Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_002971

Experiment: D-Alanine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Alanine (C)
3,362,383	-		ABIE53_002969	0.59	-0.3
3,362,426	+		ABIE53_002969	0.70	-0.1
3,362,426	+		ABIE53_002969	0.70	+0.1
3,362,426	+		ABIE53_002969	0.70	-1.5
3,362,427	-		ABIE53_002969	0.71	-0.5
3,362,427	-		ABIE53_002969	0.71	-0.1
3,362,427	-		ABIE53_002969	0.71	-0.9
3,362,427	-		ABIE53_002969	0.71	-0.5
3,362,427	-		ABIE53_002969	0.71	-0.1
3,362,427	-		ABIE53_002969	0.71	-1.4
3,362,427	-		ABIE53_002969	0.71	-0.3
3,362,427	-		ABIE53_002969	0.71	-0.6
3,362,427	-		ABIE53_002969	0.71	+1.5
3,362,427	-		ABIE53_002969	0.71	-1.8
3,362,589	+				+0.6
3,362,589	+				+0.3
3,362,590	-				-0.5
3,362,590	-				+1.7
3,362,590	-				+0.1
3,362,590	-				+0.1
3,362,605	+				+0.5
3,362,605	+				-0.1
3,362,605	+				-0.9
3,362,605	+				+0.3
3,362,606	-				-0.2
3,362,606	-				-0.5
3,362,606	-				+1.7
3,362,636	+				+0.1
3,362,636	+				-0.2
3,362,636	+				-0.1
3,362,636	+				+1.1
3,362,636	+				-0.5
3,362,636	+				+0.9
3,362,636	+				-0.0
3,362,636	+				-0.3
3,362,637	-				+0.3
3,362,637	-				-0.6
3,362,637	-				-1.4
3,362,637	-				+0.9
3,362,637	-				+0.3
3,362,637	-				+0.9
3,362,637	-				-0.3
3,362,637	-				+0.5
3,362,637	-				-1.0
3,362,637	-				-0.2
3,362,637	-				-0.8
3,362,677	+				-0.0
3,362,677	+				+0.1
3,362,677	+				-0.2
3,362,677	+				+0.2
3,362,677	+				+0.5
3,362,678	-				-0.7
3,362,678	-				-0.9
3,362,740	-		ABIE53_002970	0.14	-0.7
3,362,744	+		ABIE53_002970	0.15	+2.5
3,362,744	+		ABIE53_002970	0.15	-0.3
3,362,744	+		ABIE53_002970	0.15	+0.3
3,362,744	+		ABIE53_002970	0.15	+0.1
3,362,745	-		ABIE53_002970	0.15	+0.5
3,362,745	-		ABIE53_002970	0.15	+0.7
3,362,745	-		ABIE53_002970	0.15	-0.5
3,362,745	-		ABIE53_002970	0.15	+1.9
3,362,745	-		ABIE53_002970	0.15	-0.0
3,362,745	-		ABIE53_002970	0.15	-2.2
3,362,745	-		ABIE53_002970	0.15	-0.3
3,362,776	+		ABIE53_002970	0.24	-0.5
3,362,776	+		ABIE53_002970	0.24	-0.3
3,362,776	+		ABIE53_002970	0.24	+0.6
3,362,776	+		ABIE53_002970	0.24	-0.4
3,362,777	-		ABIE53_002970	0.24	+0.0
3,362,777	-		ABIE53_002970	0.24	+0.5
3,362,777	-		ABIE53_002970	0.24	+1.5
3,362,777	-		ABIE53_002970	0.24	+1.6
3,362,777	-		ABIE53_002970	0.24	+0.4
3,362,777	-		ABIE53_002970	0.24	-0.0
3,362,788	+		ABIE53_002970	0.27	+1.2
3,362,932	-		ABIE53_002970	0.65	-1.6
3,363,037	+				+0.5
3,363,037	+				-0.2
3,363,037	+				-1.2
3,363,038	-				+1.1
3,363,038	-				-0.3
3,363,044	+				+1.2
3,363,045	-				-2.1
3,363,045	-				-0.3
3,363,045	-				-1.0
3,363,045	-				+0.5
3,363,045	-				+0.4
3,363,122	+				-0.3
3,363,122	+				-0.5
3,363,123	-				-0.5
3,363,123	-				-1.2
3,363,123	-				+1.7
3,363,123	-				-0.0
3,363,123	-				-0.5
3,363,123	-				-1.9
3,363,153	+				-0.9
3,363,153	+				-1.3
3,363,153	+				-0.9
3,363,153	+				-0.2
3,363,154	-				+0.7
3,363,154	-				-0.6
3,363,166	+				+1.1
3,363,166	+				-1.0
3,363,166	+				-0.4
3,363,166	+				-0.2
3,363,167	-				-0.2
3,363,167	-				+0.4
3,363,167	-				+0.1
3,363,167	-				+1.5
3,363,167	-				+0.1
3,363,167	-				-0.4
3,363,167	-				-1.0
3,363,167	-				-0.9
3,363,168	+				-1.2
3,363,169	-				-0.2
3,363,169	-				-0.5
3,363,184	+				+2.1
3,363,185	-				+1.5
3,363,337	-		ABIE53_002971	0.13	-1.3
3,363,369	+		ABIE53_002971	0.15	-0.5
3,363,369	+		ABIE53_002971	0.15	-0.6
3,363,369	+		ABIE53_002971	0.15	+0.5
3,363,369	+		ABIE53_002971	0.15	-0.8
3,363,370	-		ABIE53_002971	0.15	+0.5
3,363,370	-		ABIE53_002971	0.15	-0.4
3,363,370	-		ABIE53_002971	0.15	-0.2
3,363,370	-		ABIE53_002971	0.15	-0.6
3,363,380	+		ABIE53_002971	0.16	-0.7
3,363,380	+		ABIE53_002971	0.16	+0.3
3,363,380	+		ABIE53_002971	0.16	+0.6
3,363,381	-		ABIE53_002971	0.16	+0.1
3,363,381	-		ABIE53_002971	0.16	+0.3
3,363,399	+		ABIE53_002971	0.17	+0.3
3,363,399	+		ABIE53_002971	0.17	-0.2
3,363,399	+		ABIE53_002971	0.17	-0.5
3,363,400	-		ABIE53_002971	0.17	-0.6
3,363,400	-		ABIE53_002971	0.17	-0.0
3,363,400	-		ABIE53_002971	0.17	+1.1
3,363,400	-		ABIE53_002971	0.17	-0.3
3,363,400	-		ABIE53_002971	0.17	-0.2
3,363,400	-		ABIE53_002971	0.17	+0.2
3,363,400	-		ABIE53_002971	0.17	-0.6
3,363,400	-		ABIE53_002971	0.17	-0.3
3,363,525	+		ABIE53_002971	0.26	+0.1
3,363,525	+		ABIE53_002971	0.26	+2.1
3,363,525	+		ABIE53_002971	0.26	-0.4
3,363,525	+		ABIE53_002971	0.26	-0.2
3,363,526	-		ABIE53_002971	0.26	-1.1
3,363,526	-		ABIE53_002971	0.26	-0.1
3,363,526	-		ABIE53_002971	0.26	+0.9
3,363,729	+		ABIE53_002971	0.40	+1.4
3,363,729	+		ABIE53_002971	0.40	-0.5
3,363,729	+		ABIE53_002971	0.40	-1.1
3,363,729	+		ABIE53_002971	0.40	-1.4
3,363,738	+		ABIE53_002971	0.41	-1.1
3,363,738	+		ABIE53_002971	0.41	-0.4
3,363,738	+		ABIE53_002971	0.41	+1.2
3,363,738	+		ABIE53_002971	0.41	-1.0
3,363,739	-		ABIE53_002971	0.41	+0.5
3,363,739	-		ABIE53_002971	0.41	+0.3
3,363,739	-		ABIE53_002971	0.41	-0.4
3,363,739	-		ABIE53_002971	0.41	-0.9
3,363,739	-		ABIE53_002971	0.41	+1.5
3,363,750	+		ABIE53_002971	0.42	-1.1
3,363,756	+		ABIE53_002971	0.42	+1.8
3,363,756	+		ABIE53_002971	0.42	+0.9
3,363,756	+		ABIE53_002971	0.42	-0.0
3,363,756	+		ABIE53_002971	0.42	+0.3
3,363,757	-		ABIE53_002971	0.42	-0.6
3,363,757	-		ABIE53_002971	0.42	+0.2
3,363,757	-		ABIE53_002971	0.42	+1.5
3,363,757	-		ABIE53_002971	0.42	-0.4
3,363,757	-		ABIE53_002971	0.42	+0.3
3,364,044	+		ABIE53_002971	0.62	-0.5
3,364,044	+		ABIE53_002971	0.62	+0.7
3,364,044	+		ABIE53_002971	0.62	+0.1
3,364,044	+		ABIE53_002971	0.62	+0.3
3,364,045	-		ABIE53_002971	0.62	-0.2
3,364,045	-		ABIE53_002971	0.62	+1.5
3,364,077	+		ABIE53_002971	0.65	-0.7
3,364,077	+		ABIE53_002971	0.65	+1.5
3,364,078	-		ABIE53_002971	0.65	-0.2
3,364,078	-		ABIE53_002971	0.65	+0.9
3,364,078	-		ABIE53_002971	0.65	+0.1
3,364,273	-		ABIE53_002971	0.78	+0.1
3,364,273	-		ABIE53_002971	0.78	+1.3
3,364,418	+		ABIE53_002971	0.88	+0.3
3,364,418	+		ABIE53_002971	0.88	+0.5
3,364,419	-		ABIE53_002971	0.89	+0.6
3,364,582	+				+0.3
3,364,582	+				+1.1
3,364,582	+				-1.2
3,364,582	+				-0.2
3,364,583	-				+1.4
3,364,583	-				-0.5
3,364,622	+				-1.3
3,364,622	+				-0.5
3,364,623	-				+0.3
3,364,623	-				+0.6
3,364,633	+				+0.1
3,364,633	+				+2.3
3,364,633	+				-2.8
3,364,633	+				+0.1
3,364,633	+				+1.0
3,364,633	+				+2.0
3,364,633	+				-0.5
3,364,633	+				-0.1
3,364,633	+				-0.3
3,364,633	+				-0.6
3,364,633	+				+0.6
3,364,633	+				-0.8
3,364,633	+				-0.3
3,364,634	-				-0.3
3,364,634	-				+0.1
3,364,634	-				+0.5
3,364,634	-				-0.4
3,364,634	-				+0.7
3,364,634	-				+0.0
3,364,634	-				+0.3
3,364,634	-				+0.2
3,364,687	+				-1.7
3,364,694	+				-2.1
3,364,694	+				-0.5
3,364,694	+				-0.2
3,364,694	+				-0.6
3,364,694	+				-0.4
3,364,694	+				+1.2
3,364,695	-				-0.3
3,364,695	-				+0.1
3,364,695	-				+0.9
3,364,793	+				-1.1
3,364,793	+				-1.8
3,364,794	-				-0.4
3,364,794	-				-1.9
3,364,794	-				-0.5
3,364,845	+				-0.3
3,364,846	-				-2.0
3,364,853	+				-0.7
3,364,853	+				+0.2
3,364,854	-				+1.1
3,364,854	-				-0.7
3,364,854	-				-0.6
3,364,854	-				-0.1
3,364,854	-				-1.0
3,364,949	+				+0.2
3,364,950	-				-0.2
3,364,950	-				-0.5
3,365,186	+		ABIE53_002972	0.25	-0.9
3,365,186	+		ABIE53_002972	0.25	-0.7
3,365,186	+		ABIE53_002972	0.25	-0.8
3,365,186	+		ABIE53_002972	0.25	-2.0
3,365,187	-		ABIE53_002972	0.25	+1.0
3,365,187	-		ABIE53_002972	0.25	-2.3
3,365,187	-		ABIE53_002972	0.25	-0.7
3,365,198	+		ABIE53_002972	0.25	+0.5
3,365,198	+		ABIE53_002972	0.25	-0.4
3,365,199	-		ABIE53_002972	0.26	-0.0
3,365,283	-		ABIE53_002972	0.31	-0.5
3,365,304	+		ABIE53_002972	0.32	-0.5
3,365,304	+		ABIE53_002972	0.32	-0.3
3,365,305	-		ABIE53_002972	0.32	+0.7
3,365,330	+		ABIE53_002972	0.34	-1.2
3,365,330	+		ABIE53_002972	0.34	-1.1
3,365,330	+		ABIE53_002972	0.34	-1.1
3,365,331	-		ABIE53_002972	0.34	-0.3
3,365,331	-		ABIE53_002972	0.34	-0.6
3,365,331	-		ABIE53_002972	0.34	+0.0
3,365,331	-		ABIE53_002972	0.34	-1.2
3,365,331	-		ABIE53_002972	0.34	+0.5
3,365,331	-		ABIE53_002972	0.34	+0.7
3,365,417	+		ABIE53_002972	0.39	-0.4