Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_29410 and AO356_29415 are separated by 88 nucleotides AO356_29415 and AO356_29420 are separated by 135 nucleotides AO356_29420 and AO356_29425 are separated by 198 nucleotides AO356_29425 and AO356_29430 are separated by 35 nucleotides
AO356_29410: AO356_29410 - hypothetical protein, at 6,842,595 to 6,842,975
_29410
AO356_29415: AO356_29415 - transketolase, at 6,843,064 to 6,843,522
_29415
AO356_29420: AO356_29420 - 1-aminocyclopropane-1-carboxylate deaminase, at 6,843,658 to 6,844,674
_29420
AO356_29425: AO356_29425 - AsnC family transcriptional regulator, at 6,844,873 to 6,845,382
_29425
AO356_29430: AO356_29430 - histidine kinase, at 6,845,418 to 6,849,140
_29430
Position (kb)
6843
6844
6845 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 6842.955 kb on - strand at 6842.955 kb on - strand at 6843.018 kb on - strand at 6843.380 kb on + strand, within AO356_29415 at 6843.380 kb on + strand, within AO356_29415 at 6843.404 kb on - strand, within AO356_29415 at 6843.404 kb on - strand, within AO356_29415 at 6843.431 kb on + strand, within AO356_29415 at 6843.432 kb on - strand, within AO356_29415 at 6843.432 kb on - strand, within AO356_29415 at 6843.596 kb on + strand at 6843.639 kb on + strand at 6843.684 kb on - strand at 6843.720 kb on - strand at 6843.720 kb on - strand at 6843.853 kb on - strand, within AO356_29420 at 6844.176 kb on - strand, within AO356_29420 at 6844.297 kb on + strand, within AO356_29420 at 6844.297 kb on + strand, within AO356_29420 at 6844.297 kb on + strand, within AO356_29420 at 6844.297 kb on + strand, within AO356_29420 at 6844.506 kb on - strand, within AO356_29420 at 6844.656 kb on + strand at 6844.656 kb on + strand at 6844.771 kb on + strand at 6845.415 kb on + strand at 6845.427 kb on - strand at 6845.450 kb on + strand at 6845.450 kb on + strand at 6845.451 kb on - strand at 6845.459 kb on + strand at 6845.591 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 6,842,955 - +1.0 6,842,955 - +1.8 6,843,018 - +0.2 6,843,380 + AO356_29415 0.69 -0.3 6,843,380 + AO356_29415 0.69 -1.3 6,843,404 - AO356_29415 0.74 +0.6 6,843,404 - AO356_29415 0.74 -1.1 6,843,431 + AO356_29415 0.80 -2.6 6,843,432 - AO356_29415 0.80 -0.6 6,843,432 - AO356_29415 0.80 -0.5 6,843,596 + +0.2 6,843,639 + +0.9 6,843,684 - -0.1 6,843,720 - -1.4 6,843,720 - -0.8 6,843,853 - AO356_29420 0.19 -0.8 6,844,176 - AO356_29420 0.51 +0.8 6,844,297 + AO356_29420 0.63 +0.3 6,844,297 + AO356_29420 0.63 +0.2 6,844,297 + AO356_29420 0.63 -0.5 6,844,297 + AO356_29420 0.63 +0.2 6,844,506 - AO356_29420 0.83 +1.2 6,844,656 + -0.2 6,844,656 + -0.9 6,844,771 + +0.6 6,845,415 + -0.1 6,845,427 - +0.5 6,845,450 + +0.0 6,845,450 + -1.6 6,845,451 - -0.3 6,845,459 + +0.5 6,845,591 + +0.6
Or see this region's nucleotide sequence