Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS16220

Experiment: Trans-2-methyl-2-butenoic (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Trans-2-methyl-2-butenoic (C)
3,429,503	+				-0.1
3,429,503	+				-0.4
3,429,503	+				-0.2
3,429,503	+				-0.8
3,429,504	-				-0.8
3,429,504	-				+0.0
3,429,504	-				-0.3
3,429,515	+		ABZR87_RS16210	0.11	-0.0
3,429,515	+		ABZR87_RS16210	0.11	-0.4
3,429,515	+		ABZR87_RS16210	0.11	+0.9
3,429,516	-		ABZR87_RS16210	0.12	-0.4
3,429,608	+		ABZR87_RS16210	0.49	+0.2
3,429,608	+		ABZR87_RS16210	0.49	-0.0
3,429,608	+		ABZR87_RS16210	0.49	-0.3
3,429,609	-		ABZR87_RS16210	0.50	-0.1
3,429,609	-		ABZR87_RS16210	0.50	+0.0
3,429,609	-		ABZR87_RS16210	0.50	+0.0
3,429,820	+		ABZR87_RS16215	0.14	-0.1
3,429,982	+		ABZR87_RS16215	0.38	+0.4
3,429,983	-		ABZR87_RS16215	0.38	-0.4
3,429,983	-		ABZR87_RS16215	0.38	+0.1
3,430,111	+		ABZR87_RS16215	0.57	-0.7
3,430,111	+		ABZR87_RS16215	0.57	+0.0
3,430,111	+		ABZR87_RS16215	0.57	+0.1
3,430,111	+		ABZR87_RS16215	0.57	-0.6
3,430,111	+		ABZR87_RS16215	0.57	-0.1
3,430,111	+		ABZR87_RS16215	0.57	-0.5
3,430,111	+		ABZR87_RS16215	0.57	-1.2
3,430,112	-		ABZR87_RS16215	0.57	+0.0
3,430,112	-		ABZR87_RS16215	0.57	-0.8
3,430,112	-		ABZR87_RS16215	0.57	-1.8
3,430,112	-		ABZR87_RS16215	0.57	+0.2
3,430,112	-		ABZR87_RS16215	0.57	+0.0
3,430,120	+		ABZR87_RS16215	0.58	-0.1
3,430,121	-		ABZR87_RS16215	0.59	-0.4
3,430,121	-		ABZR87_RS16215	0.59	-0.9
3,430,177	+		ABZR87_RS16215	0.67	+0.2
3,430,178	-		ABZR87_RS16215	0.67	+0.0
3,430,415	+				+0.5
3,430,415	+				-0.4
3,430,416	-				+0.3
3,430,479	-				-0.2
3,430,484	+				+0.3
3,430,484	+				+0.4
3,430,485	-				+0.3
3,430,485	-				-0.1
3,430,485	-				-0.6
3,430,485	-				-0.2
3,430,485	-				-0.2
3,430,542	-				+0.1
3,430,542	-				+0.3
3,430,544	+				-0.2
3,430,544	+				-0.1
3,430,544	+				-0.1
3,430,544	+				+0.2
3,430,544	+				-0.7
3,430,545	-				-0.1
3,430,545	-				+0.1
3,430,793	+		ABZR87_RS16220	0.13	-0.4
3,430,794	-		ABZR87_RS16220	0.13	+0.0
3,430,794	-		ABZR87_RS16220	0.13	-0.7
3,430,838	+		ABZR87_RS16220	0.14	-0.6
3,430,839	-		ABZR87_RS16220	0.14	-0.1
3,430,839	-		ABZR87_RS16220	0.14	-0.3
3,430,854	+		ABZR87_RS16220	0.15	-0.1
3,430,877	+		ABZR87_RS16220	0.15	-0.5
3,430,877	+		ABZR87_RS16220	0.15	+0.1
3,430,877	+		ABZR87_RS16220	0.15	+0.2
3,430,878	-		ABZR87_RS16220	0.15	+0.1
3,430,878	-		ABZR87_RS16220	0.15	-0.6
3,430,878	-		ABZR87_RS16220	0.15	+0.2
3,430,925	+		ABZR87_RS16220	0.17	-1.0
3,430,926	-		ABZR87_RS16220	0.17	-0.4
3,430,955	+		ABZR87_RS16220	0.18	-0.6
3,431,306	+		ABZR87_RS16220	0.30	-0.4
3,431,307	-		ABZR87_RS16220	0.30	-0.4
3,431,372	+		ABZR87_RS16220	0.32	-0.4
3,431,372	+		ABZR87_RS16220	0.32	-0.6
3,431,579	+		ABZR87_RS16220	0.39	-0.4
3,431,579	+		ABZR87_RS16220	0.39	+0.4
3,431,579	+		ABZR87_RS16220	0.39	+0.2
3,431,579	+		ABZR87_RS16220	0.39	-0.0
3,431,580	-		ABZR87_RS16220	0.39	-0.5
3,431,768	+		ABZR87_RS16220	0.45	-0.1
3,431,768	+		ABZR87_RS16220	0.45	+0.5
3,431,769	-		ABZR87_RS16220	0.45	+0.4
3,431,769	-		ABZR87_RS16220	0.45	-1.0
3,431,769	-		ABZR87_RS16220	0.45	-0.2
3,431,933	+		ABZR87_RS16220	0.51	-0.2
3,431,933	+		ABZR87_RS16220	0.51	-0.2
3,431,934	-		ABZR87_RS16220	0.51	-0.6
3,431,934	-		ABZR87_RS16220	0.51	-0.0
3,432,068	+		ABZR87_RS16220	0.55	-0.6
3,432,068	+		ABZR87_RS16220	0.55	-1.1
3,432,122	+		ABZR87_RS16220	0.57	+0.1
3,432,122	+		ABZR87_RS16220	0.57	+0.5
3,432,123	-		ABZR87_RS16220	0.57	-0.2
3,432,123	-		ABZR87_RS16220	0.57	-1.8
3,432,195	+		ABZR87_RS16220	0.59	-0.0
3,432,196	-		ABZR87_RS16220	0.59	-0.4
3,432,196	-		ABZR87_RS16220	0.59	+1.2
3,432,222	+		ABZR87_RS16220	0.60	-0.7
3,432,223	-		ABZR87_RS16220	0.60	-0.5
3,432,441	-		ABZR87_RS16220	0.67	-0.6
3,432,441	-		ABZR87_RS16220	0.67	-0.2
3,432,441	-		ABZR87_RS16220	0.67	+0.3
3,432,458	+		ABZR87_RS16220	0.68	-0.4
3,432,458	+		ABZR87_RS16220	0.68	+0.0
3,432,458	+		ABZR87_RS16220	0.68	-0.4
3,432,458	+		ABZR87_RS16220	0.68	-0.3
3,432,458	+		ABZR87_RS16220	0.68	+0.2
3,432,458	+		ABZR87_RS16220	0.68	-0.6
3,432,458	+		ABZR87_RS16220	0.68	-0.3
3,432,458	+		ABZR87_RS16220	0.68	-0.4
3,432,459	-		ABZR87_RS16220	0.68	-0.3
3,432,459	-		ABZR87_RS16220	0.68	+0.1
3,432,459	-		ABZR87_RS16220	0.68	-0.3
3,432,459	-		ABZR87_RS16220	0.68	-0.1
3,432,494	+		ABZR87_RS16220	0.69	+0.3
3,432,494	+		ABZR87_RS16220	0.69	-1.0
3,432,494	+		ABZR87_RS16220	0.69	+0.7
3,432,494	+		ABZR87_RS16220	0.69	+0.1
3,432,494	+		ABZR87_RS16220	0.69	-0.4
3,432,495	-		ABZR87_RS16220	0.69	-0.3
3,432,495	-		ABZR87_RS16220	0.69	-0.2
3,432,495	-		ABZR87_RS16220	0.69	+0.0
3,432,495	-		ABZR87_RS16220	0.69	-0.3
3,432,545	+		ABZR87_RS16220	0.71	-1.2
3,432,545	+		ABZR87_RS16220	0.71	+0.1
3,432,545	+		ABZR87_RS16220	0.71	-0.4
3,432,546	-		ABZR87_RS16220	0.71	-1.2
3,432,546	-		ABZR87_RS16220	0.71	-0.6
3,432,546	-		ABZR87_RS16220	0.71	-0.6
3,432,546	-		ABZR87_RS16220	0.71	-0.0
3,432,546	-		ABZR87_RS16220	0.71	+0.1
3,432,573	+		ABZR87_RS16220	0.72	-0.3
3,432,573	+		ABZR87_RS16220	0.72	-0.1
3,432,573	+		ABZR87_RS16220	0.72	-0.5
3,432,575	+		ABZR87_RS16220	0.72	+0.1
3,432,576	-		ABZR87_RS16220	0.72	-0.2
3,432,576	-		ABZR87_RS16220	0.72	-0.4
3,432,674	+		ABZR87_RS16220	0.75	-0.6
3,432,674	+		ABZR87_RS16220	0.75	-0.9
3,432,675	-		ABZR87_RS16220	0.75	+0.2
3,432,675	-		ABZR87_RS16220	0.75	-0.5
3,432,707	+		ABZR87_RS16220	0.76	-0.5
3,432,707	+		ABZR87_RS16220	0.76	-0.5
3,432,707	+		ABZR87_RS16220	0.76	-0.1
3,432,707	+		ABZR87_RS16220	0.76	-0.0
3,432,708	-		ABZR87_RS16220	0.76	+0.1
3,432,708	-		ABZR87_RS16220	0.76	-0.4
3,432,728	+		ABZR87_RS16220	0.77	-0.3
3,432,729	-		ABZR87_RS16220	0.77	-0.9
3,432,833	+		ABZR87_RS16220	0.80	+0.2
3,432,833	+		ABZR87_RS16220	0.80	-1.5
3,432,833	+		ABZR87_RS16220	0.80	+0.1
3,432,833	+		ABZR87_RS16220	0.80	-0.8
3,432,834	-		ABZR87_RS16220	0.81	+0.1
3,432,834	-		ABZR87_RS16220	0.81	+0.2
3,432,999	-		ABZR87_RS16220	0.86	-0.3
3,432,999	-		ABZR87_RS16220	0.86	-0.6
3,433,159	+				-0.1
3,433,160	-				-0.7
3,433,394	-				-0.7
3,433,394	-				-0.2
3,433,506	+				+0.2
3,433,506	+				-1.2
3,433,506	+				+0.0
3,433,506	+				-0.6
3,433,507	-				+0.4
3,433,507	-				-0.8
3,433,507	-				-1.6
3,433,507	-				+1.0
3,433,507	-				-1.3
3,433,507	-				-0.5
3,433,509	+				-0.3
3,433,509	+				-0.2
3,433,509	+				-0.4
3,433,509	+				-0.2
3,433,509	+				-0.5
3,433,509	+				-0.7
3,433,510	-				-0.6
3,433,510	-				-0.4
3,433,577	-		ABZR87_RS16225	0.35	-0.1
3,433,577	-		ABZR87_RS16225	0.35	-0.8
3,433,781	+				-1.5
3,433,781	+				+0.0
3,433,782	-				+0.9
3,433,784	+				-0.4
3,433,805	+				-1.6
3,433,806	-				-0.5
3,433,806	-				+0.2
3,433,868	+				-0.2
3,433,868	+				-0.6
3,433,869	-				+0.6
3,433,869	-				+0.5
3,434,043	+				-0.7
3,434,043	+				+0.4
3,434,043	+				-2.4
3,434,043	+				-0.6
3,434,044	-		ABZR87_RS16230	0.10	-0.3
3,434,044	-		ABZR87_RS16230	0.10	+0.3
3,434,044	-		ABZR87_RS16230	0.10	-1.6
3,434,069	+		ABZR87_RS16230	0.14	-0.9
3,434,069	+		ABZR87_RS16230	0.14	-1.2
3,434,069	+		ABZR87_RS16230	0.14	-0.3
3,434,069	+		ABZR87_RS16230	0.14	-0.3
3,434,070	-		ABZR87_RS16230	0.14	-2.3
3,434,070	-		ABZR87_RS16230	0.14	-0.2
3,434,070	-		ABZR87_RS16230	0.14	-1.9
3,434,087	-		ABZR87_RS16230	0.17	+1.1
3,434,172	+		ABZR87_RS16230	0.29	-0.7
3,434,173	-		ABZR87_RS16230	0.29	+0.7
3,434,173	-		ABZR87_RS16230	0.29	-0.9
3,434,173	-		ABZR87_RS16230	0.29	-0.2
3,434,173	-		ABZR87_RS16230	0.29	-0.6
3,434,304	+		ABZR87_RS16230	0.49	-0.2
3,434,304	+		ABZR87_RS16230	0.49	+0.0
3,434,304	+		ABZR87_RS16230	0.49	-0.1
3,434,304	+		ABZR87_RS16230	0.49	-0.2
3,434,305	-		ABZR87_RS16230	0.49	-0.1
3,434,305	-		ABZR87_RS16230	0.49	-0.5
3,434,305	-		ABZR87_RS16230	0.49	+0.3
3,434,305	-		ABZR87_RS16230	0.49	-0.2
3,434,307	+		ABZR87_RS16230	0.49	-0.4
3,434,308	-		ABZR87_RS16230	0.49	-0.1
3,434,308	-		ABZR87_RS16230	0.49	+0.4
3,434,308	-		ABZR87_RS16230	0.49	+0.3
3,434,308	-		ABZR87_RS16230	0.49	+0.3
3,434,308	-		ABZR87_RS16230	0.49	-0.5
3,434,316	+		ABZR87_RS16230	0.51	-0.1
3,434,317	-		ABZR87_RS16230	0.51	+0.1
3,434,317	-		ABZR87_RS16230	0.51	-1.5
3,434,317	-		ABZR87_RS16230	0.51	-0.0
3,434,361	+		ABZR87_RS16230	0.57	-0.5
3,434,361	+		ABZR87_RS16230	0.57	-0.4
3,434,361	+		ABZR87_RS16230	0.57	-0.2
3,434,362	-		ABZR87_RS16230	0.57	-1.7