Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_27760 and AO356_27765 overlap by 4 nucleotides AO356_27765 and AO356_27770 are separated by 70 nucleotides AO356_27770 and AO356_27775 overlap by 4 nucleotides
AO356_27760: AO356_27760 - LysR family transcriptional regulator, at 6,338,663 to 6,339,571
_27760
AO356_27765: AO356_27765 - hypothetical protein, at 6,339,568 to 6,339,918
_27765
AO356_27770: AO356_27770 - hypothetical protein, at 6,339,989 to 6,340,417
_27770
AO356_27775: AO356_27775 - UDP pyrophosphate phosphatase, at 6,340,414 to 6,341,244
_27775
Position (kb)
6339
6340
6341 Strain fitness (log2 ratio)
-2
-1
0
1 at 6339.015 kb on - strand, within AO356_27760 at 6339.396 kb on - strand, within AO356_27760 at 6339.559 kb on + strand at 6339.560 kb on - strand at 6339.567 kb on + strand at 6339.631 kb on + strand, within AO356_27765 at 6339.631 kb on + strand, within AO356_27765 at 6339.632 kb on - strand, within AO356_27765 at 6339.885 kb on - strand at 6339.916 kb on + strand at 6339.917 kb on - strand at 6339.991 kb on - strand at 6340.056 kb on - strand, within AO356_27770 at 6340.056 kb on - strand, within AO356_27770 at 6340.221 kb on + strand, within AO356_27770 at 6340.222 kb on - strand, within AO356_27770 at 6340.508 kb on + strand, within AO356_27775 at 6340.626 kb on - strand, within AO356_27775 at 6340.640 kb on + strand, within AO356_27775 at 6340.640 kb on + strand, within AO356_27775 at 6340.701 kb on + strand, within AO356_27775 at 6340.922 kb on + strand, within AO356_27775 at 6340.922 kb on + strand, within AO356_27775 at 6340.923 kb on - strand, within AO356_27775 at 6341.204 kb on - strand at 6341.204 kb on - strand at 6341.281 kb on - strand at 6341.281 kb on - strand at 6341.281 kb on - strand at 6341.281 kb on - strand at 6341.305 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 6,339,015 - AO356_27760 0.39 -0.0 6,339,396 - AO356_27760 0.81 +0.9 6,339,559 + +0.1 6,339,560 - -2.0 6,339,567 + -0.5 6,339,631 + AO356_27765 0.18 -0.9 6,339,631 + AO356_27765 0.18 -0.3 6,339,632 - AO356_27765 0.18 +0.1 6,339,885 - +0.7 6,339,916 + +1.1 6,339,917 - +0.7 6,339,991 - +1.1 6,340,056 - AO356_27770 0.16 -0.3 6,340,056 - AO356_27770 0.16 -0.5 6,340,221 + AO356_27770 0.54 -0.5 6,340,222 - AO356_27770 0.54 -1.0 6,340,508 + AO356_27775 0.11 -1.1 6,340,626 - AO356_27775 0.26 -0.6 6,340,640 + AO356_27775 0.27 -0.6 6,340,640 + AO356_27775 0.27 +0.1 6,340,701 + AO356_27775 0.35 +0.9 6,340,922 + AO356_27775 0.61 -0.9 6,340,922 + AO356_27775 0.61 -0.5 6,340,923 - AO356_27775 0.61 +0.3 6,341,204 - +0.1 6,341,204 - +0.8 6,341,281 - -0.3 6,341,281 - +0.1 6,341,281 - +0.5 6,341,281 - -0.9 6,341,305 + -0.9
Or see this region's nucleotide sequence