Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_29400 and AO356_29405 are separated by 548 nucleotides AO356_29405 and AO356_29410 overlap by 4 nucleotides AO356_29410 and AO356_29415 are separated by 88 nucleotides
AO356_29400: AO356_29400 - peptidase M20, at 6,838,199 to 6,839,353
_29400
AO356_29405: AO356_29405 - alpha-ketoglutarate dehydrogenase, at 6,839,902 to 6,842,598
_29405
AO356_29410: AO356_29410 - hypothetical protein, at 6,842,595 to 6,842,975
_29410
AO356_29415: AO356_29415 - transketolase, at 6,843,064 to 6,843,522
_29415
Position (kb)
6839
6840
6841
6842
6843 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 6839.129 kb on + strand, within AO356_29400 at 6839.129 kb on + strand, within AO356_29400 at 6839.130 kb on - strand, within AO356_29400 at 6839.130 kb on - strand, within AO356_29400 at 6839.385 kb on + strand at 6839.386 kb on - strand at 6839.386 kb on - strand at 6839.402 kb on + strand at 6839.417 kb on + strand at 6839.417 kb on + strand at 6839.417 kb on + strand at 6839.418 kb on - strand at 6839.418 kb on - strand at 6839.422 kb on - strand at 6840.152 kb on + strand at 6840.428 kb on + strand, within AO356_29405 at 6840.428 kb on + strand, within AO356_29405 at 6840.429 kb on - strand, within AO356_29405 at 6840.429 kb on - strand, within AO356_29405 at 6840.429 kb on - strand, within AO356_29405 at 6840.506 kb on + strand, within AO356_29405 at 6840.506 kb on + strand, within AO356_29405 at 6840.507 kb on - strand, within AO356_29405 at 6840.509 kb on + strand, within AO356_29405 at 6840.510 kb on - strand, within AO356_29405 at 6840.594 kb on - strand, within AO356_29405 at 6840.594 kb on - strand, within AO356_29405 at 6840.770 kb on + strand, within AO356_29405 at 6840.774 kb on - strand, within AO356_29405 at 6840.779 kb on + strand, within AO356_29405 at 6840.779 kb on + strand, within AO356_29405 at 6840.779 kb on + strand, within AO356_29405 at 6840.780 kb on - strand, within AO356_29405 at 6840.780 kb on - strand, within AO356_29405 at 6840.805 kb on + strand, within AO356_29405 at 6840.805 kb on + strand, within AO356_29405 at 6840.805 kb on + strand, within AO356_29405 at 6840.954 kb on - strand, within AO356_29405 at 6840.954 kb on - strand, within AO356_29405 at 6841.127 kb on + strand, within AO356_29405 at 6841.127 kb on + strand, within AO356_29405 at 6841.127 kb on + strand, within AO356_29405 at 6841.128 kb on - strand, within AO356_29405 at 6841.135 kb on + strand, within AO356_29405 at 6841.136 kb on - strand, within AO356_29405 at 6841.184 kb on + strand, within AO356_29405 at 6841.185 kb on - strand, within AO356_29405 at 6841.416 kb on + strand, within AO356_29405 at 6841.416 kb on + strand, within AO356_29405 at 6841.417 kb on - strand, within AO356_29405 at 6841.651 kb on - strand, within AO356_29405 at 6842.037 kb on - strand, within AO356_29405 at 6842.165 kb on + strand, within AO356_29405 at 6842.252 kb on + strand, within AO356_29405 at 6842.397 kb on + strand at 6842.405 kb on + strand at 6842.405 kb on + strand at 6842.406 kb on - strand at 6842.406 kb on - strand at 6842.417 kb on + strand at 6842.417 kb on + strand at 6842.418 kb on - strand at 6842.599 kb on - strand at 6842.955 kb on - strand at 6842.955 kb on - strand at 6843.018 kb on - strand at 6843.380 kb on + strand, within AO356_29415 at 6843.380 kb on + strand, within AO356_29415 at 6843.404 kb on - strand, within AO356_29415 at 6843.404 kb on - strand, within AO356_29415 at 6843.431 kb on + strand, within AO356_29415 at 6843.432 kb on - strand, within AO356_29415 at 6843.432 kb on - strand, within AO356_29415 at 6843.596 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 6,839,129 + AO356_29400 0.81 +0.3 6,839,129 + AO356_29400 0.81 -1.4 6,839,130 - AO356_29400 0.81 -0.5 6,839,130 - AO356_29400 0.81 +0.0 6,839,385 + +0.2 6,839,386 - +0.0 6,839,386 - +0.2 6,839,402 + -1.4 6,839,417 + -1.3 6,839,417 + -0.8 6,839,417 + -0.8 6,839,418 - -0.0 6,839,418 - -0.3 6,839,422 - -0.3 6,840,152 + +0.0 6,840,428 + AO356_29405 0.20 -1.3 6,840,428 + AO356_29405 0.20 +0.4 6,840,429 - AO356_29405 0.20 -0.7 6,840,429 - AO356_29405 0.20 -0.4 6,840,429 - AO356_29405 0.20 +0.2 6,840,506 + AO356_29405 0.22 +1.2 6,840,506 + AO356_29405 0.22 +0.4 6,840,507 - AO356_29405 0.22 +0.1 6,840,509 + AO356_29405 0.23 +0.0 6,840,510 - AO356_29405 0.23 -0.5 6,840,594 - AO356_29405 0.26 +1.4 6,840,594 - AO356_29405 0.26 -0.2 6,840,770 + AO356_29405 0.32 +0.7 6,840,774 - AO356_29405 0.32 -0.4 6,840,779 + AO356_29405 0.33 -0.2 6,840,779 + AO356_29405 0.33 +1.2 6,840,779 + AO356_29405 0.33 +1.2 6,840,780 - AO356_29405 0.33 +0.7 6,840,780 - AO356_29405 0.33 +1.0 6,840,805 + AO356_29405 0.33 +0.4 6,840,805 + AO356_29405 0.33 -0.5 6,840,805 + AO356_29405 0.33 +1.0 6,840,954 - AO356_29405 0.39 -0.5 6,840,954 - AO356_29405 0.39 -0.2 6,841,127 + AO356_29405 0.45 -0.0 6,841,127 + AO356_29405 0.45 +0.0 6,841,127 + AO356_29405 0.45 +1.3 6,841,128 - AO356_29405 0.45 -0.1 6,841,135 + AO356_29405 0.46 +0.2 6,841,136 - AO356_29405 0.46 +0.9 6,841,184 + AO356_29405 0.48 +0.7 6,841,185 - AO356_29405 0.48 +0.2 6,841,416 + AO356_29405 0.56 -0.7 6,841,416 + AO356_29405 0.56 +0.0 6,841,417 - AO356_29405 0.56 +2.2 6,841,651 - AO356_29405 0.65 -0.5 6,842,037 - AO356_29405 0.79 -0.2 6,842,165 + AO356_29405 0.84 +0.6 6,842,252 + AO356_29405 0.87 -0.4 6,842,397 + +0.2 6,842,405 + +0.9 6,842,405 + +0.8 6,842,406 - +0.6 6,842,406 - +0.5 6,842,417 + +1.0 6,842,417 + +0.7 6,842,418 - -0.0 6,842,599 - +0.0 6,842,955 - +1.0 6,842,955 - +1.8 6,843,018 - +0.2 6,843,380 + AO356_29415 0.69 -0.3 6,843,380 + AO356_29415 0.69 -1.3 6,843,404 - AO356_29415 0.74 +0.6 6,843,404 - AO356_29415 0.74 -1.1 6,843,431 + AO356_29415 0.80 -2.6 6,843,432 - AO356_29415 0.80 -0.6 6,843,432 - AO356_29415 0.80 -0.5 6,843,596 + +0.2
Or see this region's nucleotide sequence