Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS12480

Experiment: R2A control

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A control
2,782,333	+		LRK54_RS12470	0.45	+0.7
2,782,384	+		LRK54_RS12470	0.55	-0.4
2,782,384	+		LRK54_RS12470	0.55	+0.1
2,782,463	+		LRK54_RS12470	0.71	+1.6
2,782,463	+		LRK54_RS12470	0.71	+1.1
2,782,463	+		LRK54_RS12470	0.71	+0.3
2,782,463	+		LRK54_RS12470	0.71	-0.3
2,782,463	+		LRK54_RS12470	0.71	-0.1
2,782,463	+		LRK54_RS12470	0.71	+0.3
2,782,463	+		LRK54_RS12470	0.71	+0.4
2,782,463	+		LRK54_RS12470	0.71	+1.6
2,782,463	+		LRK54_RS12470	0.71	+0.5
2,782,463	+		LRK54_RS12470	0.71	+0.8
2,782,464	-		LRK54_RS12470	0.71	-0.1
2,782,464	-		LRK54_RS12470	0.71	-0.3
2,782,464	-		LRK54_RS12470	0.71	-0.2
2,782,464	-		LRK54_RS12470	0.71	-0.1
2,782,464	-		LRK54_RS12470	0.71	+1.2
2,782,464	-		LRK54_RS12470	0.71	+0.6
2,782,464	-		LRK54_RS12470	0.71	+0.3
2,782,464	-		LRK54_RS12470	0.71	+0.3
2,782,464	-		LRK54_RS12470	0.71	+0.8
2,782,464	-		LRK54_RS12470	0.71	+0.6
2,782,822	+		LRK54_RS12475	0.30	+0.6
2,782,822	+		LRK54_RS12475	0.30	-0.6
2,782,822	+		LRK54_RS12475	0.30	-0.5
2,782,823	-		LRK54_RS12475	0.31	+0.4
2,782,823	-		LRK54_RS12475	0.31	+0.8
2,782,823	-		LRK54_RS12475	0.31	+0.2
2,782,823	-		LRK54_RS12475	0.31	+0.3
2,782,823	-		LRK54_RS12475	0.31	-1.6
2,782,823	-		LRK54_RS12475	0.31	-0.7
2,782,823	-		LRK54_RS12475	0.31	+1.3
2,782,823	-		LRK54_RS12475	0.31	+3.2
2,782,823	-		LRK54_RS12475	0.31	-0.9
2,782,823	-		LRK54_RS12475	0.31	-0.4
2,782,823	-		LRK54_RS12475	0.31	-2.1
2,782,823	-		LRK54_RS12475	0.31	-0.9
2,782,975	+		LRK54_RS12475	0.53	+0.0
2,782,975	+		LRK54_RS12475	0.53	-0.2
2,782,975	+		LRK54_RS12475	0.53	+0.9
2,782,975	+		LRK54_RS12475	0.53	-0.3
2,782,976	-		LRK54_RS12475	0.53	-0.4
2,782,976	-		LRK54_RS12475	0.53	+0.6
2,783,088	-		LRK54_RS12475	0.69	+0.9
2,783,088	-		LRK54_RS12475	0.69	+1.5
2,783,088	-		LRK54_RS12475	0.69	-0.6
2,783,155	+		LRK54_RS12475	0.79	-0.1
2,783,155	+		LRK54_RS12475	0.79	+1.0
2,783,155	+		LRK54_RS12475	0.79	-0.7
2,783,155	+		LRK54_RS12475	0.79	+1.7
2,783,155	+		LRK54_RS12475	0.79	+0.7
2,783,155	+		LRK54_RS12475	0.79	+0.5
2,783,155	+		LRK54_RS12475	0.79	+0.1
2,783,156	-		LRK54_RS12475	0.79	-0.4
2,783,156	-		LRK54_RS12475	0.79	+1.1
2,783,156	-		LRK54_RS12475	0.79	-1.2
2,783,156	-		LRK54_RS12475	0.79	+0.1
2,783,156	-		LRK54_RS12475	0.79	+0.2
2,783,156	-		LRK54_RS12475	0.79	+0.0
2,783,156	-		LRK54_RS12475	0.79	+0.7
2,783,249	+				+0.2
2,783,467	-		LRK54_RS12480	0.18	-0.1
2,783,500	+		LRK54_RS12480	0.21	+1.3
2,783,501	-		LRK54_RS12480	0.21	+0.1
2,783,526	+		LRK54_RS12480	0.24	-0.6
2,783,526	+		LRK54_RS12480	0.24	-0.0
2,783,526	+		LRK54_RS12480	0.24	+0.5
2,783,527	-		LRK54_RS12480	0.24	-0.3
2,783,527	-		LRK54_RS12480	0.24	-1.0
2,783,637	+		LRK54_RS12480	0.35	-1.2
2,783,637	+		LRK54_RS12480	0.35	+1.1
2,783,637	+		LRK54_RS12480	0.35	-1.0
2,783,637	+		LRK54_RS12480	0.35	+0.3
2,783,637	+		LRK54_RS12480	0.35	+0.7
2,783,637	+		LRK54_RS12480	0.35	+0.5
2,783,637	+		LRK54_RS12480	0.35	-0.3
2,783,638	-		LRK54_RS12480	0.35	+1.3
2,783,638	-		LRK54_RS12480	0.35	+0.4
2,783,638	-		LRK54_RS12480	0.35	-0.8
2,783,638	-		LRK54_RS12480	0.35	+0.1
2,783,638	-		LRK54_RS12480	0.35	-0.5
2,783,638	-		LRK54_RS12480	0.35	-1.4
2,783,705	+		LRK54_RS12480	0.42	+0.0
2,783,705	+		LRK54_RS12480	0.42	+0.4
2,783,705	+		LRK54_RS12480	0.42	+0.5
2,783,705	+		LRK54_RS12480	0.42	+0.5
2,783,705	+		LRK54_RS12480	0.42	-0.2
2,783,705	+		LRK54_RS12480	0.42	-0.6
2,783,705	+		LRK54_RS12480	0.42	+1.2
2,783,705	+		LRK54_RS12480	0.42	-0.6
2,783,706	-		LRK54_RS12480	0.42	+1.1
2,783,706	-		LRK54_RS12480	0.42	+0.2
2,783,706	-		LRK54_RS12480	0.42	-0.7
2,783,706	-		LRK54_RS12480	0.42	+0.7
2,783,706	-		LRK54_RS12480	0.42	-0.3
2,783,706	-		LRK54_RS12480	0.42	+0.8
2,783,706	-		LRK54_RS12480	0.42	-0.9
2,783,736	+		LRK54_RS12480	0.45	+0.1
2,783,736	+		LRK54_RS12480	0.45	+0.8
2,783,736	+		LRK54_RS12480	0.45	-0.2
2,783,736	+		LRK54_RS12480	0.45	+0.9
2,783,736	+		LRK54_RS12480	0.45	+0.6
2,783,736	+		LRK54_RS12480	0.45	-0.2
2,783,736	+		LRK54_RS12480	0.45	+0.1
2,783,736	+		LRK54_RS12480	0.45	+0.7
2,783,736	+		LRK54_RS12480	0.45	-0.3
2,783,736	+		LRK54_RS12480	0.45	+1.5
2,783,736	+		LRK54_RS12480	0.45	+2.4
2,783,736	+		LRK54_RS12480	0.45	-2.3
2,783,736	+		LRK54_RS12480	0.45	-0.1
2,783,736	+		LRK54_RS12480	0.45	-0.7
2,783,736	+		LRK54_RS12480	0.45	-0.8
2,783,736	+		LRK54_RS12480	0.45	+1.9
2,783,736	+		LRK54_RS12480	0.45	+0.1
2,783,736	+		LRK54_RS12480	0.45	-0.1
2,783,737	-		LRK54_RS12480	0.46	-0.4
2,783,737	-		LRK54_RS12480	0.46	-0.0
2,783,737	-		LRK54_RS12480	0.46	-0.5
2,783,737	-		LRK54_RS12480	0.46	-0.1
2,783,737	-		LRK54_RS12480	0.46	+0.6
2,783,737	-		LRK54_RS12480	0.46	-0.1
2,783,737	-		LRK54_RS12480	0.46	-0.3
2,783,737	-		LRK54_RS12480	0.46	+1.8
2,783,737	-		LRK54_RS12480	0.46	-0.2
2,783,737	-		LRK54_RS12480	0.46	+0.1
2,783,737	-		LRK54_RS12480	0.46	+0.2
2,783,737	-		LRK54_RS12480	0.46	+0.3
2,783,737	-		LRK54_RS12480	0.46	+0.5
2,783,737	-		LRK54_RS12480	0.46	+0.1
2,783,737	-		LRK54_RS12480	0.46	-0.1
2,783,737	-		LRK54_RS12480	0.46	-0.6
2,783,737	-		LRK54_RS12480	0.46	+0.2
2,783,737	-		LRK54_RS12480	0.46	+0.9
2,783,737	-		LRK54_RS12480	0.46	+0.9
2,783,737	-		LRK54_RS12480	0.46	-1.1
2,783,737	-		LRK54_RS12480	0.46	-0.8
2,783,737	-		LRK54_RS12480	0.46	-1.7
2,783,737	-		LRK54_RS12480	0.46	+0.2
2,783,737	-		LRK54_RS12480	0.46	-0.6
2,783,737	-		LRK54_RS12480	0.46	+1.1
2,783,737	-		LRK54_RS12480	0.46	-0.3
2,783,737	-		LRK54_RS12480	0.46	+0.5
2,783,796	+		LRK54_RS12480	0.52	-0.9
2,783,796	+		LRK54_RS12480	0.52	+1.0
2,783,797	-		LRK54_RS12480	0.52	+0.2
2,783,799	+		LRK54_RS12480	0.52	+0.1
2,783,799	+		LRK54_RS12480	0.52	+1.4
2,783,799	+		LRK54_RS12480	0.52	-1.2
2,783,799	+		LRK54_RS12480	0.52	-1.1
2,783,799	+		LRK54_RS12480	0.52	+0.6
2,783,799	+		LRK54_RS12480	0.52	+0.6
2,783,799	+		LRK54_RS12480	0.52	-2.2
2,783,799	+		LRK54_RS12480	0.52	+1.2
2,783,799	+		LRK54_RS12480	0.52	+0.1
2,783,799	+		LRK54_RS12480	0.52	+0.4
2,783,799	+		LRK54_RS12480	0.52	+2.2
2,783,799	+		LRK54_RS12480	0.52	+0.7
2,783,799	+		LRK54_RS12480	0.52	+0.7
2,783,799	+		LRK54_RS12480	0.52	+0.7
2,783,799	+		LRK54_RS12480	0.52	+0.2
2,783,799	+		LRK54_RS12480	0.52	+0.2
2,783,799	+		LRK54_RS12480	0.52	-0.0
2,783,799	+		LRK54_RS12480	0.52	-1.1
2,783,799	+		LRK54_RS12480	0.52	-0.1
2,783,799	+		LRK54_RS12480	0.52	-0.0
2,783,799	+		LRK54_RS12480	0.52	+1.1
2,783,799	+		LRK54_RS12480	0.52	+0.1
2,783,800	-		LRK54_RS12480	0.52	+0.9
2,783,800	-		LRK54_RS12480	0.52	+0.0
2,783,800	-		LRK54_RS12480	0.52	+1.3
2,783,800	-		LRK54_RS12480	0.52	-0.1
2,783,800	-		LRK54_RS12480	0.52	+0.9
2,783,800	-		LRK54_RS12480	0.52	-1.4
2,783,800	-		LRK54_RS12480	0.52	+0.3
2,783,800	-		LRK54_RS12480	0.52	+0.6
2,783,800	-		LRK54_RS12480	0.52	+1.6
2,783,800	-		LRK54_RS12480	0.52	-1.0
2,783,800	-		LRK54_RS12480	0.52	+0.0
2,783,800	-		LRK54_RS12480	0.52	+2.6
2,783,800	-		LRK54_RS12480	0.52	-0.1
2,783,800	-		LRK54_RS12480	0.52	+1.5
2,783,800	-		LRK54_RS12480	0.52	+0.6
2,783,800	-		LRK54_RS12480	0.52	-0.4
2,783,800	-		LRK54_RS12480	0.52	+0.3
2,783,800	-		LRK54_RS12480	0.52	+1.0
2,783,871	+		LRK54_RS12480	0.59	-0.7
2,783,871	+		LRK54_RS12480	0.59	+0.3
2,783,871	+		LRK54_RS12480	0.59	+1.5
2,783,871	+		LRK54_RS12480	0.59	-1.2
2,783,871	+		LRK54_RS12480	0.59	-1.7
2,783,871	+		LRK54_RS12480	0.59	+0.1
2,783,872	-		LRK54_RS12480	0.59	-0.2
2,783,872	-		LRK54_RS12480	0.59	-1.1
2,783,872	-		LRK54_RS12480	0.59	-0.1
2,783,872	-		LRK54_RS12480	0.59	-0.3
2,783,872	-		LRK54_RS12480	0.59	-0.4
2,783,872	-		LRK54_RS12480	0.59	+1.8
2,783,872	-		LRK54_RS12480	0.59	-0.8
2,783,872	-		LRK54_RS12480	0.59	+0.8
2,783,872	-		LRK54_RS12480	0.59	-2.0
2,783,872	-		LRK54_RS12480	0.59	+0.6
2,783,872	-		LRK54_RS12480	0.59	+0.8
2,783,872	-		LRK54_RS12480	0.59	+0.3
2,783,872	-		LRK54_RS12480	0.59	-1.3
2,783,872	-		LRK54_RS12480	0.59	-1.2
2,783,872	-		LRK54_RS12480	0.59	+0.8
2,783,872	-		LRK54_RS12480	0.59	-1.2
2,784,150	+		LRK54_RS12480	0.88	+1.3
2,784,150	+		LRK54_RS12480	0.88	-1.1
2,784,150	+		LRK54_RS12480	0.88	-0.7
2,784,150	+		LRK54_RS12480	0.88	+2.6
2,784,150	+		LRK54_RS12480	0.88	+0.5
2,784,151	-		LRK54_RS12480	0.88	+0.6
2,784,151	-		LRK54_RS12480	0.88	-0.7
2,784,490	+		LRK54_RS12485	0.15	-0.1
2,784,490	+		LRK54_RS12485	0.15	+0.4
2,784,490	+		LRK54_RS12485	0.15	-1.3
2,784,490	+		LRK54_RS12485	0.15	+1.6
2,784,490	+		LRK54_RS12485	0.15	-0.5
2,784,490	+		LRK54_RS12485	0.15	-0.8
2,784,490	+		LRK54_RS12485	0.15	+0.1
2,784,490	+		LRK54_RS12485	0.15	+0.7
2,784,490	+		LRK54_RS12485	0.15	-0.6
2,784,490	+		LRK54_RS12485	0.15	+0.4
2,784,490	+		LRK54_RS12485	0.15	+0.6
2,784,490	+		LRK54_RS12485	0.15	+0.9
2,784,490	+		LRK54_RS12485	0.15	-0.1
2,784,490	+		LRK54_RS12485	0.15	-0.1
2,784,490	+		LRK54_RS12485	0.15	-1.4
2,784,490	+		LRK54_RS12485	0.15	+0.4
2,784,490	+		LRK54_RS12485	0.15	+1.1
2,784,490	+		LRK54_RS12485	0.15	-1.6
2,784,490	+		LRK54_RS12485	0.15	+0.7
2,784,490	+		LRK54_RS12485	0.15	-0.6
2,784,490	+		LRK54_RS12485	0.15	-0.5
2,784,491	-		LRK54_RS12485	0.15	-1.6
2,784,491	-		LRK54_RS12485	0.15	-0.4
2,784,491	-		LRK54_RS12485	0.15	-0.3
2,784,491	-		LRK54_RS12485	0.15	+0.2
2,784,491	-		LRK54_RS12485	0.15	+0.6
2,784,491	-		LRK54_RS12485	0.15	+1.4
2,784,491	-		LRK54_RS12485	0.15	+1.3
2,784,491	-		LRK54_RS12485	0.15	-1.3
2,784,491	-		LRK54_RS12485	0.15	+0.1
2,784,491	-		LRK54_RS12485	0.15	+0.3
2,784,491	-		LRK54_RS12485	0.15	+0.2
2,784,491	-		LRK54_RS12485	0.15	+0.1
2,784,491	-		LRK54_RS12485	0.15	+0.6
2,784,491	-		LRK54_RS12485	0.15	-0.2
2,784,491	-		LRK54_RS12485	0.15	-0.3
2,784,491	-		LRK54_RS12485	0.15	+1.2
2,784,491	-		LRK54_RS12485	0.15	+0.7
2,784,491	-		LRK54_RS12485	0.15	+0.4
2,784,491	-		LRK54_RS12485	0.15	-0.3
2,784,491	-		LRK54_RS12485	0.15	+0.1
2,784,491	-		LRK54_RS12485	0.15	+0.7
2,784,491	-		LRK54_RS12485	0.15	+2.2
2,784,491	-		LRK54_RS12485	0.15	-0.2
2,784,491	-		LRK54_RS12485	0.15	+0.7
2,784,491	-		LRK54_RS12485	0.15	-0.4
2,784,491	-		LRK54_RS12485	0.15	+0.8
2,784,491	-		LRK54_RS12485	0.15	-0.4
2,784,491	-		LRK54_RS12485	0.15	-0.6
2,784,491	-		LRK54_RS12485	0.15	+1.0
2,784,491	-		LRK54_RS12485	0.15	+0.4
2,784,724	+		LRK54_RS12485	0.31	+0.4
2,784,724	+		LRK54_RS12485	0.31	+0.4
2,784,724	+		LRK54_RS12485	0.31	-1.6
2,784,724	+		LRK54_RS12485	0.31	-0.1
2,784,724	+		LRK54_RS12485	0.31	+2.9
2,784,724	+		LRK54_RS12485	0.31	-0.9
2,784,725	-		LRK54_RS12485	0.31	+0.1
2,784,725	-		LRK54_RS12485	0.31	-0.1
2,784,725	-		LRK54_RS12485	0.31	+2.8
2,784,725	-		LRK54_RS12485	0.31	-0.0
2,784,725	-		LRK54_RS12485	0.31	-0.8
2,784,725	-		LRK54_RS12485	0.31	+0.5
2,784,725	-		LRK54_RS12485	0.31	-1.1
2,784,725	-		LRK54_RS12485	0.31	-0.1
2,784,725	-		LRK54_RS12485	0.31	+0.3
2,784,886	+		LRK54_RS12485	0.41	+0.4
2,784,886	+		LRK54_RS12485	0.41	+0.3
2,784,887	-		LRK54_RS12485	0.41	+0.4
2,784,887	-		LRK54_RS12485	0.41	+0.8
2,784,887	-		LRK54_RS12485	0.41	+0.6
2,784,887	-		LRK54_RS12485	0.41	-0.4
2,784,887	-		LRK54_RS12485	0.41	+0.9
2,784,887	-		LRK54_RS12485	0.41	-0.1
2,784,887	-		LRK54_RS12485	0.41	+0.6
2,784,887	-		LRK54_RS12485	0.41	+0.2
2,784,916	+		LRK54_RS12485	0.43	+2.5
2,784,916	+		LRK54_RS12485	0.43	+0.8
2,784,916	+		LRK54_RS12485	0.43	+1.9
2,784,916	+		LRK54_RS12485	0.43	+1.8
2,784,916	+		LRK54_RS12485	0.43	+0.3
2,784,916	+		LRK54_RS12485	0.43	-0.5
2,784,916	+		LRK54_RS12485	0.43	+0.4
2,784,916	+		LRK54_RS12485	0.43	+0.4
2,784,916	+		LRK54_RS12485	0.43	-0.4
2,784,916	+		LRK54_RS12485	0.43	+0.8
2,784,916	+		LRK54_RS12485	0.43	+0.5
2,784,917	-		LRK54_RS12485	0.43	-0.0
2,784,917	-		LRK54_RS12485	0.43	-0.2
2,784,917	-		LRK54_RS12485	0.43	+0.6
2,784,917	-		LRK54_RS12485	0.43	+0.2
2,784,917	-		LRK54_RS12485	0.43	+0.7
2,784,917	-		LRK54_RS12485	0.43	-0.6
2,784,917	-		LRK54_RS12485	0.43	+0.2
2,784,917	-		LRK54_RS12485	0.43	+1.3
2,784,917	-		LRK54_RS12485	0.43	-0.5
2,784,917	-		LRK54_RS12485	0.43	-0.1
2,784,917	-		LRK54_RS12485	0.43	-0.4
2,784,917	-		LRK54_RS12485	0.43	+0.5
2,784,917	-		LRK54_RS12485	0.43	+0.6
2,784,940	+		LRK54_RS12485	0.45	-0.8
2,784,940	+		LRK54_RS12485	0.45	+0.5
2,784,940	+		LRK54_RS12485	0.45	+0.6
2,784,940	+		LRK54_RS12485	0.45	-1.7
2,784,940	+		LRK54_RS12485	0.45	+0.6
2,784,941	-		LRK54_RS12485	0.45	+0.4
2,784,941	-		LRK54_RS12485	0.45	+0.2
2,784,941	-		LRK54_RS12485	0.45	+0.0
2,784,941	-		LRK54_RS12485	0.45	-0.4
2,784,941	-		LRK54_RS12485	0.45	-0.7
2,784,941	-		LRK54_RS12485	0.45	+0.3
2,784,941	-		LRK54_RS12485	0.45	-0.1
2,785,192	+		LRK54_RS12485	0.61	+0.3
2,785,192	+		LRK54_RS12485	0.61	-0.3
2,785,192	+		LRK54_RS12485	0.61	+0.2
2,785,192	+		LRK54_RS12485	0.61	+0.9
2,785,192	+		LRK54_RS12485	0.61	+0.2
2,785,192	+		LRK54_RS12485	0.61	-0.1
2,785,193	-		LRK54_RS12485	0.61	+0.4
2,785,193	-		LRK54_RS12485	0.61	+1.3
2,785,246	+		LRK54_RS12485	0.65	+1.2
2,785,246	+		LRK54_RS12485	0.65	+0.1
2,785,246	+		LRK54_RS12485	0.65	-0.6
2,785,246	+		LRK54_RS12485	0.65	+0.4
2,785,246	+		LRK54_RS12485	0.65	-0.4
2,785,246	+		LRK54_RS12485	0.65	+0.6
2,785,246	+		LRK54_RS12485	0.65	+1.4
2,785,246	+		LRK54_RS12485	0.65	-0.6
2,785,246	+		LRK54_RS12485	0.65	+0.7
2,785,247	-		LRK54_RS12485	0.65	+0.7
2,785,247	-		LRK54_RS12485	0.65	+0.1
2,785,247	-		LRK54_RS12485	0.65	+0.7
2,785,247	-		LRK54_RS12485	0.65	-0.9
2,785,247	-		LRK54_RS12485	0.65	+1.8
2,785,247	-		LRK54_RS12485	0.65	+1.4
2,785,247	-		LRK54_RS12485	0.65	-0.2
2,785,247	-		LRK54_RS12485	0.65	-1.3
2,785,247	-		LRK54_RS12485	0.65	+0.1
2,785,247	-		LRK54_RS12485	0.65	+0.1