Experiment: Glycerol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS21100 and HSERO_RS21105 are separated by 86 nucleotides HSERO_RS21105 and HSERO_RS21110 are separated by 48 nucleotides HSERO_RS21110 and HSERO_RS21115 are separated by 98 nucleotides HSERO_RS21115 and HSERO_RS21120 overlap by 4 nucleotides
HSERO_RS21100: HSERO_RS21100 - UDP-N-acetylglucosamine 2-epimerase, at 4,826,977 to 4,828,107
_RS21100
HSERO_RS21105: HSERO_RS21105 - UDP-phosphate galactose phosphotransferase, at 4,828,194 to 4,828,754
_RS21105
HSERO_RS21110: HSERO_RS21110 - dTDP-glucose 4,6-dehydratase, at 4,828,803 to 4,830,749
_RS21110
HSERO_RS21115: HSERO_RS21115 - flagellar motor protein, at 4,830,848 to 4,831,600
_RS21115
HSERO_RS21120: HSERO_RS21120 - hypothetical protein, at 4,831,597 to 4,832,286
_RS21120
Position (kb) 4828
4829
4830
4831 Strain fitness (log2 ratio) -2
-1
0
1
2 at 4827.816 kb on - strand, within HSERO_RS21100 at 4827.923 kb on - strand, within HSERO_RS21100 at 4828.019 kb on - strand at 4828.130 kb on + strand at 4828.428 kb on - strand, within HSERO_RS21105 at 4828.777 kb on + strand at 4828.777 kb on + strand at 4828.777 kb on + strand at 4828.785 kb on - strand at 4828.785 kb on - strand at 4828.794 kb on - strand at 4829.268 kb on - strand, within HSERO_RS21110 at 4829.366 kb on - strand, within HSERO_RS21110 at 4829.439 kb on - strand, within HSERO_RS21110 at 4829.518 kb on - strand, within HSERO_RS21110 at 4829.589 kb on - strand, within HSERO_RS21110 at 4829.649 kb on - strand, within HSERO_RS21110 at 4829.692 kb on + strand, within HSERO_RS21110 at 4829.953 kb on + strand, within HSERO_RS21110 at 4830.125 kb on - strand, within HSERO_RS21110 at 4830.185 kb on - strand, within HSERO_RS21110 at 4830.185 kb on - strand, within HSERO_RS21110 at 4830.256 kb on - strand, within HSERO_RS21110 at 4830.515 kb on + strand, within HSERO_RS21110 at 4830.522 kb on - strand, within HSERO_RS21110 at 4830.523 kb on - strand, within HSERO_RS21110 at 4830.597 kb on + strand at 4830.703 kb on + strand at 4830.792 kb on - strand at 4831.012 kb on - strand, within HSERO_RS21115 at 4831.043 kb on + strand, within HSERO_RS21115 at 4831.102 kb on - strand, within HSERO_RS21115 at 4831.317 kb on - strand, within HSERO_RS21115 at 4831.573 kb on - strand at 4831.622 kb on + strand at 4831.650 kb on - strand at 4831.688 kb on + strand, within HSERO_RS21120 at 4831.703 kb on + strand, within HSERO_RS21120
Per-strain Table
Position Strand Gene LocusTag Fraction Glycerol (C) remove 4,827,816 - HSERO_RS21100 0.74 -1.1 4,827,923 - HSERO_RS21100 0.84 -0.3 4,828,019 - -1.4 4,828,130 + +1.5 4,828,428 - HSERO_RS21105 0.42 -1.8 4,828,777 + -0.1 4,828,777 + -0.2 4,828,777 + +0.3 4,828,785 - +0.0 4,828,785 - +0.1 4,828,794 - +0.8 4,829,268 - HSERO_RS21110 0.24 -0.2 4,829,366 - HSERO_RS21110 0.29 +1.6 4,829,439 - HSERO_RS21110 0.33 +1.9 4,829,518 - HSERO_RS21110 0.37 +0.4 4,829,589 - HSERO_RS21110 0.40 +1.3 4,829,649 - HSERO_RS21110 0.43 +0.4 4,829,692 + HSERO_RS21110 0.46 +0.6 4,829,953 + HSERO_RS21110 0.59 +0.9 4,830,125 - HSERO_RS21110 0.68 +0.8 4,830,185 - HSERO_RS21110 0.71 +2.3 4,830,185 - HSERO_RS21110 0.71 +0.9 4,830,256 - HSERO_RS21110 0.75 +0.8 4,830,515 + HSERO_RS21110 0.88 +1.4 4,830,522 - HSERO_RS21110 0.88 -0.3 4,830,523 - HSERO_RS21110 0.88 +0.8 4,830,597 + +0.9 4,830,703 + +0.6 4,830,792 - -0.3 4,831,012 - HSERO_RS21115 0.22 -0.2 4,831,043 + HSERO_RS21115 0.26 -1.8 4,831,102 - HSERO_RS21115 0.34 +0.3 4,831,317 - HSERO_RS21115 0.62 +0.7 4,831,573 - -0.4 4,831,622 + -0.3 4,831,650 - -0.0 4,831,688 + HSERO_RS21120 0.13 +0.0 4,831,703 + HSERO_RS21120 0.15 +0.7
Or see this region's nucleotide sequence