Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_27965
Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Thallium(I) acetate 0.008 mg/ml |
---|---|---|---|---|---|
remove | |||||
6,382,399 | + | -0.8 | |||
6,382,444 | + | +1.1 | |||
6,382,560 | + | +0.8 | |||
6,382,561 | - | +0.3 | |||
6,382,561 | - | +0.1 | |||
6,382,662 | + | AO356_27960 | 0.14 | -0.7 | |
6,382,815 | + | AO356_27960 | 0.34 | +1.1 | |
6,382,815 | + | AO356_27960 | 0.34 | -0.9 | |
6,382,816 | - | AO356_27960 | 0.34 | -0.6 | |
6,382,852 | - | AO356_27960 | 0.39 | +0.1 | |
6,383,046 | + | AO356_27960 | 0.64 | -0.1 | |
6,383,046 | + | AO356_27960 | 0.64 | -0.7 | |
6,383,046 | + | AO356_27960 | 0.64 | +1.5 | |
6,383,047 | - | AO356_27960 | 0.64 | -0.4 | |
6,383,448 | - | -1.0 | |||
6,384,186 | + | AO356_27965 | 0.54 | -0.4 | |
6,384,187 | - | AO356_27965 | 0.54 | -0.2 | |
6,384,866 | + | +0.1 | |||
6,384,866 | + | +2.2 | |||
6,384,866 | + | +0.5 | |||
6,384,866 | + | -0.1 | |||
6,384,867 | - | +0.4 | |||
6,384,867 | - | +0.4 | |||
6,385,094 | + | +0.8 | |||
6,385,095 | - | -1.6 | |||
6,385,095 | - | +1.1 | |||
6,385,101 | + | -0.1 | |||
6,385,156 | - | +0.1 | |||
6,385,156 | - | +0.6 | |||
6,385,299 | + | -0.3 | |||
6,385,299 | + | +1.4 | |||
6,385,577 | - | AO356_27970 | 0.24 | +1.1 | |
6,385,676 | - | AO356_27970 | 0.30 | -0.2 | |
6,385,816 | + | AO356_27970 | 0.38 | +0.1 |
Or see this region's nucleotide sequence