand, within SM_b20458 at 470.701 kb on - strand, within SM_b20458 at 470.701 kb on - strand, within SM_b20458 at 470.701 kb on - strand, within SM_b20458 at 470.703 kb on - strand, within SM_b20458 at 470.733 kb on + strand, within SM_b20458 at 470.734 kb on - strand, within SM_b20458 at 470.884 kb on - strand, within SM_b20458 at 470.884 kb on - strand, within SM_b20458 at 470.884 kb on - strand, within SM_b20458 at 470.884 kb on - strand, within SM_b20458 at 470.923 kb on - strand, within SM_b20458 at 470.923 kb on - strand, within SM_b20458 at 470.923 kb on - strand, within SM_b20458 at 471.015 kb on + strand, within SM_b20458 at 471.089 kb on + strand, within SM_b20458 at 471.089 kb on + strand, within SM_b20458 at 471.099 kb on + strand, within SM_b20458 at 471.099 kb on + strand, within SM_b20458 at 471.100 kb on - strand, within SM_b20458 at 471.100 kb on - strand, within SM_b20458 at 471.100 kb on - strand, within SM_b20458 at 471.405 kb on + strand at 471.473 kb on - strand at 471.473 kb on - strand at 471.498 kb on - strand at 471.554 kb on + strand at 471.555 kb on - strand at 471.616 kb on + strand, within SM_b20459 at 471.617 kb on - strand, within SM_b20459 at 471.617 kb on - strand, within SM_b20459 at 471.732 kb on - strand, within SM_b20459 at 471.824 kb on + strand at 471.824 kb on + strand, within SM_b20459 at 471.824 kb on + strand, within SM_b20459 at 471.824 kb on + strand, within SM_b20459 at 471.824 kb on + strand, within SM_b20459 at 471.824 kb on + strand, within SM_b20459 at 471.824 kb on + strand, within SM_b20459 at 471.825 kb on - strand, within SM_b20459 at 471.825 kb on - strand, within SM_b20459 at 471.825 kb on - strand, within SM_b20459 at 471.884 kb on + strand, within SM_b20459 at 471.884 kb on + strand, within SM_b20459 at 471.890 kb on - strand, within SM_b20459 at 471.890 kb on - strand, within SM_b20459 at 471.890 kb on - strand, within SM_b20459 at 471.890 kb on - strand, within SM_b20459 at 471.926 kb on + strand, within SM_b20459 at 471.927 kb on - strand, within SM_b20459 at 471.965 kb on + strand, within SM_b20459 at 472.123 kb on - strand, within SM_b20459 at 472.130 kb on + strand, within SM_b20459 at 472.131 kb on - strand, within SM_b20459 at 472.131 kb on - strand, within SM_b20459 at 472.132 kb on + strand, within SM_b20459 at 472.133 kb on - strand, within SM_b20459 at 472.133 kb on - strand at 472.133 kb on - strand, within SM_b20459 at 472.239 kb on + strand, within SM_b20459 at 472.239 kb on + strand, within SM_b20459 at 472.270 kb on + strand, within SM_b20459 at 472.627 kb on - strand at 472.627 kb on - strand at 472.627 kb on - strand at 472.672 kb on + strand, within SM_b20460 at 472.673 kb on - strand, within SM_b20460 at 472.871 kb on + strand, within SM_b20460 at 472.871 kb on + strand, within SM_b20460 at 472.872 kb on - strand, within SM_b20460 at 472.872 kb on - strand, within SM_b20460 at 472.927 kb on + strand, within SM_b20460 at 472.927 kb on + strand, within SM_b20460 at 472.928 kb on - strand, within SM_b20460 at 472.928 kb on - strand, within SM_b20460 at 472.928 kb on - strand, within SM_b20460 at 472.928 kb on - strand, within SM_b20460 at 472.987 kb on + strand, within SM_b20460 at 472.987 kb on + strand, within SM_b20460 at 472.988 kb on - strand, within SM_b20460 at 472.997 kb on - strand, within SM_b20460 at 473.002 kb on + strand, within SM_b20460 at 473.104 kb on + strand, within SM_b20460 at 473.104 kb on + strand, within SM_b20460 at 473.105 kb on - strand, within SM_b20460 at 473.105 kb on - strand, within SM_b20460 at 473.171 kb on - strand, within SM_b20460 at 473.210 kb on - strand, within SM_b20460 at 473.236 kb on - strand, within SM_b20460 at 473.249 kb on - strand, within SM_b20460 at 473.437 kb on - strand, within SM_b20460
Per-strain Table
Position Strand Gene LocusTag Fraction Fusidic 0.0001 mg/ml remove 470,588 + SM_b20458 0.17 -0.9 470,589 - SM_b20458 0.17 +0.3 470,701 - SM_b20458 0.28 -0.3 470,701 - SM_b20458 0.28 +1.5 470,701 - SM_b20458 0.28 +0.4 470,703 - SM_b20458 0.28 +0.4 470,733 + SM_b20458 0.31 +0.0 470,734 - SM_b20458 0.31 +0.1 470,884 - SM_b20458 0.45 -0.2 470,884 - SM_b20458 0.45 -0.1 470,884 - SM_b20458 0.45 -0.8 470,884 - SM_b20458 0.45 -0.2 470,923 - SM_b20458 0.49 -0.5 470,923 - SM_b20458 0.49 -2.0 470,923 - SM_b20458 0.49 +2.2 471,015 + SM_b20458 0.58 -1.1 471,089 + SM_b20458 0.65 +0.2 471,089 + SM_b20458 0.65 -0.8 471,099 + SM_b20458 0.66 +0.6 471,099 + SM_b20458 0.66 -1.0 471,100 - SM_b20458 0.66 +0.1 471,100 - SM_b20458 0.66 -0.1 471,100 - SM_b20458 0.66 +1.3 471,405 + +0.8 471,473 - +0.3 471,473 - -0.3 471,498 - -0.0 471,554 + +0.2 471,555 - +0.3 471,616 + SM_b20459 0.16 -0.6 471,617 - SM_b20459 0.16 -0.0 471,617 - SM_b20459 0.16 -0.7 471,732 - SM_b20459 0.28 -1.4 471,824 + -0.0 471,824 + SM_b20459 0.37 +1.5 471,824 + SM_b20459 0.37 +0.2 471,824 + SM_b20459 0.37 -0.5 471,824 + SM_b20459 0.37 -0.2 471,824 + SM_b20459 0.37 -0.3 471,824 + SM_b20459 0.37 +0.1 471,825 - SM_b20459 0.37 +0.2 471,825 - SM_b20459 0.37 +0.0 471,825 - SM_b20459 0.37 +2.1 471,884 + SM_b20459 0.43 -0.4 471,884 + SM_b20459 0.43 +1.9 471,890 - SM_b20459 0.44 +0.1 471,890 - SM_b20459 0.44 -0.2 471,890 - SM_b20459 0.44 -0.8 471,890 - SM_b20459 0.44 -0.1 471,926 + SM_b20459 0.47 -0.7 471,927 - SM_b20459 0.48 -0.3 471,965 + SM_b20459 0.51 -1.1 472,123 - SM_b20459 0.67 -0.3 472,130 + SM_b20459 0.68 -2.8 472,131 - SM_b20459 0.68 +0.2 472,131 - SM_b20459 0.68 +0.0 472,132 + SM_b20459 0.68 -0.1 472,133 - SM_b20459 0.68 +0.1 472,133 - -0.3 472,133 - SM_b20459 0.68 +0.3 472,239 + SM_b20459 0.79 +0.2 472,239 + SM_b20459 0.79 +0.3 472,270 + SM_b20459 0.82 +0.5 472,627 - +0.2 472,627 - +0.7 472,627 - -1.2 472,672 + SM_b20460 0.12 +0.2 472,673 - SM_b20460 0.12 -0.3 472,871 + SM_b20460 0.23 -1.5 472,871 + SM_b20460 0.23 -0.1 472,872 - SM_b20460 0.23 +0.2 472,872 - SM_b20460 0.23 +0.9 472,927 + SM_b20460 0.26 -0.3 472,927 + SM_b20460 0.26 +0.7 472,928 - SM_b20460 0.26 -0.4 472,928 - SM_b20460 0.26 -0.5 472,928 - SM_b20460 0.26 -0.8 472,928 - SM_b20460 0.26 -0.7 472,987 + SM_b20460 0.29 -0.3 472,987 + SM_b20460 0.29 -0.3 472,988 - SM_b20460 0.29 -0.4 472,997 - SM_b20460 0.30 -1.0 473,002 + SM_b20460 0.30 -2.0 473,104 + SM_b20460 0.36 -0.0 473,104 + SM_b20460 0.36 -0.9 473,105 - SM_b20460 0.36 -0.2 473,105 - SM_b20460 0.36 +0.4 473,171 - SM_b20460 0.39 -0.0 473,210 - SM_b20460 0.41 -0.0 473,236 - SM_b20460 0.43 -0.9 473,249 - SM_b20460 0.43 +0.3 473,437 - SM_b20460 0.53 +0.5
Or see this region's nucleotide sequence